RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 VSIG10LQ86VR7 867 aa16.52■□□□□ 0.24
COMMD4-216ENST00000567023 SESTD1Q86VW0 696 aa16.52■□□□□ 0.24
COMMD4-216ENST00000567023 HOMER1Q86YM7 354 aa16.52■□□□□ 0.24
COMMD4-216ENST00000567023 TMTC2Q8N394 836 aa16.52■□□□□ 0.24
COMMD4-216ENST00000567023 TIFAQ96CG3 184 aa16.52■□□□□ 0.24
COMMD4-216ENST00000567023 ESYT1Q9BSJ8 1104 aa16.52■□□□□ 0.24
COMMD4-216ENST00000567023 PBX4Q9BYU1 374 aa16.52■□□□□ 0.24
COMMD4-216ENST00000567023 LY9Q9HBG7 655 aa16.52■□□□□ 0.24
COMMD4-216ENST00000567023 GCOM1H8Y6P7 765 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-216ENST00000567023 RGS20O76081 388 aa16.51■□□□□ 0.23
COMMD4-216ENST00000567023 PFKMP08237 780 aa16.51■□□□□ 0.23
COMMD4-216ENST00000567023 POLR2MP0CAP2 368 aa16.51■□□□□ 0.23
COMMD4-216ENST00000567023 TGFB3P10600 412 aa16.51■□□□□ 0.23
COMMD4-216ENST00000567023 CASTP20810 708 aaKnown RBP16.51■□□□□ 0.23
COMMD4-216ENST00000567023 LAMC2Q13753 1193 aa16.51■□□□□ 0.23
COMMD4-216ENST00000567023 NECTIN1Q15223 517 aa16.51■□□□□ 0.23
COMMD4-216ENST00000567023 DGKDQ16760 1214 aa16.51■□□□□ 0.23
COMMD4-216ENST00000567023 KCNV1Q6PIU1 500 aa16.51■□□□□ 0.23
COMMD4-216ENST00000567023 SPZ1Q9BXG8 430 aa16.51■□□□□ 0.23
COMMD4-216ENST00000567023 ZNF576Q9H609 170 aa16.51■□□□□ 0.23
COMMD4-216ENST00000567023 CXXC1Q9P0U4 656 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-216ENST00000567023 MRVI1Q9Y6F6 885 aa16.51■□□□□ 0.23
COMMD4-216ENST00000567023 BAZ2BQ9UIF8 2168 aaKnown RBP16.51■□□□□ 0.23
COMMD4-216ENST00000567023 CHD7Q9P2D1 2997 aa16.5■□□□□ 0.23
COMMD4-216ENST00000567023 DDAH1O94760 285 aa16.5■□□□□ 0.23
COMMD4-216ENST00000567023 HOXA13P31271 388 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-216ENST00000567023 MCM5P33992 734 aa16.5■□□□□ 0.23
COMMD4-216ENST00000567023 GRIN2CQ14957 1233 aa16.5■□□□□ 0.23
COMMD4-216ENST00000567023 PGM5Q15124 567 aa16.5■□□□□ 0.23
COMMD4-216ENST00000567023 BMP2KLQ5H9B9 411 aa16.5■□□□□ 0.23
COMMD4-216ENST00000567023 FAM47CQ5HY64 1035 aa16.5■□□□□ 0.23
COMMD4-216ENST00000567023 OTOP2Q7RTS6 562 aa16.5■□□□□ 0.23
COMMD4-216ENST00000567023 ZNF654Q8IZM8 581 aa16.5■□□□□ 0.23
COMMD4-216ENST00000567023 PPTC7Q8NI37 304 aa16.5■□□□□ 0.23
COMMD4-216ENST00000567023 MYLIPQ8WY64 445 aa16.5■□□□□ 0.23
COMMD4-216ENST00000567023 KAT2BQ92831 832 aa16.5■□□□□ 0.23
COMMD4-216ENST00000567023 SCLYQ96I15 445 aa16.5■□□□□ 0.23
COMMD4-216ENST00000567023 TMEM87BQ96K49 555 aa16.5■□□□□ 0.23
COMMD4-216ENST00000567023 GRXCR1A8MXD5 290 aa16.49■□□□□ 0.23
COMMD4-216ENST00000567023 SLC27A2O14975 620 aa16.49■□□□□ 0.23
COMMD4-216ENST00000567023 PRC1O43663 620 aa16.49■□□□□ 0.23
COMMD4-216ENST00000567023 PPFIA4O75335 1185 aa16.49■□□□□ 0.23
COMMD4-216ENST00000567023 IQCF3P0C7M6 154 aa16.49■□□□□ 0.23
COMMD4-216ENST00000567023 HOXD8P13378 290 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-216ENST00000567023 KIF5BP33176 963 aa16.49■□□□□ 0.23
COMMD4-216ENST00000567023 RFC2P35250 354 aa16.49■□□□□ 0.23
COMMD4-216ENST00000567023 PBX2P40425 430 aa16.49■□□□□ 0.23
COMMD4-216ENST00000567023 LIFRP42702 1097 aa16.49■□□□□ 0.23
COMMD4-216ENST00000567023 MYSM1Q5VVJ2 828 aa16.49■□□□□ 0.23
COMMD4-216ENST00000567023 CASC1Q6TDU7 716 aa16.49■□□□□ 0.23
COMMD4-216ENST00000567023 CENPQQ7L2Z9 268 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-216ENST00000567023 CTCFLQ8NI51 663 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-216ENST00000567023 LZTS2Q9BRK4 669 aa16.49■□□□□ 0.23
COMMD4-216ENST00000567023 FRMPD4Q14CM0 1322 aa16.48■□□□□ 0.23
COMMD4-216ENST00000567023 DLL1O00548 723 aa16.48■□□□□ 0.23
COMMD4-216ENST00000567023 SH2B2O14492 632 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-216ENST00000567023 F2P00734 622 aa16.48■□□□□ 0.23
COMMD4-216ENST00000567023 MYCLP12524 364 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-216ENST00000567023 FOSL2P15408 326 aa16.48■□□□□ 0.23
COMMD4-216ENST00000567023 GNAQP50148 359 aa16.48■□□□□ 0.23
COMMD4-216ENST00000567023 BFSP2Q13515 415 aa16.48■□□□□ 0.23
COMMD4-216ENST00000567023 RAB30Q15771 203 aa16.48■□□□□ 0.23
COMMD4-216ENST00000567023 CELF3Q5SZQ8 465 aaKnown RBP16.48■□□□□ 0.23
COMMD4-216ENST00000567023 CREB3L3Q68CJ9 461 aa16.48■□□□□ 0.23
COMMD4-216ENST00000567023 DHX37Q8IY37 1157 aaKnown RBP16.48■□□□□ 0.23
COMMD4-216ENST00000567023 MAFAQ8NHW3 353 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-216ENST00000567023 IL31RAQ8NI17 732 aa16.48■□□□□ 0.23
COMMD4-216ENST00000567023 CTAGE1Q96RT6 745 aa16.48■□□□□ 0.23
COMMD4-216ENST00000567023 KATNAL1Q9BW62 490 aa16.48■□□□□ 0.23
COMMD4-216ENST00000567023 HAS3O00219 553 aa16.47■□□□□ 0.23
COMMD4-216ENST00000567023 STAM2O75886 525 aa16.47■□□□□ 0.23
COMMD4-216ENST00000567023 CCND2P30279 289 aa16.47■□□□□ 0.23
COMMD4-216ENST00000567023 COL9A3Q14050 684 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-216ENST00000567023 PTGISQ16647 500 aa16.47■□□□□ 0.23
COMMD4-216ENST00000567023 GDF6Q6KF10 455 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-216ENST00000567023 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.47■□□□□ 0.23
COMMD4-216ENST00000567023 RETREG2Q8NC44 543 aa16.47■□□□□ 0.23
COMMD4-216ENST00000567023 CAGE1Q8TC20 777 aa16.47■□□□□ 0.23
COMMD4-216ENST00000567023 PPP1R13LQ8WUF5 828 aa16.47■□□□□ 0.23
COMMD4-216ENST00000567023 RRP36Q96EU6 259 aaKnown RBP16.47■□□□□ 0.23
COMMD4-216ENST00000567023 GTF2IRD1Q9UHL9 959 aa16.47■□□□□ 0.23
COMMD4-216ENST00000567023 MSRAQ9UJ68 235 aa16.47■□□□□ 0.23
COMMD4-216ENST00000567023 SLC4A7Q9Y6M7 1214 aa16.47■□□□□ 0.23
COMMD4-216ENST00000567023 PIK3CDO00329 1044 aa16.46■□□□□ 0.23
COMMD4-216ENST00000567023 CALM1P0DP23 149 aa16.46■□□□□ 0.23
COMMD4-216ENST00000567023 CALM2P0DP24 149 aa16.46■□□□□ 0.23
COMMD4-216ENST00000567023 CALM3P0DP25 149 aa16.46■□□□□ 0.23
COMMD4-216ENST00000567023 ICAM3P32942 547 aa16.46■□□□□ 0.23
COMMD4-216ENST00000567023 MRPS9P82933 396 aaKnown RBP16.46■□□□□ 0.23
COMMD4-216ENST00000567023 SP2Q02086 613 aa16.46■□□□□ 0.23
COMMD4-216ENST00000567023 RBL2Q08999 1139 aa16.46■□□□□ 0.23
COMMD4-216ENST00000567023 HSDL1Q3SXM5 330 aa16.46■□□□□ 0.23
COMMD4-216ENST00000567023 FCHSD1Q86WN1 690 aa16.46■□□□□ 0.23
COMMD4-216ENST00000567023 AFAP1L1Q8TED9 768 aa16.46■□□□□ 0.23
COMMD4-216ENST00000567023 MYL10Q9BUA6 226 aa16.46■□□□□ 0.23
COMMD4-216ENST00000567023 ANO2Q9NQ90 1003 aa16.46■□□□□ 0.23
COMMD4-216ENST00000567023 NOD1Q9Y239 953 aa16.46■□□□□ 0.23
COMMD4-216ENST00000567023 SPTBN5Q9NRC6 3674 aaKnown RBP16.46■□□□□ 0.22
COMMD4-216ENST00000567023 MYH7BA7E2Y1 1941 aa16.45■□□□□ 0.22
COMMD4-216ENST00000567023 CCDC69A6NI79 296 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms