RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 OSBPL2Q9H1P3 480 aa12.33□□□□□ -0.44
NIFKP4-201ENST00000567275 NUDT5Q9UKK9 219 aa12.33□□□□□ -0.44
NIFKP4-201ENST00000567275 FAM221BA6H8Z2 402 aa12.32□□□□□ -0.44
NIFKP4-201ENST00000567275 BCL6P41182 706 aa12.32□□□□□ -0.44
NIFKP4-201ENST00000567275 IPO9Q96P70 1041 aaKnown RBP12.32□□□□□ -0.44
NIFKP4-201ENST00000567275 CDC6Q99741 560 aa12.32□□□□□ -0.44
NIFKP4-201ENST00000567275 CNTD2Q9H8S5 307 aa12.32□□□□□ -0.44
NIFKP4-201ENST00000567275 RXFP1Q9HBX9 757 aa12.32□□□□□ -0.44
NIFKP4-201ENST00000567275 PCDHA2Q9Y5H9 948 aa12.32□□□□□ -0.44
NIFKP4-201ENST00000567275 KDM2BQ8NHM5 1336 aa12.32□□□□□ -0.44
NIFKP4-201ENST00000567275 C22orf46C9J442 243 aa12.31□□□□□ -0.44
NIFKP4-201ENST00000567275 DIAPH1O60610 1272 aaKnown RBP12.31□□□□□ -0.44
NIFKP4-201ENST00000567275 KRT1P04264 644 aa12.31□□□□□ -0.44
NIFKP4-201ENST00000567275 YOD1Q5VVQ6 348 aaPredicted RBP12.31□□□□□ -0.44
NIFKP4-201ENST00000567275 ANKLE2Q86XL3 938 aa12.31□□□□□ -0.44
NIFKP4-201ENST00000567275 PLEKHO2Q8TD55 490 aa12.31□□□□□ -0.44
NIFKP4-201ENST00000567275 OSBP2Q969R2 916 aa12.31□□□□□ -0.44
NIFKP4-201ENST00000567275 GRIN2AQ12879 1464 aa12.3□□□□□ -0.44
NIFKP4-201ENST00000567275 NTRK1P04629 796 aa12.3□□□□□ -0.44
NIFKP4-201ENST00000567275 LCP1P13796 627 aa12.3□□□□□ -0.44
NIFKP4-201ENST00000567275 PRR5P85299 388 aa12.3□□□□□ -0.44
NIFKP4-201ENST00000567275 CEP68Q76N32 757 aa12.3□□□□□ -0.44
NIFKP4-201ENST00000567275 ZBTB38Q8NAP3 1195 aaPredicted RBP12.3□□□□□ -0.44
NIFKP4-201ENST00000567275 TRMT2BQ96GJ1 504 aaKnown RBP12.3□□□□□ -0.44
NIFKP4-201ENST00000567275 PEX11GQ96HA9 241 aa12.3□□□□□ -0.44
NIFKP4-201ENST00000567275 TMEM169Q96HH4 297 aa12.3□□□□□ -0.44
NIFKP4-201ENST00000567275 KRTAP9-2Q9BYQ4 174 aa12.3□□□□□ -0.44
NIFKP4-201ENST00000567275 GCM1Q9NP62 436 aa12.3□□□□□ -0.44
NIFKP4-201ENST00000567275 NPFFR2Q9Y5X5 522 aa12.3□□□□□ -0.44
NIFKP4-201ENST00000567275 HCFC2Q9Y5Z7 792 aa12.3□□□□□ -0.44
NIFKP4-201ENST00000567275 NUP160Q12769 1436 aa12.29□□□□□ -0.44
NIFKP4-201ENST00000567275 FPR2P25090 351 aa12.29□□□□□ -0.44
NIFKP4-201ENST00000567275 ZNF200P98182 395 aaPredicted RBP12.29□□□□□ -0.44
NIFKP4-201ENST00000567275 LSAMPQ13449 338 aa12.29□□□□□ -0.44
NIFKP4-201ENST00000567275 SMG5Q9UPR3 1016 aaKnown RBP12.29□□□□□ -0.44
NIFKP4-201ENST00000567275 DBX1A6NMT0 343 aa12.28□□□□□ -0.44
NIFKP4-201ENST00000567275 ADCY3O60266 1144 aa12.28□□□□□ -0.44
NIFKP4-201ENST00000567275 LDHDQ86WU2 507 aa12.28□□□□□ -0.44
NIFKP4-201ENST00000567275 DCAF4Q8WV16 495 aa12.28□□□□□ -0.44
NIFKP4-201ENST00000567275 DNAJC7Q99615 494 aa12.28□□□□□ -0.44
NIFKP4-201ENST00000567275 PHF20Q9BVI0 1012 aa12.28□□□□□ -0.44
NIFKP4-201ENST00000567275 CD320Q9NPF0 282 aa12.28□□□□□ -0.44
NIFKP4-201ENST00000567275 GPR27Q9NS67 375 aa12.28□□□□□ -0.44
NIFKP4-201ENST00000567275 COA3Q9Y2R0 106 aaPredicted RBP12.28□□□□□ -0.44
NIFKP4-201ENST00000567275 FHAD1B1AJZ9 1412 aa12.28□□□□□ -0.44
NIFKP4-201ENST00000567275 NPIPB6E9PJ23 425 aa12.27□□□□□ -0.45
NIFKP4-201ENST00000567275 N4BP3O15049 544 aa12.27□□□□□ -0.45
NIFKP4-201ENST00000567275 CDR1P51861 262 aa12.27□□□□□ -0.45
NIFKP4-201ENST00000567275 EPHB3P54753 998 aa12.27□□□□□ -0.45
NIFKP4-201ENST00000567275 NFE2L2Q16236 605 aa12.27□□□□□ -0.45
NIFKP4-201ENST00000567275 KCNA10Q16322 511 aa12.27□□□□□ -0.45
NIFKP4-201ENST00000567275 DCP2Q8IU60 420 aaKnown RBP12.27□□□□□ -0.45
NIFKP4-201ENST00000567275 MZB1Q8WU39 189 aa12.27□□□□□ -0.45
NIFKP4-201ENST00000567275 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
NIFKP4-201ENST00000567275 TOP2BQ02880 1626 aa12.26□□□□□ -0.45
NIFKP4-201ENST00000567275 TRBV23-1A0A0A0MS06 115 aa12.26□□□□□ -0.45
NIFKP4-201ENST00000567275 MROH9Q5TGP6 573 aa12.26□□□□□ -0.45
NIFKP4-201ENST00000567275 RSPO2Q6UXX9 243 aaPredicted RBP12.26□□□□□ -0.45
NIFKP4-201ENST00000567275 DPH6Q7L8W6 267 aa12.26□□□□□ -0.45
NIFKP4-201ENST00000567275 NLRP10Q86W26 655 aa12.26□□□□□ -0.45
NIFKP4-201ENST00000567275 SCUBE1Q8IWY4 988 aa12.26□□□□□ -0.45
NIFKP4-201ENST00000567275 ALG3Q92685 438 aa12.26□□□□□ -0.45
NIFKP4-201ENST00000567275 AP5M1Q9H0R1 490 aa12.26□□□□□ -0.45
NIFKP4-201ENST00000567275 CLDND1Q9NY35 253 aa12.26□□□□□ -0.45
NIFKP4-201ENST00000567275 FBXL7Q9UJT9 491 aa12.26□□□□□ -0.45
NIFKP4-201ENST00000567275 CNOT6Q9ULM6 557 aaKnown RBP12.26□□□□□ -0.45
NIFKP4-201ENST00000567275 ERICH3Q5RHP9 1530 aa12.26□□□□□ -0.45
NIFKP4-201ENST00000567275 BIVM-ERCC5R4GMW8 1640 aa12.26□□□□□ -0.45
NIFKP4-201ENST00000567275 BLACEA4D250 179 aa12.25□□□□□ -0.45
NIFKP4-201ENST00000567275 ZBTB7AO95365 584 aa12.25□□□□□ -0.45
NIFKP4-201ENST00000567275 FAM153BP0C7A2 387 aa12.25□□□□□ -0.45
NIFKP4-201ENST00000567275 NCKAP1LP55160 1127 aa12.25□□□□□ -0.45
NIFKP4-201ENST00000567275 BMS1Q14692 1282 aaKnown RBP12.25□□□□□ -0.45
NIFKP4-201ENST00000567275 SLC9A5Q14940 896 aa12.25□□□□□ -0.45
NIFKP4-201ENST00000567275 TOX2Q96NM4 488 aa12.25□□□□□ -0.45
NIFKP4-201ENST00000567275 KRTAP4-12Q9BQ66 201 aa12.25□□□□□ -0.45
NIFKP4-201ENST00000567275 SIT1Q9Y3P8 196 aa12.25□□□□□ -0.45
NIFKP4-201ENST00000567275 IRAK3Q9Y616 596 aa12.25□□□□□ -0.45
NIFKP4-201ENST00000567275 H7BY64 318 aa12.24□□□□□ -0.45
NIFKP4-201ENST00000567275 NTRK3Q16288 839 aa12.24□□□□□ -0.45
NIFKP4-201ENST00000567275 Q8N1Y9 231 aa12.24□□□□□ -0.45
NIFKP4-201ENST00000567275 TSPAN17Q96FV3 270 aa12.24□□□□□ -0.45
NIFKP4-201ENST00000567275 SIGLEC10Q96LC7 697 aa12.24□□□□□ -0.45
NIFKP4-201ENST00000567275 CDK11AQ9UQ88 783 aaPredicted RBP12.24□□□□□ -0.45
NIFKP4-201ENST00000567275 X6R8D5 127 aa12.24□□□□□ -0.45
NIFKP4-201ENST00000567275 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.23□□□□□ -0.45
NIFKP4-201ENST00000567275 PFKLP17858 780 aa12.23□□□□□ -0.45
NIFKP4-201ENST00000567275 LINC00310P59036 64 aa12.23□□□□□ -0.45
NIFKP4-201ENST00000567275 SUMO1P63165 101 aaKnown RBP12.23□□□□□ -0.45
NIFKP4-201ENST00000567275 TARBP2Q15633 366 aaKnown RBP12.23□□□□□ -0.45
NIFKP4-201ENST00000567275 LONRF2Q1L5Z9 754 aa12.23□□□□□ -0.45
NIFKP4-201ENST00000567275 FAM209AQ5JX71 171 aa12.23□□□□□ -0.45
NIFKP4-201ENST00000567275 FOXB2Q5VYV0 432 aa12.23□□□□□ -0.45
NIFKP4-201ENST00000567275 KCNT2Q6UVM3 1135 aa12.23□□□□□ -0.45
NIFKP4-201ENST00000567275 RIOX2Q8IUF8 465 aa12.23□□□□□ -0.45
NIFKP4-201ENST00000567275 ZSWIM4Q9H7M6 989 aa12.23□□□□□ -0.45
NIFKP4-201ENST00000567275 PCDHA5Q9Y5H7 936 aa12.23□□□□□ -0.45
NIFKP4-201ENST00000567275 SHROOM2Q13796 1616 aa12.22□□□□□ -0.45
NIFKP4-201ENST00000567275 MSCO60682 206 aa12.22□□□□□ -0.45
NIFKP4-201ENST00000567275 KRTAP19-1Q8IUB9 90 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms