RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 FCHSD1Q86WN1 690 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 FAM177A1Q8N128 213 aaPredicted RBP14.26□□□□□ -0.13
RNF40-211ENST00000567365 CRYGNQ8WXF5 182 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 AIFM3Q96NN9 605 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 MPHOSPH6Q99547 160 aaKnown RBP14.26□□□□□ -0.13
RNF40-211ENST00000567365 XPNPEP3Q9NQH7 507 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 SH3GLB2Q9NR46 395 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 Q9Y3F1 56 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 MYADML2A6NDP7 307 aa14.25□□□□□ -0.13
RNF40-211ENST00000567365 DTNBO60941 627 aa14.25□□□□□ -0.13
RNF40-211ENST00000567365 CDKL5O76039 1030 aa14.25□□□□□ -0.13
RNF40-211ENST00000567365 PGK1P00558 417 aa14.25□□□□□ -0.13
RNF40-211ENST00000567365 GJC2Q5T442 439 aaPredicted RBP14.25□□□□□ -0.13
RNF40-211ENST00000567365 PCNX4Q63HM2 1172 aa14.25□□□□□ -0.13
RNF40-211ENST00000567365 TRIM22Q8IYM9 498 aa14.25□□□□□ -0.13
RNF40-211ENST00000567365 ARRDC4Q8NCT1 418 aa14.25□□□□□ -0.13
RNF40-211ENST00000567365 SMARCC2Q8TAQ2 1214 aa14.25□□□□□ -0.13
RNF40-211ENST00000567365 SCFD2Q8WU76 684 aa14.25□□□□□ -0.13
RNF40-211ENST00000567365 PAWRQ96IZ0 340 aaKnown RBP14.25□□□□□ -0.13
RNF40-211ENST00000567365 INPP4AQ96PE3 977 aaPredicted RBP14.25□□□□□ -0.13
RNF40-211ENST00000567365 GLT8D2Q9H1C3 349 aa14.25□□□□□ -0.13
RNF40-211ENST00000567365 VPS54Q9P1Q0 977 aa14.25□□□□□ -0.13
RNF40-211ENST00000567365 PCDHA6Q9UN73 950 aa14.25□□□□□ -0.13
RNF40-211ENST00000567365 PCDHA8Q9Y5H6 950 aa14.25□□□□□ -0.13
RNF40-211ENST00000567365 M0R2N6 131 aa14.24□□□□□ -0.13
RNF40-211ENST00000567365 EDIL3O43854 480 aa14.24□□□□□ -0.13
RNF40-211ENST00000567365 STAM2O75886 525 aa14.24□□□□□ -0.13
RNF40-211ENST00000567365 ICAM3P32942 547 aa14.24□□□□□ -0.13
RNF40-211ENST00000567365 ADCY7P51828 1080 aa14.24□□□□□ -0.13
RNF40-211ENST00000567365 AKAP17AQ02040 695 aaKnown RBP14.24□□□□□ -0.13
RNF40-211ENST00000567365 AP3B2Q13367 1082 aa14.24□□□□□ -0.13
RNF40-211ENST00000567365 XRRA1Q6P2D8 792 aa14.24□□□□□ -0.13
RNF40-211ENST00000567365 CCDC12Q8WUD4 166 aaPredicted RBP14.24□□□□□ -0.13
RNF40-211ENST00000567365 ZSCAN31Q96LW9 406 aaPredicted RBP14.24□□□□□ -0.13
RNF40-211ENST00000567365 WDR11Q9BZH6 1224 aa14.24□□□□□ -0.13
RNF40-211ENST00000567365 DDX41Q9UJV9 622 aaKnown RBP14.24□□□□□ -0.13
RNF40-211ENST00000567365 PHF24Q9UPV7 400 aa14.24□□□□□ -0.13
RNF40-211ENST00000567365 CEP290O15078 2479 aa14.23□□□□□ -0.13
RNF40-211ENST00000567365 H0YGN5 161 aa14.23□□□□□ -0.13
RNF40-211ENST00000567365 JAK2O60674 1132 aa14.23□□□□□ -0.13
RNF40-211ENST00000567365 FOSP01100 380 aaPredicted RBP14.23□□□□□ -0.13
RNF40-211ENST00000567365 CCND2P30279 289 aa14.23□□□□□ -0.13
RNF40-211ENST00000567365 SREBF1P36956 1147 aa14.23□□□□□ -0.13
RNF40-211ENST00000567365 SEMA3FQ13275 785 aa14.23□□□□□ -0.13
RNF40-211ENST00000567365 NECAB2Q7Z6G3 386 aa14.23□□□□□ -0.13
RNF40-211ENST00000567365 DAGLBQ8NCG7 672 aa14.23□□□□□ -0.13
RNF40-211ENST00000567365 CCDC148Q8NFR7 591 aa14.23□□□□□ -0.13
RNF40-211ENST00000567365 TSEN34Q9BSV6 310 aaKnown RBP14.23□□□□□ -0.13
RNF40-211ENST00000567365 ANO3Q9BYT9 981 aa14.23□□□□□ -0.13
RNF40-211ENST00000567365 SH2B1Q9NRF2 756 aaPredicted RBP14.23□□□□□ -0.13
RNF40-211ENST00000567365 TMEM260Q9NX78 707 aa14.23□□□□□ -0.13
RNF40-211ENST00000567365 MYH7BA7E2Y1 1941 aa14.23□□□□□ -0.13
RNF40-211ENST00000567365 RANBP2P49792 3224 aaKnown RBP14.22□□□□□ -0.13
RNF40-211ENST00000567365 SPDYE3A6NKU9 549 aa14.22□□□□□ -0.13
RNF40-211ENST00000567365 NKRFO15226 690 aaKnown RBP eCLIP14.22□□□□□ -0.13
RNF40-211ENST00000567365 MYCLP12524 364 aaPredicted RBP14.22□□□□□ -0.13
RNF40-211ENST00000567365 GNA11P29992 359 aa14.22□□□□□ -0.13
RNF40-211ENST00000567365 SP2Q02086 613 aa14.22□□□□□ -0.13
RNF40-211ENST00000567365 ARHGAP1Q07960 439 aa14.22□□□□□ -0.13
RNF40-211ENST00000567365 TTLL4Q14679 1199 aa14.22□□□□□ -0.13
RNF40-211ENST00000567365 SEPT14Q6ZU15 432 aa14.22□□□□□ -0.13
RNF40-211ENST00000567365 RNF180Q86T96 592 aa14.22□□□□□ -0.13
RNF40-211ENST00000567365 TLK2Q86UE8 772 aa14.22□□□□□ -0.13
RNF40-211ENST00000567365 COPS5Q92905 334 aa14.22□□□□□ -0.13
RNF40-211ENST00000567365 EMID1Q96A84 441 aaPredicted RBP14.22□□□□□ -0.13
RNF40-211ENST00000567365 ZFP91Q96JP5 570 aaPredicted RBP14.22□□□□□ -0.13
RNF40-211ENST00000567365 LLPHQ9BRT6 129 aaKnown RBP14.22□□□□□ -0.13
RNF40-211ENST00000567365 C6orf50Q9HD87 102 aa14.22□□□□□ -0.13
RNF40-211ENST00000567365 GJB4Q9NTQ9 266 aa14.22□□□□□ -0.13
RNF40-211ENST00000567365 ORC3Q9UBD5 711 aaPredicted RBP14.22□□□□□ -0.13
RNF40-211ENST00000567365 UBIAD1Q9Y5Z9 338 aa14.22□□□□□ -0.13
RNF40-211ENST00000567365 SPATA31C2B4DYI2 1134 aa14.21□□□□□ -0.13
RNF40-211ENST00000567365 DYNC1LI2O43237 492 aaPredicted RBP14.21□□□□□ -0.13
RNF40-211ENST00000567365 ST18O60284 1047 aa14.21□□□□□ -0.13
RNF40-211ENST00000567365 TXNP10599 105 aaKnown RBP14.21□□□□□ -0.13
RNF40-211ENST00000567365 TGFB3P10600 412 aa14.21□□□□□ -0.13
RNF40-211ENST00000567365 ITGB5P18084 799 aa14.21□□□□□ -0.13
RNF40-211ENST00000567365 SNX17Q15036 470 aa14.21□□□□□ -0.13
RNF40-211ENST00000567365 FSCN1Q16658 493 aaKnown RBP14.21□□□□□ -0.13
RNF40-211ENST00000567365 MCTP2Q6DN12 878 aa14.21□□□□□ -0.13
RNF40-211ENST00000567365 GALNT17Q6IS24 598 aa14.21□□□□□ -0.13
RNF40-211ENST00000567365 CCDC83Q8IWF9 413 aa14.21□□□□□ -0.13
RNF40-211ENST00000567365 REXO1Q8N1G1 1221 aaKnown RBP14.21□□□□□ -0.13
RNF40-211ENST00000567365 RASGRP4Q8TDF6 673 aa14.21□□□□□ -0.13
RNF40-211ENST00000567365 TMX3Q96JJ7 454 aa14.21□□□□□ -0.13
RNF40-211ENST00000567365 PGBD1Q96JS3 809 aa14.21□□□□□ -0.13
RNF40-211ENST00000567365 PHF20Q9BVI0 1012 aa14.21□□□□□ -0.13
RNF40-211ENST00000567365 C11orf49Q9H6J7 331 aa14.21□□□□□ -0.13
RNF40-211ENST00000567365 PCDHA4Q9UN74 947 aa14.21□□□□□ -0.13
RNF40-211ENST00000567365 SCN10AQ9Y5Y9 1956 aa14.2□□□□□ -0.14
RNF40-211ENST00000567365 MOXD2PA6NHM9 499 aa14.2□□□□□ -0.14
RNF40-211ENST00000567365 A6NJR5 290 aa14.2□□□□□ -0.14
RNF40-211ENST00000567365 CYP3A4P08684 503 aa14.2□□□□□ -0.14
RNF40-211ENST00000567365 C6orf222P0C671 652 aaPredicted RBP14.2□□□□□ -0.14
RNF40-211ENST00000567365 HOXD8P13378 290 aaPredicted RBP14.2□□□□□ -0.14
RNF40-211ENST00000567365 MCM2P49736 904 aa14.2□□□□□ -0.14
RNF40-211ENST00000567365 KCNA10Q16322 511 aa14.2□□□□□ -0.14
RNF40-211ENST00000567365 LY6KQ17RY6 165 aa14.2□□□□□ -0.14
RNF40-211ENST00000567365 JAKMIP3Q5VZ66 844 aa14.2□□□□□ -0.14
RNF40-211ENST00000567365 KCNV1Q6PIU1 500 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms