RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 ZBTB5O15062 677 aa16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 FGBP02675 491 aa16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 NR3C2P08235 984 aa16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 MYOGP15173 224 aa16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 RABGGTBP53611 331 aa16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 GPNMBQ14956 572 aa16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 FAM47CQ5HY64 1035 aa16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 NFRKBQ6P4R8 1299 aa16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 HOMER1Q86YM7 354 aa16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 MCF2L2Q86YR7 1114 aa16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 IGDCC4Q8TDY8 1250 aa16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 DHX38Q92620 1227 aaKnown RBP16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 IWS1Q96ST2 819 aa16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 PDCD2LQ9BRP1 358 aa16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 MAF1Q9H063 256 aa16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 PCDHA1Q9Y5I3 950 aa16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 RBM8AQ9Y5S9 174 aaKnown RBP16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 U3KPZ7 1027 aaPredicted RBP16.11■□□□□ 0.17
GTF3C1-211ENST00000569653 ADGRE1Q14246 886 aa16.1■□□□□ 0.17
GTF3C1-211ENST00000569653 STXBP2Q15833 593 aa16.1■□□□□ 0.17
GTF3C1-211ENST00000569653 ARHGEF16Q5VV41 709 aa16.1■□□□□ 0.17
GTF3C1-211ENST00000569653 RUFY2Q8WXA3 655 aa16.1■□□□□ 0.17
GTF3C1-211ENST00000569653 MPHOSPH6Q99547 160 aaKnown RBP16.1■□□□□ 0.17
GTF3C1-211ENST00000569653 MYL10Q9BUA6 226 aa16.1■□□□□ 0.17
GTF3C1-211ENST00000569653 LSG1Q9H089 658 aaKnown RBP16.1■□□□□ 0.17
GTF3C1-211ENST00000569653 NKX2-4Q9H2Z4 354 aa16.1■□□□□ 0.17
GTF3C1-211ENST00000569653 BCAS3Q9H6U6 928 aa16.1■□□□□ 0.17
GTF3C1-211ENST00000569653 SORBS3O60504 671 aa16.09■□□□□ 0.17
GTF3C1-211ENST00000569653 EIF3JO75822 258 aaKnown RBP16.09■□□□□ 0.17
GTF3C1-211ENST00000569653 GH1P01241 217 aa16.09■□□□□ 0.17
GTF3C1-211ENST00000569653 SP2Q02086 613 aa16.09■□□□□ 0.17
GTF3C1-211ENST00000569653 HIC1Q14526 733 aa16.09■□□□□ 0.17
GTF3C1-211ENST00000569653 WTAPQ15007 396 aa16.09■□□□□ 0.17
GTF3C1-211ENST00000569653 GDF6Q6KF10 455 aaPredicted RBP16.09■□□□□ 0.17
GTF3C1-211ENST00000569653 DEFB128Q7Z7B8 93 aa16.09■□□□□ 0.17
GTF3C1-211ENST00000569653 WNT8BQ93098 351 aa16.09■□□□□ 0.17
GTF3C1-211ENST00000569653 PRDM12Q9H4Q4 367 aa16.09■□□□□ 0.17
GTF3C1-211ENST00000569653 LY9Q9HBG7 655 aa16.09■□□□□ 0.17
GTF3C1-211ENST00000569653 PRDM6Q9NQX0 595 aa16.09■□□□□ 0.17
GTF3C1-211ENST00000569653 KPNA6O60684 536 aa16.08■□□□□ 0.16
GTF3C1-211ENST00000569653 ARHGEF15O94989 841 aa16.08■□□□□ 0.16
GTF3C1-211ENST00000569653 ZNF286BP0CG31 522 aa16.08■□□□□ 0.16
GTF3C1-211ENST00000569653 CHMP4BP1P59074 171 aa16.08■□□□□ 0.16
GTF3C1-211ENST00000569653 TRDNQ13061 729 aa16.08■□□□□ 0.16
GTF3C1-211ENST00000569653 PGM5Q15124 567 aa16.08■□□□□ 0.16
GTF3C1-211ENST00000569653 TCTN1Q2MV58 587 aa16.08■□□□□ 0.16
GTF3C1-211ENST00000569653 TMEM67Q5HYA8 995 aa16.08■□□□□ 0.16
GTF3C1-211ENST00000569653 NCOA7Q8NI08 942 aa16.08■□□□□ 0.16
GTF3C1-211ENST00000569653 PIBF1Q8WXW3 757 aa16.08■□□□□ 0.16
GTF3C1-211ENST00000569653 EMID1Q96A84 441 aaPredicted RBP16.08■□□□□ 0.16
GTF3C1-211ENST00000569653 TELO2Q9Y4R8 837 aa16.08■□□□□ 0.16
GTF3C1-211ENST00000569653 MUC3AQ02505 3323 aa16.07■□□□□ 0.16
GTF3C1-211ENST00000569653 B4DLN1 442 aa16.07■□□□□ 0.16
GTF3C1-211ENST00000569653 HAS3O00219 553 aa16.07■□□□□ 0.16
GTF3C1-211ENST00000569653 IQCF3P0C7M6 154 aa16.07■□□□□ 0.16
GTF3C1-211ENST00000569653 SUPT20HL2P0C7V6 817 aa16.07■□□□□ 0.16
GTF3C1-211ENST00000569653 MYCLP12524 364 aaPredicted RBP16.07■□□□□ 0.16
GTF3C1-211ENST00000569653 HOXD8P13378 290 aaPredicted RBP16.07■□□□□ 0.16
GTF3C1-211ENST00000569653 MRPL12P52815 198 aaKnown RBP16.07■□□□□ 0.16
GTF3C1-211ENST00000569653 PTPN11Q06124 597 aaPredicted RBP16.07■□□□□ 0.16
GTF3C1-211ENST00000569653 BRDTQ58F21 947 aaPredicted RBP16.07■□□□□ 0.16
GTF3C1-211ENST00000569653 RALYLQ86SE5 291 aaKnown RBP16.07■□□□□ 0.16
GTF3C1-211ENST00000569653 VSIG10LQ86VR7 867 aa16.07■□□□□ 0.16
GTF3C1-211ENST00000569653 SESTD1Q86VW0 696 aa16.07■□□□□ 0.16
GTF3C1-211ENST00000569653 MRVI1Q9Y6F6 885 aa16.07■□□□□ 0.16
GTF3C1-211ENST00000569653 FRMPD4Q14CM0 1322 aa16.07■□□□□ 0.16
GTF3C1-211ENST00000569653 PRRC2BQ5JSZ5 2229 aaKnown RBP16.06■□□□□ 0.16
GTF3C1-211ENST00000569653 PITPNM1O00562 1244 aa16.06■□□□□ 0.16
GTF3C1-211ENST00000569653 F2P00734 622 aa16.06■□□□□ 0.16
GTF3C1-211ENST00000569653 UBA1P22314 1058 aaKnown RBP16.06■□□□□ 0.16
GTF3C1-211ENST00000569653 MRPS9P82933 396 aaKnown RBP16.06■□□□□ 0.16
GTF3C1-211ENST00000569653 SEMA3FQ13275 785 aa16.06■□□□□ 0.16
GTF3C1-211ENST00000569653 PTGISQ16647 500 aa16.06■□□□□ 0.16
GTF3C1-211ENST00000569653 HSDL1Q3SXM5 330 aa16.06■□□□□ 0.16
GTF3C1-211ENST00000569653 MYSM1Q5VVJ2 828 aa16.06■□□□□ 0.16
GTF3C1-211ENST00000569653 TRAF7Q6Q0C0 670 aa16.06■□□□□ 0.16
GTF3C1-211ENST00000569653 FCHSD1Q86WN1 690 aa16.06■□□□□ 0.16
GTF3C1-211ENST00000569653 ZNF654Q8IZM8 581 aa16.06■□□□□ 0.16
GTF3C1-211ENST00000569653 ESYT1Q9BSJ8 1104 aa16.06■□□□□ 0.16
GTF3C1-211ENST00000569653 HDAC6Q9UBN7 1215 aa16.06■□□□□ 0.16
GTF3C1-211ENST00000569653 SLC4A7Q9Y6M7 1214 aa16.06■□□□□ 0.16
GTF3C1-211ENST00000569653 XIRP2A4UGR9 3374 aa16.05■□□□□ 0.16
GTF3C1-211ENST00000569653 PNMA6FA0A0J9YX94 578 aa16.05■□□□□ 0.16
GTF3C1-211ENST00000569653 SH2B2O14492 632 aaPredicted RBP16.05■□□□□ 0.16
GTF3C1-211ENST00000569653 SLC27A2O14975 620 aa16.05■□□□□ 0.16
GTF3C1-211ENST00000569653 PLEKHA8P1O95397 391 aa16.05■□□□□ 0.16
GTF3C1-211ENST00000569653 PSEN2P49810 448 aa16.05■□□□□ 0.16
GTF3C1-211ENST00000569653 ZNF200P98182 395 aaPredicted RBP16.05■□□□□ 0.16
GTF3C1-211ENST00000569653 RAB30Q15771 203 aa16.05■□□□□ 0.16
GTF3C1-211ENST00000569653 TRIM71Q2Q1W2 868 aaKnown RBP16.05■□□□□ 0.16
GTF3C1-211ENST00000569653 SPRED2Q7Z698 418 aa16.05■□□□□ 0.16
GTF3C1-211ENST00000569653 RAB11FIP4Q86YS3 637 aa16.05■□□□□ 0.16
GTF3C1-211ENST00000569653 RPUSD2Q8IZ73 545 aaKnown RBP16.05■□□□□ 0.16
GTF3C1-211ENST00000569653 PPTC7Q8NI37 304 aa16.05■□□□□ 0.16
GTF3C1-211ENST00000569653 GTF2IRD1Q9UHL9 959 aa16.05■□□□□ 0.16
GTF3C1-211ENST00000569653 COL4A4P53420 1690 aaPredicted RBP16.05■□□□□ 0.16
GTF3C1-211ENST00000569653 ZBBXA8MT70 800 aa16.04■□□□□ 0.16
GTF3C1-211ENST00000569653 GCOM1H8Y6P7 765 aaPredicted RBP16.04■□□□□ 0.16
GTF3C1-211ENST00000569653 PRC1O43663 620 aa16.04■□□□□ 0.16
GTF3C1-211ENST00000569653 GGPS1O95749 300 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms