RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 NOL7Q9UMY1 257 aaKnown RBP16.97■□□□□ 0.31
KLHDC4-223ENST00000568499 ZNFX1Q9P2E3 1918 aaKnown RBP16.97■□□□□ 0.31
KLHDC4-223ENST00000568499 DOCK3Q8IZD9 2030 aa16.97■□□□□ 0.31
KLHDC4-223ENST00000568499 SNAI1O95863 264 aaPredicted RBP16.96■□□□□ 0.31
KLHDC4-223ENST00000568499 CYP3A4P08684 503 aa16.96■□□□□ 0.31
KLHDC4-223ENST00000568499 U2AF2P26368 475 aaKnown RBP eCLIP16.96■□□□□ 0.31
KLHDC4-223ENST00000568499 CACNB2Q08289 660 aaPredicted RBP16.96■□□□□ 0.31
KLHDC4-223ENST00000568499 IQSEC1Q6DN90 963 aa16.96■□□□□ 0.31
KLHDC4-223ENST00000568499 EEPD1Q7L9B9 569 aa16.96■□□□□ 0.31
KLHDC4-223ENST00000568499 NEK8Q86SG6 692 aa16.96■□□□□ 0.31
KLHDC4-223ENST00000568499 NOSTRINQ8IVI9 506 aa16.96■□□□□ 0.31
KLHDC4-223ENST00000568499 SCFD2Q8WU76 684 aa16.96■□□□□ 0.31
KLHDC4-223ENST00000568499 FAM184BQ9ULE4 1060 aa16.96■□□□□ 0.31
KLHDC4-223ENST00000568499 MAFGO15525 162 aa16.95■□□□□ 0.3
KLHDC4-223ENST00000568499 MSCO60682 206 aa16.95■□□□□ 0.3
KLHDC4-223ENST00000568499 IGHA2P01877 340 aa16.95■□□□□ 0.3
KLHDC4-223ENST00000568499 AKR1A1P14550 325 aa16.95■□□□□ 0.3
KLHDC4-223ENST00000568499 TTLL4Q14679 1199 aa16.95■□□□□ 0.3
KLHDC4-223ENST00000568499 INF2Q27J81 1249 aa16.95■□□□□ 0.3
KLHDC4-223ENST00000568499 SEPT14Q6ZU15 432 aa16.95■□□□□ 0.3
KLHDC4-223ENST00000568499 BRAPQ7Z569 592 aa16.95■□□□□ 0.3
KLHDC4-223ENST00000568499 FBXO16Q8IX29 292 aaPredicted RBP16.95■□□□□ 0.3
KLHDC4-223ENST00000568499 IL31RAQ8NI17 732 aa16.95■□□□□ 0.3
KLHDC4-223ENST00000568499 RTEL1Q9NZ71 1219 aa16.95■□□□□ 0.3
KLHDC4-223ENST00000568499 ADAMTS3O15072 1205 aa16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 FIBPO43427 364 aa16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 TGFB3P10600 412 aa16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 CYBAP13498 195 aa16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 GCFC2P16383 781 aaKnown RBP16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 TRAPPC10P48553 1259 aa16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 MRPS9P82933 396 aaKnown RBP16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 SETQ01105 290 aaPredicted RBP16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 LETM2Q2VYF4 491 aa16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 CEP55Q53EZ4 464 aa16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 PRAMEF19Q5SWL8 479 aa16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 MAP3K21Q5TCX8 1036 aa16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 MOXD1Q6UVY6 613 aa16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 NIPA1Q7RTP0 329 aa16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 TNFRSF25Q93038 417 aa16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 ARMC5Q96C12 935 aa16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 GPRASP2Q96D09 838 aa16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 MXRA8Q9BRK3 442 aa16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 ZSCAN16Q9H4T2 348 aaPredicted RBP16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 MRVI1Q9Y6F6 885 aa16.94■□□□□ 0.3
KLHDC4-223ENST00000568499 PLXNA1Q9UIW2 1896 aa16.93■□□□□ 0.3
KLHDC4-223ENST00000568499 NKRFO15226 690 aaKnown RBP eCLIP16.93■□□□□ 0.3
KLHDC4-223ENST00000568499 SEPT4O43236 478 aa16.93■□□□□ 0.3
KLHDC4-223ENST00000568499 ZNF865P0CJ78 1059 aaPredicted RBP16.93■□□□□ 0.3
KLHDC4-223ENST00000568499 CIITAP33076 1130 aa16.93■□□□□ 0.3
KLHDC4-223ENST00000568499 TNFAIP2Q03169 654 aa16.93■□□□□ 0.3
KLHDC4-223ENST00000568499 TRIM32Q13049 653 aa16.93■□□□□ 0.3
KLHDC4-223ENST00000568499 MTMR1Q13613 665 aa16.93■□□□□ 0.3
KLHDC4-223ENST00000568499 CCDC144BQ3MJ40 725 aa16.93■□□□□ 0.3
KLHDC4-223ENST00000568499 GIMAP8Q8ND71 665 aaPredicted RBP16.93■□□□□ 0.3
KLHDC4-223ENST00000568499 INPP4AQ96PE3 977 aaPredicted RBP16.93■□□□□ 0.3
KLHDC4-223ENST00000568499 WDR11Q9BZH6 1224 aa16.93■□□□□ 0.3
KLHDC4-223ENST00000568499 JADE2Q9NQC1 790 aa16.93■□□□□ 0.3
KLHDC4-223ENST00000568499 UBIAD1Q9Y5Z9 338 aa16.93■□□□□ 0.3
KLHDC4-223ENST00000568499 RBM47A0AV96 593 aaKnown RBP16.92■□□□□ 0.3
KLHDC4-223ENST00000568499 MARCH6O60337 910 aa16.92■□□□□ 0.3
KLHDC4-223ENST00000568499 CCNT1O60563 726 aaKnown RBP16.92■□□□□ 0.3
KLHDC4-223ENST00000568499 RARBP10826 455 aa16.92■□□□□ 0.3
KLHDC4-223ENST00000568499 ICAM3P32942 547 aa16.92■□□□□ 0.3
KLHDC4-223ENST00000568499 RILPL1Q5EBL4 403 aa16.92■□□□□ 0.3
KLHDC4-223ENST00000568499 TAPT1Q6NXT6 567 aa16.92■□□□□ 0.3
KLHDC4-223ENST00000568499 PLA2G4DQ86XP0 818 aa16.92■□□□□ 0.3
KLHDC4-223ENST00000568499 CRYGNQ8WXF5 182 aa16.92■□□□□ 0.3
KLHDC4-223ENST00000568499 ZNF333Q96JL9 665 aa16.92■□□□□ 0.3
KLHDC4-223ENST00000568499 TMEM106CQ9BVX2 250 aa16.92■□□□□ 0.3
KLHDC4-223ENST00000568499 KATNBL1Q9H079 304 aa16.92■□□□□ 0.3
KLHDC4-223ENST00000568499 RNF208Q9H0X6 261 aa16.92■□□□□ 0.3
KLHDC4-223ENST00000568499 SPC25Q9HBM1 224 aa16.92■□□□□ 0.3
KLHDC4-223ENST00000568499 MTMR6Q9Y217 621 aa16.92■□□□□ 0.3
KLHDC4-223ENST00000568499 DDX49Q9Y6V7 483 aaKnown RBP16.92■□□□□ 0.3
KLHDC4-223ENST00000568499 CYP3A7-CYP3A51PA0A087WV96 503 aa16.91■□□□□ 0.3
KLHDC4-223ENST00000568499 MEIS1O00470 390 aa16.91■□□□□ 0.3
KLHDC4-223ENST00000568499 TXNP10599 105 aaKnown RBP16.91■□□□□ 0.3
KLHDC4-223ENST00000568499 CCL5P13501 91 aa16.91■□□□□ 0.3
KLHDC4-223ENST00000568499 CAPN2P17655 700 aa16.91■□□□□ 0.3
KLHDC4-223ENST00000568499 ITGB5P18084 799 aa16.91■□□□□ 0.3
KLHDC4-223ENST00000568499 CYP3A7P24462 503 aa16.91■□□□□ 0.3
KLHDC4-223ENST00000568499 CCND3P30281 292 aaPredicted RBP16.91■□□□□ 0.3
KLHDC4-223ENST00000568499 ORC2Q13416 577 aaPredicted RBP16.91■□□□□ 0.3
KLHDC4-223ENST00000568499 NEDD9Q14511 834 aa16.91■□□□□ 0.3
KLHDC4-223ENST00000568499 PRR16Q569H4 304 aa16.91■□□□□ 0.3
KLHDC4-223ENST00000568499 PPP4R3AQ6IN85 833 aa16.91■□□□□ 0.3
KLHDC4-223ENST00000568499 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.91■□□□□ 0.35e-7■■■□□ 17.7
KLHDC4-223ENST00000568499 AP5M1Q9H0R1 490 aa16.91■□□□□ 0.3
KLHDC4-223ENST00000568499 DDX20Q9UHI6 824 aaKnown RBP16.91■□□□□ 0.3
KLHDC4-223ENST00000568499 DDX25Q9UHL0 483 aaKnown RBP16.91■□□□□ 0.3
KLHDC4-223ENST00000568499 TCEAL9Q9UHQ7 104 aa16.91■□□□□ 0.3
KLHDC4-223ENST00000568499 SPATA31C2B4DYI2 1134 aa16.9■□□□□ 0.3
KLHDC4-223ENST00000568499 KIF28PB7ZC32 967 aa16.9■□□□□ 0.3
KLHDC4-223ENST00000568499 BAG4O95429 457 aaKnown RBP16.9■□□□□ 0.3
KLHDC4-223ENST00000568499 MYCP01106 439 aaPredicted RBP16.9■□□□□ 0.3
KLHDC4-223ENST00000568499 ZSCAN22P10073 491 aaPredicted RBP16.9■□□□□ 0.3
KLHDC4-223ENST00000568499 ATP2B1P20020 1258 aa16.9■□□□□ 0.3
KLHDC4-223ENST00000568499 ADCYAP1R1P41586 468 aa16.9■□□□□ 0.3
KLHDC4-223ENST00000568499 NUCB2P80303 420 aa16.9■□□□□ 0.3
KLHDC4-223ENST00000568499 Q4G0T1 1027 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms