RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 PBX2P40425 430 aa21.58■■□□□ 1.05
LINC01238-205ENST00000567549 CHMP4BP1P59074 171 aa21.58■■□□□ 1.05
LINC01238-205ENST00000567549 PTGISQ16647 500 aa21.58■■□□□ 1.05
LINC01238-205ENST00000567549 LY6KQ17RY6 165 aa21.58■■□□□ 1.05
LINC01238-205ENST00000567549 PPP2R2DQ66LE6 453 aa21.58■■□□□ 1.05
LINC01238-205ENST00000567549 C7orf31Q8N865 590 aa21.58■■□□□ 1.05
LINC01238-205ENST00000567549 PPTC7Q8NI37 304 aa21.58■■□□□ 1.05
LINC01238-205ENST00000567549 CXXC1Q9P0U4 656 aaPredicted RBP21.58■■□□□ 1.05
LINC01238-205ENST00000567549 PALM3A6NDB9 673 aaPredicted RBP21.57■■□□□ 1.04
LINC01238-205ENST00000567549 GCOM1H8Y6P7 765 aaPredicted RBP21.57■■□□□ 1.04
LINC01238-205ENST00000567549 ARIH2O95376 493 aa21.57■■□□□ 1.04
LINC01238-205ENST00000567549 POLR2MP0CAP2 368 aa21.57■■□□□ 1.04
LINC01238-205ENST00000567549 CHMLP26374 656 aa21.57■■□□□ 1.04
LINC01238-205ENST00000567549 ARHGAP1Q07960 439 aa21.57■■□□□ 1.04
LINC01238-205ENST00000567549 GRM4Q14833 912 aa21.57■■□□□ 1.04
LINC01238-205ENST00000567549 TMEM67Q5HYA8 995 aa21.57■■□□□ 1.04
LINC01238-205ENST00000567549 CHST3Q7LGC8 479 aa21.57■■□□□ 1.04
LINC01238-205ENST00000567549 DEFB128Q7Z7B8 93 aa21.57■■□□□ 1.04
LINC01238-205ENST00000567549 MTMR8Q96EF0 704 aa21.57■■□□□ 1.04
LINC01238-205ENST00000567549 NKX2-4Q9H2Z4 354 aa21.57■■□□□ 1.04
LINC01238-205ENST00000567549 PRDM12Q9H4Q4 367 aa21.57■■□□□ 1.04
LINC01238-205ENST00000567549 MAD2L2Q9UI95 211 aa21.57■■□□□ 1.04
LINC01238-205ENST00000567549 TANC1Q9C0D5 1861 aa21.57■■□□□ 1.04
LINC01238-205ENST00000567549 STAM2O75886 525 aa21.56■■□□□ 1.04
LINC01238-205ENST00000567549 IQCF3P0C7M6 154 aa21.56■■□□□ 1.04
LINC01238-205ENST00000567549 GSPT1P15170 499 aaKnown RBP21.56■■□□□ 1.04
LINC01238-205ENST00000567549 CCND2P30279 289 aa21.56■■□□□ 1.04
LINC01238-205ENST00000567549 KIF5BP33176 963 aa21.56■■□□□ 1.04
LINC01238-205ENST00000567549 KCNJ6P48051 423 aa21.56■■□□□ 1.04
LINC01238-205ENST00000567549 GNPTABQ3T906 1256 aa21.56■■□□□ 1.04
LINC01238-205ENST00000567549 STOX1Q6ZVD7 989 aa21.56■■□□□ 1.04
LINC01238-205ENST00000567549 HOMER1Q86YM7 354 aa21.56■■□□□ 1.04
LINC01238-205ENST00000567549 STAG2Q8N3U4 1231 aa21.56■■□□□ 1.04
LINC01238-205ENST00000567549 TBC1D5Q92609 795 aa21.56■■□□□ 1.04
LINC01238-205ENST00000567549 MTA3Q9BTC8 594 aa21.56■■□□□ 1.04
LINC01238-205ENST00000567549 COL20A1Q9P218 1284 aa21.56■■□□□ 1.04
LINC01238-205ENST00000567549 DDX41Q9UJV9 622 aaKnown RBP21.56■■□□□ 1.04
LINC01238-205ENST00000567549 PNMA6FA0A0J9YX94 578 aa21.55■■□□□ 1.04
LINC01238-205ENST00000567549 EFCAB14O75071 495 aa21.55■■□□□ 1.04
LINC01238-205ENST00000567549 CYP21A2P08686 494 aa21.55■■□□□ 1.04
LINC01238-205ENST00000567549 TJAP1Q5JTD0 557 aa21.55■■□□□ 1.04
LINC01238-205ENST00000567549 CASC1Q6TDU7 716 aa21.55■■□□□ 1.04
LINC01238-205ENST00000567549 CYB5R4Q7L1T6 521 aa21.55■■□□□ 1.04
LINC01238-205ENST00000567549 TMTC2Q8N394 836 aa21.55■■□□□ 1.04
LINC01238-205ENST00000567549 IL27Q8NEV9 243 aa21.55■■□□□ 1.04
LINC01238-205ENST00000567549 CTCFLQ8NI51 663 aaPredicted RBP21.55■■□□□ 1.04
LINC01238-205ENST00000567549 ATXN2LQ8WWM7 1075 aaKnown RBP21.55■■□□□ 1.04
LINC01238-205ENST00000567549 MAP3K14Q99558 947 aa21.55■■□□□ 1.04
LINC01238-205ENST00000567549 PDCD2LQ9BRP1 358 aa21.55■■□□□ 1.04
LINC01238-205ENST00000567549 RIOX1Q9H6W3 641 aa21.55■■□□□ 1.04
LINC01238-205ENST00000567549 GBF1Q92538 1859 aa21.54■■□□□ 1.04
LINC01238-205ENST00000567549 UNC80Q8N2C7 3258 aa21.54■■□□□ 1.04
LINC01238-205ENST00000567549 PPFIA4O75335 1185 aa21.54■■□□□ 1.04
LINC01238-205ENST00000567549 MYCLP12524 364 aaPredicted RBP21.54■■□□□ 1.04
LINC01238-205ENST00000567549 IGFBP4P22692 258 aa21.54■■□□□ 1.04
LINC01238-205ENST00000567549 CUL5Q93034 780 aa21.54■■□□□ 1.04
LINC01238-205ENST00000567549 SEC63Q9UGP8 760 aaKnown RBP21.54■■□□□ 1.04
LINC01238-205ENST00000567549 E7EWF7 191 aa21.53■■□□□ 1.04
LINC01238-205ENST00000567549 SGSM2O43147 1006 aa21.53■■□□□ 1.04
LINC01238-205ENST00000567549 SELPP16109 830 aa21.53■■□□□ 1.04
LINC01238-205ENST00000567549 PDE4AP27815 886 aa21.53■■□□□ 1.04
LINC01238-205ENST00000567549 GNAQP50148 359 aa21.53■■□□□ 1.04
LINC01238-205ENST00000567549 PGM5Q15124 567 aa21.53■■□□□ 1.04
LINC01238-205ENST00000567549 LZTS2Q9BRK4 669 aa21.53■■□□□ 1.04
LINC01238-205ENST00000567549 THEGQ9P2T0 379 aa21.53■■□□□ 1.04
LINC01238-205ENST00000567549 GTF2IRD1Q9UHL9 959 aa21.53■■□□□ 1.04
LINC01238-205ENST00000567549 MYH7BA7E2Y1 1941 aa21.53■■□□□ 1.04
LINC01238-205ENST00000567549 GTPBP6O43824 516 aaPredicted RBP21.52■■□□□ 1.04
LINC01238-205ENST00000567549 DDAH1O94760 285 aa21.52■■□□□ 1.04
LINC01238-205ENST00000567549 F2P00734 622 aa21.52■■□□□ 1.04
LINC01238-205ENST00000567549 PSEN2P49810 448 aa21.52■■□□□ 1.04
LINC01238-205ENST00000567549 RBL2Q08999 1139 aa21.52■■□□□ 1.04
LINC01238-205ENST00000567549 MFSD10Q14728 455 aa21.52■■□□□ 1.04
LINC01238-205ENST00000567549 LRRC8DQ7L1W4 858 aa21.52■■□□□ 1.04
LINC01238-205ENST00000567549 VSIG10LQ86VR7 867 aa21.52■■□□□ 1.04
LINC01238-205ENST00000567549 RRP36Q96EU6 259 aaKnown RBP21.52■■□□□ 1.04
LINC01238-205ENST00000567549 SPATA33Q96N06 139 aa21.52■■□□□ 1.04
LINC01238-205ENST00000567549 PIGSQ96S52 555 aa21.52■■□□□ 1.04
LINC01238-205ENST00000567549 MLXIPQ9HAP2 919 aa21.52■■□□□ 1.04
LINC01238-205ENST00000567549 SMARCA1P28370 1054 aa21.51■■□□□ 1.03
LINC01238-205ENST00000567549 PTK7Q13308 1070 aa21.51■■□□□ 1.03
LINC01238-205ENST00000567549 KIAA0753Q2KHM9 967 aa21.51■■□□□ 1.03
LINC01238-205ENST00000567549 CELF3Q5SZQ8 465 aaKnown RBP21.51■■□□□ 1.03
LINC01238-205ENST00000567549 MAP4K1Q92918 833 aa21.51■■□□□ 1.03
LINC01238-205ENST00000567549 YBX2Q9Y2T7 364 aaKnown RBP21.51■■□□□ 1.03
LINC01238-205ENST00000567549 SCN5AQ14524 2016 aa21.5■■□□□ 1.03
LINC01238-205ENST00000567549 NOP56O00567 594 aaKnown RBP21.5■■□□□ 1.03
LINC01238-205ENST00000567549 CALM1P0DP23 149 aa21.5■■□□□ 1.03
LINC01238-205ENST00000567549 CALM2P0DP24 149 aa21.5■■□□□ 1.03
LINC01238-205ENST00000567549 CALM3P0DP25 149 aa21.5■■□□□ 1.03
LINC01238-205ENST00000567549 HOXA13P31271 388 aaPredicted RBP21.5■■□□□ 1.03
LINC01238-205ENST00000567549 PTH1RQ03431 593 aa21.5■■□□□ 1.03
LINC01238-205ENST00000567549 TROAPQ12815 778 aa21.5■■□□□ 1.03
LINC01238-205ENST00000567549 NEDD9Q14511 834 aa21.5■■□□□ 1.03
LINC01238-205ENST00000567549 AAK1Q2M2I8 961 aa21.5■■□□□ 1.03
LINC01238-205ENST00000567549 GDF6Q6KF10 455 aaPredicted RBP21.5■■□□□ 1.03
LINC01238-205ENST00000567549 XRRA1Q6P2D8 792 aa21.5■■□□□ 1.03
LINC01238-205ENST00000567549 PPM1EQ8WY54 764 aa21.5■■□□□ 1.03
LINC01238-205ENST00000567549 ALG1Q9BT22 464 aa21.5■■□□□ 1.03
LINC01238-205ENST00000567549 IL25Q9H293 177 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms