RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 ALDH5A1P51649 535 aaPredicted RBP19.14■□□□□ 0.65
CLN6-208ENST00000567060 ATN1P54259 1190 aaPredicted RBP19.14■□□□□ 0.65
CLN6-208ENST00000567060 NLRP5P59047 1200 aa19.14■□□□□ 0.65
CLN6-208ENST00000567060 TRIM29Q14134 588 aa19.14■□□□□ 0.65
CLN6-208ENST00000567060 XRRA1Q6P2D8 792 aa19.14■□□□□ 0.65
CLN6-208ENST00000567060 TRPV1Q8NER1 839 aa19.14■□□□□ 0.65
CLN6-208ENST00000567060 TINF2Q9BSI4 451 aa19.14■□□□□ 0.65
CLN6-208ENST00000567060 BRMS1Q9HCU9 246 aa19.14■□□□□ 0.65
CLN6-208ENST00000567060 VPS54Q9P1Q0 977 aa19.14■□□□□ 0.65
CLN6-208ENST00000567060 DDX20Q9UHI6 824 aaKnown RBP19.14■□□□□ 0.65
CLN6-208ENST00000567060 FRMPD4Q14CM0 1322 aa19.14■□□□□ 0.65
CLN6-208ENST00000567060 MUC3AQ02505 3323 aa19.13■□□□□ 0.65
CLN6-208ENST00000567060 JAK2O60674 1132 aa19.13■□□□□ 0.65
CLN6-208ENST00000567060 STAM2O75886 525 aa19.13■□□□□ 0.65
CLN6-208ENST00000567060 PDIA4P13667 645 aaKnown RBP19.13■□□□□ 0.65
CLN6-208ENST00000567060 EDNRBP24530 442 aa19.13■□□□□ 0.65
CLN6-208ENST00000567060 CNTN2Q02246 1040 aa19.13■□□□□ 0.65
CLN6-208ENST00000567060 BECN1Q14457 450 aa19.13■□□□□ 0.65
CLN6-208ENST00000567060 REXO1Q8N1G1 1221 aaKnown RBP19.13■□□□□ 0.65
CLN6-208ENST00000567060 TBC1D5Q92609 795 aa19.13■□□□□ 0.65
CLN6-208ENST00000567060 FGD4Q96M96 766 aa19.13■□□□□ 0.65
CLN6-208ENST00000567060 RMDN3Q96TC7 470 aa19.13■□□□□ 0.65
CLN6-208ENST00000567060 LBHD1Q9BQE6 289 aaPredicted RBP19.13■□□□□ 0.65
CLN6-208ENST00000567060 PHF20Q9BVI0 1012 aa19.13■□□□□ 0.65
CLN6-208ENST00000567060 PCDHA4Q9UN74 947 aa19.13■□□□□ 0.65
CLN6-208ENST00000567060 SMC3Q9UQE7 1217 aa19.13■□□□□ 0.65
CLN6-208ENST00000567060 LCTP09848 1927 aa19.13■□□□□ 0.65
CLN6-208ENST00000567060 SOWAHBA6NEL2 793 aa19.12■□□□□ 0.65
CLN6-208ENST00000567060 CYP2C19P33261 490 aa19.12■□□□□ 0.65
CLN6-208ENST00000567060 CLK2P49760 499 aaKnown RBP19.12■□□□□ 0.65
CLN6-208ENST00000567060 ARHGEF16Q5VV41 709 aa19.12■□□□□ 0.65
CLN6-208ENST00000567060 ABHD16BQ9H3Z7 469 aa19.12■□□□□ 0.65
CLN6-208ENST00000567060 PXMP2Q9NR77 195 aa19.12■□□□□ 0.65
CLN6-208ENST00000567060 FRMPD3Q5JV73 1810 aa19.11■□□□□ 0.65
CLN6-208ENST00000567060 PDCP20941 246 aa19.11■□□□□ 0.65
CLN6-208ENST00000567060 USP17L6PQ6QN14 398 aa19.11■□□□□ 0.65
CLN6-208ENST00000567060 ARMCX2Q7L311 632 aa19.11■□□□□ 0.65
CLN6-208ENST00000567060 C8orf76Q96K31 380 aa19.11■□□□□ 0.65
CLN6-208ENST00000567060 COL20A1Q9P218 1284 aa19.11■□□□□ 0.65
CLN6-208ENST00000567060 CNPY2Q9Y2B0 182 aa19.11■□□□□ 0.65
CLN6-208ENST00000567060 DNM1LO00429 736 aa19.1■□□□□ 0.65
CLN6-208ENST00000567060 PPFIA3O75145 1194 aa19.1■□□□□ 0.65
CLN6-208ENST00000567060 CNGA1P29973 690 aa19.1■□□□□ 0.65
CLN6-208ENST00000567060 HOXA13P31271 388 aaPredicted RBP19.1■□□□□ 0.65
CLN6-208ENST00000567060 RTP1P59025 263 aa19.1■□□□□ 0.65
CLN6-208ENST00000567060 SAFBQ15424 915 aaKnown RBP eCLIP19.1■□□□□ 0.65
CLN6-208ENST00000567060 SHHQ15465 462 aa19.1■□□□□ 0.65
CLN6-208ENST00000567060 BLIDQ8IZY5 108 aa19.1■□□□□ 0.65
CLN6-208ENST00000567060 TAAR1Q96RJ0 339 aa19.1■□□□□ 0.65
CLN6-208ENST00000567060 CDX2Q99626 313 aaPredicted RBP19.1■□□□□ 0.65
CLN6-208ENST00000567060 PDCD2LQ9BRP1 358 aa19.1■□□□□ 0.65
CLN6-208ENST00000567060 VTA1Q9NP79 307 aa19.1■□□□□ 0.65
CLN6-208ENST00000567060 MSCO60682 206 aa19.09■□□□□ 0.65
CLN6-208ENST00000567060 PDE4DQ08499 809 aa19.09■□□□□ 0.65
CLN6-208ENST00000567060 STXBP2Q15833 593 aa19.09■□□□□ 0.65
CLN6-208ENST00000567060 C9orf50Q5SZB4 431 aa19.09■□□□□ 0.65
CLN6-208ENST00000567060 GJC2Q5T442 439 aaPredicted RBP19.09■□□□□ 0.65
CLN6-208ENST00000567060 FCHSD1Q86WN1 690 aa19.09■□□□□ 0.65
CLN6-208ENST00000567060 FBXO18Q8NFZ0 1043 aa19.09■□□□□ 0.65
CLN6-208ENST00000567060 AIFM3Q96NN9 605 aa19.09■□□□□ 0.65
CLN6-208ENST00000567060 SEMA6BQ9H3T3 888 aa19.09■□□□□ 0.65
CLN6-208ENST00000567060 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.09■□□□□ 0.65
CLN6-208ENST00000567060 PCDHA6Q9UN73 950 aa19.09■□□□□ 0.65
CLN6-208ENST00000567060 PCDHA8Q9Y5H6 950 aa19.09■□□□□ 0.65
CLN6-208ENST00000567060 ASTN1O14525 1302 aa19.08■□□□□ 0.65
CLN6-208ENST00000567060 M0R2N6 131 aa19.08■□□□□ 0.64
CLN6-208ENST00000567060 EIF3JO75822 258 aaKnown RBP19.08■□□□□ 0.64
CLN6-208ENST00000567060 MMP1P03956 469 aa19.08■□□□□ 0.64
CLN6-208ENST00000567060 HSP90AA1P07900 732 aaKnown RBP19.08■□□□□ 0.64
CLN6-208ENST00000567060 NR3C2P08235 984 aa19.08■□□□□ 0.64
CLN6-208ENST00000567060 CYBAP13498 195 aa19.08■□□□□ 0.64
CLN6-208ENST00000567060 GJB2P29033 226 aa19.08■□□□□ 0.64
CLN6-208ENST00000567060 CCND2P30279 289 aa19.08■□□□□ 0.64
CLN6-208ENST00000567060 PGM5Q15124 567 aa19.08■□□□□ 0.64
CLN6-208ENST00000567060 ZNF697Q5TEC3 545 aa19.08■□□□□ 0.64
CLN6-208ENST00000567060 PCNX4Q63HM2 1172 aa19.08■□□□□ 0.64
CLN6-208ENST00000567060 KRT40Q6A162 431 aa19.08■□□□□ 0.64
CLN6-208ENST00000567060 SLC39A5Q6ZMH5 540 aa19.08■□□□□ 0.64
CLN6-208ENST00000567060 KRT25Q7Z3Z0 450 aa19.08■□□□□ 0.64
CLN6-208ENST00000567060 VSIG10LQ86VR7 867 aa19.08■□□□□ 0.64
CLN6-208ENST00000567060 ANO3Q9BYT9 981 aa19.08■□□□□ 0.64
CLN6-208ENST00000567060 SNAI1O95863 264 aaPredicted RBP19.07■□□□□ 0.64
CLN6-208ENST00000567060 KRT2P35908 639 aa19.07■□□□□ 0.64
CLN6-208ENST00000567060 SREBF1P36956 1147 aa19.07■□□□□ 0.64
CLN6-208ENST00000567060 NPY5RQ15761 445 aa19.07■□□□□ 0.64
CLN6-208ENST00000567060 UBE2SQ16763 222 aa19.07■□□□□ 0.64
CLN6-208ENST00000567060 KCNV1Q6PIU1 500 aa19.07■□□□□ 0.64
CLN6-208ENST00000567060 ATP11BQ9Y2G3 1177 aa19.07■□□□□ 0.64
CLN6-208ENST00000567060 MCM3APO60318 1980 aa19.06■□□□□ 0.64
CLN6-208ENST00000567060 MAFGO15525 162 aa19.06■□□□□ 0.64
CLN6-208ENST00000567060 EIF2AK2P19525 551 aaKnown RBP19.06■□□□□ 0.64
CLN6-208ENST00000567060 ACVR2BQ13705 512 aa19.06■□□□□ 0.64
CLN6-208ENST00000567060 GNPTABQ3T906 1256 aa19.06■□□□□ 0.64
CLN6-208ENST00000567060 PURBQ96QR8 312 aaKnown RBP19.06■□□□□ 0.64
CLN6-208ENST00000567060 TTYH1Q9H313 450 aaPredicted RBP19.06■□□□□ 0.64
CLN6-208ENST00000567060 FOXP1Q9H334 677 aaPredicted RBP19.06■□□□□ 0.64
CLN6-208ENST00000567060 PRKAG2Q9UGJ0 569 aa19.06■□□□□ 0.64
CLN6-208ENST00000567060 LTBP2Q14767 1821 aa19.06■□□□□ 0.64
CLN6-208ENST00000567060 SEPT4O43236 478 aa19.05■□□□□ 0.64
CLN6-208ENST00000567060 CYP3A4P08684 503 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms