RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 LRRC41Q15345 812 aa19.74■□□□□ 0.75
COMMD4-220ENST00000567720 TLK2Q86UE8 772 aa19.74■□□□□ 0.75
COMMD4-220ENST00000567720 VSIG10LQ86VR7 867 aa19.74■□□□□ 0.75
COMMD4-220ENST00000567720 TEX2Q8IWB9 1127 aa19.74■□□□□ 0.75
COMMD4-220ENST00000567720 ZFP91Q96JP5 570 aaPredicted RBP19.74■□□□□ 0.75
COMMD4-220ENST00000567720 ANO3Q9BYT9 981 aa19.74■□□□□ 0.75
COMMD4-220ENST00000567720 UPF3AQ9H1J1 476 aaKnown RBP19.74■□□□□ 0.75
COMMD4-220ENST00000567720 SH3GLB2Q9NR46 395 aa19.74■□□□□ 0.75
COMMD4-220ENST00000567720 SH2B1Q9NRF2 756 aaPredicted RBP19.74■□□□□ 0.75
COMMD4-220ENST00000567720 ORC3Q9UBD5 711 aaPredicted RBP19.74■□□□□ 0.75
COMMD4-220ENST00000567720 PCDHA6Q9UN73 950 aa19.74■□□□□ 0.75
COMMD4-220ENST00000567720 PCDHA8Q9Y5H6 950 aa19.74■□□□□ 0.75
COMMD4-220ENST00000567720 DNM1LO00429 736 aa19.73■□□□□ 0.75
COMMD4-220ENST00000567720 CAPN2P17655 700 aa19.73■□□□□ 0.75
COMMD4-220ENST00000567720 AP3B2Q13367 1082 aa19.73■□□□□ 0.75
COMMD4-220ENST00000567720 NPY5RQ15761 445 aa19.73■□□□□ 0.75
COMMD4-220ENST00000567720 DUSP28Q4G0W2 176 aa19.73■□□□□ 0.75
COMMD4-220ENST00000567720 PCNX4Q63HM2 1172 aa19.73■□□□□ 0.75
COMMD4-220ENST00000567720 SEPT14Q6ZU15 432 aa19.73■□□□□ 0.75
COMMD4-220ENST00000567720 REXO1Q8N1G1 1221 aaKnown RBP19.73■□□□□ 0.75
COMMD4-220ENST00000567720 RASGRP4Q8TDF6 673 aa19.73■□□□□ 0.75
COMMD4-220ENST00000567720 SCFD2Q8WU76 684 aa19.73■□□□□ 0.75
COMMD4-220ENST00000567720 PAWRQ96IZ0 340 aaKnown RBP19.73■□□□□ 0.75
COMMD4-220ENST00000567720 ZSCAN31Q96LW9 406 aaPredicted RBP19.73■□□□□ 0.75
COMMD4-220ENST00000567720 WDR11Q9BZH6 1224 aa19.73■□□□□ 0.75
COMMD4-220ENST00000567720 GLT8D2Q9H1C3 349 aa19.73■□□□□ 0.75
COMMD4-220ENST00000567720 C6orf50Q9HD87 102 aa19.73■□□□□ 0.75
COMMD4-220ENST00000567720 CTAGE5O15320 804 aa19.72■□□□□ 0.75
COMMD4-220ENST00000567720 EIF3JO75822 258 aaKnown RBP19.72■□□□□ 0.75
COMMD4-220ENST00000567720 COL6A1P12109 1028 aa19.72■□□□□ 0.75
COMMD4-220ENST00000567720 IQSEC1Q6DN90 963 aa19.72■□□□□ 0.75
COMMD4-220ENST00000567720 INPP4AQ96PE3 977 aaPredicted RBP19.72■□□□□ 0.75
COMMD4-220ENST00000567720 GJB4Q9NTQ9 266 aa19.72■□□□□ 0.75
COMMD4-220ENST00000567720 SCN10AQ9Y5Y9 1956 aa19.72■□□□□ 0.75
COMMD4-220ENST00000567720 MYCNP04198 464 aaPredicted RBP19.71■□□□□ 0.75
COMMD4-220ENST00000567720 CST5P28325 142 aaPredicted RBP19.71■□□□□ 0.75
COMMD4-220ENST00000567720 GNA11P29992 359 aa19.71■□□□□ 0.75
COMMD4-220ENST00000567720 GJA9P57773 515 aa19.71■□□□□ 0.75
COMMD4-220ENST00000567720 JAKMIP3Q5VZ66 844 aa19.71■□□□□ 0.75
COMMD4-220ENST00000567720 CCDC62Q6P9F0 684 aa19.71■□□□□ 0.75
COMMD4-220ENST00000567720 KLHDC9Q8NEP7 349 aa19.71■□□□□ 0.75
COMMD4-220ENST00000567720 IL27Q8NEV9 243 aa19.71■□□□□ 0.75
COMMD4-220ENST00000567720 COPS5Q92905 334 aa19.71■□□□□ 0.75
COMMD4-220ENST00000567720 KBTBD13C9JR72 458 aa19.7■□□□□ 0.74
COMMD4-220ENST00000567720 FOSP01100 380 aaPredicted RBP19.7■□□□□ 0.74
COMMD4-220ENST00000567720 C6orf222P0C671 652 aaPredicted RBP19.7■□□□□ 0.74
COMMD4-220ENST00000567720 SREBF1P36956 1147 aa19.7■□□□□ 0.74
COMMD4-220ENST00000567720 NLRP5P59047 1200 aa19.7■□□□□ 0.74
COMMD4-220ENST00000567720 NKX3-2P78367 333 aa19.7■□□□□ 0.74
COMMD4-220ENST00000567720 SEMA3FQ13275 785 aa19.7■□□□□ 0.74
COMMD4-220ENST00000567720 TTLL4Q14679 1199 aa19.7■□□□□ 0.74
COMMD4-220ENST00000567720 DAGLBQ8NCG7 672 aa19.7■□□□□ 0.74
COMMD4-220ENST00000567720 ARRDC4Q8NCT1 418 aa19.7■□□□□ 0.74
COMMD4-220ENST00000567720 TMX3Q96JJ7 454 aa19.7■□□□□ 0.74
COMMD4-220ENST00000567720 ALG1Q9BT22 464 aa19.7■□□□□ 0.74
COMMD4-220ENST00000567720 PHF20Q9BVI0 1012 aa19.7■□□□□ 0.74
COMMD4-220ENST00000567720 EHMT1Q9H9B1 1298 aa19.7■□□□□ 0.74
COMMD4-220ENST00000567720 KCNJ14Q9UNX9 436 aa19.7■□□□□ 0.74
COMMD4-220ENST00000567720 MRVI1Q9Y6F6 885 aa19.7■□□□□ 0.74
COMMD4-220ENST00000567720 WDR81Q562E7 1941 aa19.7■□□□□ 0.74
COMMD4-220ENST00000567720 M0R2N6 131 aa19.69■□□□□ 0.74
COMMD4-220ENST00000567720 STAM2O75886 525 aa19.69■□□□□ 0.74
COMMD4-220ENST00000567720 TXNP10599 105 aaKnown RBP19.69■□□□□ 0.74
COMMD4-220ENST00000567720 LY6KQ17RY6 165 aa19.69■□□□□ 0.74
COMMD4-220ENST00000567720 CCSAPQ6IQ19 270 aaPredicted RBP19.69■□□□□ 0.74
COMMD4-220ENST00000567720 XRRA1Q6P2D8 792 aa19.69■□□□□ 0.74
COMMD4-220ENST00000567720 NECAB2Q7Z6G3 386 aa19.69■□□□□ 0.74
COMMD4-220ENST00000567720 RNF180Q86T96 592 aa19.69■□□□□ 0.74
COMMD4-220ENST00000567720 FAM177A1Q8N128 213 aaPredicted RBP19.69■□□□□ 0.74
COMMD4-220ENST00000567720 BICD2Q8TD16 824 aa19.69■□□□□ 0.74
COMMD4-220ENST00000567720 CRYGNQ8WXF5 182 aa19.69■□□□□ 0.74
COMMD4-220ENST00000567720 LLPHQ9BRT6 129 aaKnown RBP19.69■□□□□ 0.74
COMMD4-220ENST00000567720 C11orf49Q9H6J7 331 aa19.69■□□□□ 0.74
COMMD4-220ENST00000567720 PCDHA4Q9UN74 947 aa19.69■□□□□ 0.74
COMMD4-220ENST00000567720 CEP290O15078 2479 aa19.68■□□□□ 0.74
COMMD4-220ENST00000567720 NKRFO15226 690 aaKnown RBP eCLIP19.68■□□□□ 0.74
COMMD4-220ENST00000567720 UBA1P22314 1058 aaKnown RBP19.68■□□□□ 0.74
COMMD4-220ENST00000567720 BEX3Q00994 111 aa19.68■□□□□ 0.74
COMMD4-220ENST00000567720 ARHGAP1Q07960 439 aa19.68■□□□□ 0.74
COMMD4-220ENST00000567720 OR6J1Q8NGC5 347 aa19.68■□□□□ 0.74
COMMD4-220ENST00000567720 WASF1Q92558 559 aa19.68■□□□□ 0.74
COMMD4-220ENST00000567720 RTEL1Q9NZ71 1219 aa19.68■□□□□ 0.74
COMMD4-220ENST00000567720 DDX41Q9UJV9 622 aaKnown RBP19.68■□□□□ 0.74
COMMD4-220ENST00000567720 PHF24Q9UPV7 400 aa19.68■□□□□ 0.74
COMMD4-220ENST00000567720 Q9Y3F1 56 aa19.68■□□□□ 0.74
COMMD4-220ENST00000567720 DYNC1LI2O43237 492 aaPredicted RBP19.67■□□□□ 0.74
COMMD4-220ENST00000567720 ITGB5P18084 799 aa19.67■□□□□ 0.74
COMMD4-220ENST00000567720 MCM2P49736 904 aa19.67■□□□□ 0.74
COMMD4-220ENST00000567720 FOSBP53539 338 aa19.67■□□□□ 0.74
COMMD4-220ENST00000567720 ARHGAP4P98171 946 aa19.67■□□□□ 0.74
COMMD4-220ENST00000567720 FSCN1Q16658 493 aaKnown RBP19.67■□□□□ 0.74
COMMD4-220ENST00000567720 GNPTABQ3T906 1256 aa19.67■□□□□ 0.74
COMMD4-220ENST00000567720 BLIDQ8IZY5 108 aa19.67■□□□□ 0.74
COMMD4-220ENST00000567720 SPC25Q9HBM1 224 aa19.67■□□□□ 0.74
COMMD4-220ENST00000567720 UBIAD1Q9Y5Z9 338 aa19.67■□□□□ 0.74
COMMD4-220ENST00000567720 LTBP2Q14767 1821 aa19.67■□□□□ 0.74
COMMD4-220ENST00000567720 A0A1W2PQ45 241 aaPredicted RBP19.66■□□□□ 0.74
COMMD4-220ENST00000567720 A0A1W2PQY0 241 aa19.66■□□□□ 0.74
COMMD4-220ENST00000567720 FIBPO43427 364 aa19.66■□□□□ 0.74
COMMD4-220ENST00000567720 ICAM3P32942 547 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms