RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 YME1L1Q96TA2 773 aa16.4■□□□□ 0.22
SMG1-213ENST00000567737 C1orf115Q9H7X2 142 aa16.4■□□□□ 0.22
SMG1-213ENST00000567737 ALG13Q9NP73 1137 aaKnown RBP16.4■□□□□ 0.22
SMG1-213ENST00000567737 TNNQ9UQP3 1299 aa16.4■□□□□ 0.22
SMG1-213ENST00000567737 ZFHX2Q9C0A1 2572 aaPredicted RBP16.4■□□□□ 0.22
SMG1-213ENST00000567737 TRIP12Q14669 1992 aaPredicted RBP16.39■□□□□ 0.21
SMG1-213ENST00000567737 IGKV6D-41A0A0C4DH26 115 aa16.39■□□□□ 0.21
SMG1-213ENST00000567737 H0Y858 1186 aa16.39■□□□□ 0.21
SMG1-213ENST00000567737 VCPP55072 806 aaKnown RBP16.39■□□□□ 0.21
SMG1-213ENST00000567737 DLX2Q07687 328 aaPredicted RBP16.39■□□□□ 0.21
SMG1-213ENST00000567737 ASCL5Q7RTU5 278 aa16.39■□□□□ 0.21
SMG1-213ENST00000567737 ZNF444Q8N0Y2 327 aaPredicted RBP16.39■□□□□ 0.21
SMG1-213ENST00000567737 SCFD2Q8WU76 684 aa16.39■□□□□ 0.21
SMG1-213ENST00000567737 STAG1Q8WVM7 1258 aa16.39■□□□□ 0.21
SMG1-213ENST00000567737 CEP95Q96GE4 821 aa16.39■□□□□ 0.21
SMG1-213ENST00000567737 CTAGE1Q96RT6 745 aa16.39■□□□□ 0.21
SMG1-213ENST00000567737 TLR9Q9NR96 1032 aa16.39■□□□□ 0.21
SMG1-213ENST00000567737 MTMR4Q9NYA4 1195 aa16.39■□□□□ 0.21
SMG1-213ENST00000567737 CD207Q9UJ71 328 aa16.39■□□□□ 0.21
SMG1-213ENST00000567737 KMT2EQ8IZD2 1858 aa16.39■□□□□ 0.21
SMG1-213ENST00000567737 GALR2O43603 387 aaPredicted RBP16.38■□□□□ 0.21
SMG1-213ENST00000567737 LGR5O75473 907 aa16.38■□□□□ 0.21
SMG1-213ENST00000567737 AVPR2P30518 371 aa16.38■□□□□ 0.21
SMG1-213ENST00000567737 SIGLEC14Q08ET2 396 aa16.38■□□□□ 0.21
SMG1-213ENST00000567737 BAATQ14032 418 aaPredicted RBP16.38■□□□□ 0.21
SMG1-213ENST00000567737 FRAT1Q92837 279 aaPredicted RBP16.38■□□□□ 0.21
SMG1-213ENST00000567737 COPS5Q92905 334 aa16.38■□□□□ 0.21
SMG1-213ENST00000567737 MPHOSPH6Q99547 160 aaKnown RBP16.38■□□□□ 0.21
SMG1-213ENST00000567737 FSD1Q9BTV5 496 aa16.38■□□□□ 0.21
SMG1-213ENST00000567737 CCPG1Q9ULG6 757 aa16.38■□□□□ 0.21
SMG1-213ENST00000567737 TXNP10599 105 aaKnown RBP16.37■□□□□ 0.21
SMG1-213ENST00000567737 SLC1A4P43007 532 aa16.37■□□□□ 0.21
SMG1-213ENST00000567737 SNAP25P60880 206 aa16.37■□□□□ 0.21
SMG1-213ENST00000567737 PDE4BQ07343 736 aa16.37■□□□□ 0.21
SMG1-213ENST00000567737 PDE4DQ08499 809 aa16.37■□□□□ 0.21
SMG1-213ENST00000567737 HYAL1Q12794 435 aa16.37■□□□□ 0.21
SMG1-213ENST00000567737 SBK1Q52WX2 424 aa16.37■□□□□ 0.21
SMG1-213ENST00000567737 ZNF287Q9HBT7 754 aa16.37■□□□□ 0.21
SMG1-213ENST00000567737 IL1RAPL2Q9NP60 686 aa16.37■□□□□ 0.21
SMG1-213ENST00000567737 PAG1Q9NWQ8 432 aa16.37■□□□□ 0.21
SMG1-213ENST00000567737 TRPC6Q9Y210 931 aa16.37■□□□□ 0.21
SMG1-213ENST00000567737 EXOC6BQ9Y2D4 811 aa16.37■□□□□ 0.21
SMG1-213ENST00000567737 STK24Q9Y6E0 443 aa16.37■□□□□ 0.21
SMG1-213ENST00000567737 MYH4Q9Y623 1939 aa16.37■□□□□ 0.21
SMG1-213ENST00000567737 PTPDC1A2A3K4 754 aa16.36■□□□□ 0.21
SMG1-213ENST00000567737 PRR23AA6NEV1 266 aa16.36■□□□□ 0.21
SMG1-213ENST00000567737 MINDY4BA8MYZ0 360 aa16.36■□□□□ 0.21
SMG1-213ENST00000567737 KDM4AO75164 1064 aa16.36■□□□□ 0.21
SMG1-213ENST00000567737 UBE3CQ15386 1083 aa16.36■□□□□ 0.21
SMG1-213ENST00000567737 TMEM57Q8N5G2 664 aa16.36■□□□□ 0.21
SMG1-213ENST00000567737 GMCL1Q96IK5 515 aa16.36■□□□□ 0.21
SMG1-213ENST00000567737 LMAN2LQ9H0V9 348 aa16.36■□□□□ 0.21
SMG1-213ENST00000567737 GTF2IRD1Q9UHL9 959 aa16.36■□□□□ 0.21
SMG1-213ENST00000567737 EMSYQ7Z589 1322 aa16.36■□□□□ 0.21
SMG1-213ENST00000567737 PLA2G6O60733 806 aa16.35■□□□□ 0.21
SMG1-213ENST00000567737 TBX10O75333 385 aa16.35■□□□□ 0.21
SMG1-213ENST00000567737 PTK7Q13308 1070 aa16.35■□□□□ 0.21
SMG1-213ENST00000567737 ZNF618Q5T7W0 954 aa16.35■□□□□ 0.21
SMG1-213ENST00000567737 C7orf31Q8N865 590 aa16.35■□□□□ 0.21
SMG1-213ENST00000567737 DBF4BQ8NFT6 615 aa16.35■□□□□ 0.21
SMG1-213ENST00000567737 CHMP4CQ96CF2 233 aa16.35■□□□□ 0.21
SMG1-213ENST00000567737 IGFLR1Q9H665 355 aa16.35■□□□□ 0.21
SMG1-213ENST00000567737 PRR12Q9ULL5 1215 aa16.35■□□□□ 0.21
SMG1-213ENST00000567737 SPTBN4Q9H254 2564 aa16.35■□□□□ 0.21
SMG1-213ENST00000567737 PTPRZ1P23471 2315 aaPredicted RBP16.34■□□□□ 0.21
SMG1-213ENST00000567737 PLXNA3P51805 1871 aa16.34■□□□□ 0.21
SMG1-213ENST00000567737 LOC730098B7Z3J9 87 aa16.34■□□□□ 0.21
SMG1-213ENST00000567737 UPP2O95045 317 aa16.34■□□□□ 0.21
SMG1-213ENST00000567737 ICAM1P05362 532 aa16.34■□□□□ 0.21
SMG1-213ENST00000567737 MMP3P08254 477 aa16.34■□□□□ 0.21
SMG1-213ENST00000567737 MCCP23508 829 aa16.34■□□□□ 0.21
SMG1-213ENST00000567737 CTNNB1P35222 781 aa16.34■□□□□ 0.21
SMG1-213ENST00000567737 MBTPS1Q14703 1052 aa16.34■□□□□ 0.21
SMG1-213ENST00000567737 TRAF7Q6Q0C0 670 aa16.34■□□□□ 0.21
SMG1-213ENST00000567737 CLASRPQ8N2M8 674 aaKnown RBP16.34■□□□□ 0.21
SMG1-213ENST00000567737 HDAC6Q9UBN7 1215 aa16.34■□□□□ 0.21
SMG1-213ENST00000567737 LCTP09848 1927 aa16.34■□□□□ 0.21
SMG1-213ENST00000567737 PRDM1O75626 825 aa16.33■□□□□ 0.2
SMG1-213ENST00000567737 GABBR2O75899 941 aa16.33■□□□□ 0.2
SMG1-213ENST00000567737 IFIT2P09913 472 aaKnown RBP16.33■□□□□ 0.2
SMG1-213ENST00000567737 TSPY3P0CV98 308 aa16.33■□□□□ 0.2
SMG1-213ENST00000567737 TSPY8P0CW00 308 aa16.33■□□□□ 0.2
SMG1-213ENST00000567737 CASTP20810 708 aaKnown RBP16.33■□□□□ 0.2
SMG1-213ENST00000567737 CALML3P27482 149 aa16.33■□□□□ 0.2
SMG1-213ENST00000567737 TIE1P35590 1138 aa16.33■□□□□ 0.2
SMG1-213ENST00000567737 NDUFV1P49821 464 aa16.33■□□□□ 0.2
SMG1-213ENST00000567737 KCTD1Q719H9 257 aa16.33■□□□□ 0.2
SMG1-213ENST00000567737 AFG1LQ8WV93 481 aa16.33■□□□□ 0.2
SMG1-213ENST00000567737 TOP1MTQ969P6 601 aa16.33■□□□□ 0.2
SMG1-213ENST00000567737 ASIC4Q96FT7 647 aa16.33■□□□□ 0.2
SMG1-213ENST00000567737 C11orf84Q9BUA3 381 aaPredicted RBP16.33■□□□□ 0.2
SMG1-213ENST00000567737 PUS7LQ9H0K6 701 aaKnown RBP16.33■□□□□ 0.2
SMG1-213ENST00000567737 COL4A6Q14031 1691 aa16.33■□□□□ 0.2
SMG1-213ENST00000567737 B4DLN1 442 aa16.32■□□□□ 0.2
SMG1-213ENST00000567737 C5orf67F2Z3F1 127 aa16.32■□□□□ 0.2
SMG1-213ENST00000567737 EYA4O95677 639 aa16.32■□□□□ 0.2
SMG1-213ENST00000567737 CHGBP05060 677 aa16.32■□□□□ 0.2
SMG1-213ENST00000567737 RB1P06400 928 aa16.32■□□□□ 0.2
SMG1-213ENST00000567737 NBL1P41271 181 aa16.32■□□□□ 0.2
SMG1-213ENST00000567737 MRPL12P52815 198 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms