RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	B4GALT3	O60512	393 aa		5.85	□□□□□ -1.47
UBR1-209	ENST00000569243	RECK	O95980	971 aa		5.85	□□□□□ -1.47
UBR1-209	ENST00000569243	CD3E	P07766	207 aa		5.85	□□□□□ -1.47
UBR1-209	ENST00000569243	GLI4	P10075	376 aa		5.85	□□□□□ -1.47
UBR1-209	ENST00000569243	IFNGR1	P15260	489 aa		5.85	□□□□□ -1.47
UBR1-209	ENST00000569243	THBS2	P35442	1172 aa		5.85	□□□□□ -1.47
UBR1-209	ENST00000569243	SLC9A5	Q14940	896 aa		5.85	□□□□□ -1.47
UBR1-209	ENST00000569243	IGFL4	Q6B9Z1	124 aa		5.85	□□□□□ -1.47
UBR1-209	ENST00000569243	CABP7	Q86V35	215 aa		5.85	□□□□□ -1.47
UBR1-209	ENST00000569243	DNAJC10	Q8IXB1	793 aa		5.85	□□□□□ -1.47
UBR1-209	ENST00000569243	SEC16B	Q96JE7	1060 aa		5.85	□□□□□ -1.47
UBR1-209	ENST00000569243	SYT3	Q9BQG1	590 aa		5.85	□□□□□ -1.47
UBR1-209	ENST00000569243	GORASP1	Q9BQQ3	440 aa		5.85	□□□□□ -1.47
UBR1-209	ENST00000569243	EFR3B	Q9Y2G0	817 aa		5.85	□□□□□ -1.47
UBR1-209	ENST00000569243	ZBTB7A	O95365	584 aa		5.84	□□□□□ -1.47
UBR1-209	ENST00000569243	ATXN1	P54253	815 aa	Known RBP	5.84	□□□□□ -1.47
UBR1-209	ENST00000569243	NETO2	Q8NC67	525 aa		5.84	□□□□□ -1.47
UBR1-209	ENST00000569243	LCOR	Q96JN0	433 aa	Predicted RBP	5.84	□□□□□ -1.47
UBR1-209	ENST00000569243	ZDHHC15	Q96MV8	337 aa		5.84	□□□□□ -1.47
UBR1-209	ENST00000569243	CYP2C8	P10632	490 aa		5.83	□□□□□ -1.48
UBR1-209	ENST00000569243	SEPHS1	P49903	392 aa		5.83	□□□□□ -1.48
UBR1-209	ENST00000569243	ZNF143	P52747	638 aa	Predicted RBP	5.83	□□□□□ -1.48
UBR1-209	ENST00000569243	ABHD18	Q0P651	414 aa		5.83	□□□□□ -1.48
UBR1-209	ENST00000569243	PEX11G	Q96HA9	241 aa		5.83	□□□□□ -1.48
UBR1-209	ENST00000569243	C11orf84	Q9BUA3	381 aa	Predicted RBP	5.83	□□□□□ -1.48
UBR1-209	ENST00000569243	NUDT5	Q9UKK9	219 aa		5.83	□□□□□ -1.48
UBR1-209	ENST00000569243	STRIP2	Q9ULQ0	834 aa		5.83	□□□□□ -1.48
UBR1-209	ENST00000569243	TESMIN	Q9Y4I5	508 aa		5.83	□□□□□ -1.48
UBR1-209	ENST00000569243	BACE2	Q9Y5Z0	518 aa		5.83	□□□□□ -1.48
UBR1-209	ENST00000569243	C2orf71	A6NGG8	1288 aa		5.82	□□□□□ -1.48
UBR1-209	ENST00000569243	DDX3X	O00571	662 aa	Known RBP eCLIP	5.82	□□□□□ -1.48
UBR1-209	ENST00000569243	PPFIA2	O75334	1257 aa		5.82	□□□□□ -1.48
UBR1-209	ENST00000569243	EPHX1	P07099	455 aa		5.82	□□□□□ -1.48
UBR1-209	ENST00000569243	AMPD2	Q01433	879 aa		5.82	□□□□□ -1.48
UBR1-209	ENST00000569243	FOXE3	Q13461	319 aa		5.82	□□□□□ -1.48
UBR1-209	ENST00000569243	PPP2R5D	Q14738	602 aa		5.82	□□□□□ -1.48
UBR1-209	ENST00000569243	CCDC81	Q6ZN84	652 aa		5.82	□□□□□ -1.48
UBR1-209	ENST00000569243	ADAT2	Q7Z6V5	191 aa	Known RBP	5.82	□□□□□ -1.48
UBR1-209	ENST00000569243	PLEKHH3	Q7Z736	793 aa		5.82	□□□□□ -1.48
UBR1-209	ENST00000569243	LZTR1	Q8N653	840 aa		5.82	□□□□□ -1.48
UBR1-209	ENST00000569243	SHD	Q96IW2	340 aa		5.82	□□□□□ -1.48
UBR1-209	ENST00000569243	SEMA4A	Q9H3S1	761 aa		5.82	□□□□□ -1.48
UBR1-209	ENST00000569243	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	5.82	□□□□□ -1.48
UBR1-209	ENST00000569243	CGGBP1	Q9UFW8	167 aa	Predicted RBP	5.82	□□□□□ -1.48
UBR1-209	ENST00000569243	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	5.82	□□□□□ -1.48
UBR1-209	ENST00000569243	ANKRD34B	A5PLL1	514 aa		5.81	□□□□□ -1.48
UBR1-209	ENST00000569243	C8B	P07358	591 aa		5.81	□□□□□ -1.48
UBR1-209	ENST00000569243	NAT2	P11245	290 aa		5.81	□□□□□ -1.48
UBR1-209	ENST00000569243	PAM	P19021	973 aa		5.81	□□□□□ -1.48
UBR1-209	ENST00000569243	DPT	Q07507	201 aa		5.81	□□□□□ -1.48
UBR1-209	ENST00000569243	POMZP3	Q6PJE2	187 aa		5.81	□□□□□ -1.48
UBR1-209	ENST00000569243	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	5.81	□□□□□ -1.48
UBR1-209	ENST00000569243	KLHL6	Q8WZ60	621 aa		5.81	□□□□□ -1.48
UBR1-209	ENST00000569243	MTA3	Q9BTC8	594 aa		5.81	□□□□□ -1.48
UBR1-209	ENST00000569243	MCMBP	Q9BTE3	642 aa		5.81	□□□□□ -1.48
UBR1-209	ENST00000569243	PCDH18	Q9HCL0	1135 aa		5.81	□□□□□ -1.48
UBR1-209	ENST00000569243	JADE2	Q9NQC1	790 aa		5.81	□□□□□ -1.48
UBR1-209	ENST00000569243	DLL4	Q9NR61	685 aa		5.81	□□□□□ -1.48
UBR1-209	ENST00000569243	FAM86C1	Q9NVL1	165 aa		5.81	□□□□□ -1.48
UBR1-209	ENST00000569243	NPHP3-ACAD11	A0A0J9YXS1	232 aa		5.8	□□□□□ -1.48
UBR1-209	ENST00000569243	ZNF623	O75123	536 aa		5.8	□□□□□ -1.48
UBR1-209	ENST00000569243	ZNF202	O95125	648 aa		5.8	□□□□□ -1.48
UBR1-209	ENST00000569243	STK32C	Q86UX6	486 aa		5.8	□□□□□ -1.48
UBR1-209	ENST00000569243	NT5DC4	Q86YG4	428 aa		5.8	□□□□□ -1.48
UBR1-209	ENST00000569243	ZNF513	Q8N8E2	541 aa	Predicted RBP	5.8	□□□□□ -1.48
UBR1-209	ENST00000569243	KY	Q8NBH2	561 aa		5.8	□□□□□ -1.48
UBR1-209	ENST00000569243	MMP19	Q99542	508 aa		5.8	□□□□□ -1.48
UBR1-209	ENST00000569243	TRIM8	Q9BZR9	551 aa		5.8	□□□□□ -1.48
UBR1-209	ENST00000569243	PATE3	B3GLJ2	98 aa		5.79	□□□□□ -1.48
UBR1-209	ENST00000569243	STXBP3	O00186	592 aa		5.79	□□□□□ -1.48
UBR1-209	ENST00000569243	HDLBP	Q00341	1268 aa	Known RBP	5.79	□□□□□ -1.48
UBR1-209	ENST00000569243	NCAPH	Q15003	741 aa		5.79	□□□□□ -1.48
UBR1-209	ENST00000569243	ADCY4	Q8NFM4	1077 aa		5.79	□□□□□ -1.48
UBR1-209	ENST00000569243	COPS5	Q92905	334 aa		5.79	□□□□□ -1.48
UBR1-209	ENST00000569243	CRAMP1	Q96RY5	1269 aa		5.79	□□□□□ -1.48
UBR1-209	ENST00000569243	PTPN18	Q99952	460 aa		5.79	□□□□□ -1.48
UBR1-209	ENST00000569243	TGIF2	Q9GZN2	237 aa		5.79	□□□□□ -1.48
UBR1-209	ENST00000569243	PCDHB10	Q9UN67	800 aa		5.79	□□□□□ -1.48
UBR1-209	ENST00000569243		A0A087X1B8	175 aa		5.78	□□□□□ -1.48
UBR1-209	ENST00000569243	NPHS1	O60500	1241 aa		5.78	□□□□□ -1.48
UBR1-209	ENST00000569243	PPP1R11	O60927	126 aa	Predicted RBP	5.78	□□□□□ -1.48
UBR1-209	ENST00000569243	VAMP4	O75379	141 aa		5.78	□□□□□ -1.48
UBR1-209	ENST00000569243	KRTAP15-1	Q3LI76	137 aa		5.78	□□□□□ -1.48
UBR1-209	ENST00000569243	MIIP	Q5JXC2	388 aa		5.78	□□□□□ -1.48
UBR1-209	ENST00000569243	USP33	Q8TEY7	942 aa		5.78	□□□□□ -1.48
UBR1-209	ENST00000569243	CPLX3	Q8WVH0	158 aa		5.78	□□□□□ -1.48
UBR1-209	ENST00000569243	ZG16B	Q96DA0	208 aa		5.78	□□□□□ -1.48
UBR1-209	ENST00000569243	FGD4	Q96M96	766 aa		5.78	□□□□□ -1.48
UBR1-209	ENST00000569243	APBA2	Q99767	749 aa		5.78	□□□□□ -1.48
UBR1-209	ENST00000569243	ZFR2	Q9UPR6	939 aa	Known RBP	5.78	□□□□□ -1.48
UBR1-209	ENST00000569243	SUGT1	Q9Y2Z0	365 aa		5.78	□□□□□ -1.48
UBR1-209	ENST00000569243	EMC9	Q9Y3B6	208 aa		5.78	□□□□□ -1.48
UBR1-209	ENST00000569243	NASP	P49321	788 aa	Predicted RBP	5.77	□□□□□ -1.49
UBR1-209	ENST00000569243	PPP2CB	P62714	309 aa		5.77	□□□□□ -1.49
UBR1-209	ENST00000569243	PPP2CA	P67775	309 aa		5.77	□□□□□ -1.49
UBR1-209	ENST00000569243	CSRP2	Q16527	193 aa		5.77	□□□□□ -1.49
UBR1-209	ENST00000569243	PPP2R5E	Q16537	467 aa		5.77	□□□□□ -1.49
UBR1-209	ENST00000569243	DPY19L1	Q2PZI1	675 aa		5.77	□□□□□ -1.49
UBR1-209	ENST00000569243	WWC2	Q6AWC2	1192 aa		5.77	□□□□□ -1.49
UBR1-209	ENST00000569243	IQCE	Q6IPM2	695 aa		5.77	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms