RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 MAP3K20Q9NYL2 800 aaKnown RBP17.65■□□□□ 0.42
SMPD3-208ENST00000566723 EIF3JO75822 258 aaKnown RBP17.64■□□□□ 0.41
SMPD3-208ENST00000566723 PFKMP08237 780 aa17.64■□□□□ 0.41
SMPD3-208ENST00000566723 TROAPQ12815 778 aa17.64■□□□□ 0.41
SMPD3-208ENST00000566723 TRAF1Q13077 416 aa17.64■□□□□ 0.41
SMPD3-208ENST00000566723 RAB30Q15771 203 aa17.64■□□□□ 0.41
SMPD3-208ENST00000566723 HOMER1Q86YM7 354 aa17.64■□□□□ 0.41
SMPD3-208ENST00000566723 MB21D2Q8IYB1 491 aaPredicted RBP17.64■□□□□ 0.41
SMPD3-208ENST00000566723 SAMD3Q8N6K7 520 aa17.64■□□□□ 0.41
SMPD3-208ENST00000566723 PPP1R13LQ8WUF5 828 aa17.64■□□□□ 0.41
SMPD3-208ENST00000566723 MAP4K1Q92918 833 aa17.64■□□□□ 0.41
SMPD3-208ENST00000566723 RBM8AQ9Y5S9 174 aaKnown RBP17.64■□□□□ 0.41
SMPD3-208ENST00000566723 DOCK5Q9H7D0 1870 aa17.63■□□□□ 0.41
SMPD3-208ENST00000566723 CYTH3O43739 400 aa17.63■□□□□ 0.41
SMPD3-208ENST00000566723 ANTXR2P58335 489 aa17.63■□□□□ 0.41
SMPD3-208ENST00000566723 TMEM67Q5HYA8 995 aa17.63■□□□□ 0.41
SMPD3-208ENST00000566723 CHST3Q7LGC8 479 aa17.63■□□□□ 0.41
SMPD3-208ENST00000566723 CATIPQ7Z7H3 387 aa17.63■□□□□ 0.41
SMPD3-208ENST00000566723 EMID1Q96A84 441 aaPredicted RBP17.63■□□□□ 0.41
SMPD3-208ENST00000566723 VWCEQ96DN2 955 aa17.63■□□□□ 0.41
SMPD3-208ENST00000566723 PIGSQ96S52 555 aa17.63■□□□□ 0.41
SMPD3-208ENST00000566723 PDCD2LQ9BRP1 358 aa17.63■□□□□ 0.41
SMPD3-208ENST00000566723 DDX41Q9UJV9 622 aaKnown RBP17.63■□□□□ 0.41
SMPD3-208ENST00000566723 MRVI1Q9Y6F6 885 aa17.63■□□□□ 0.41
SMPD3-208ENST00000566723 PITPNM1O00562 1244 aa17.62■□□□□ 0.41
SMPD3-208ENST00000566723 HOXA13P31271 388 aaPredicted RBP17.62■□□□□ 0.41
SMPD3-208ENST00000566723 SESTD1Q86VW0 696 aa17.62■□□□□ 0.41
SMPD3-208ENST00000566723 MSRAQ9UJ68 235 aa17.62■□□□□ 0.41
SMPD3-208ENST00000566723 PTPRSQ13332 1948 aa17.61■□□□□ 0.41
SMPD3-208ENST00000566723 PNMA6FA0A0J9YX94 578 aa17.61■□□□□ 0.41
SMPD3-208ENST00000566723 CASTP20810 708 aaKnown RBP17.61■□□□□ 0.41
SMPD3-208ENST00000566723 RFC2P35250 354 aa17.61■□□□□ 0.41
SMPD3-208ENST00000566723 CHMP4BP1P59074 171 aa17.61■□□□□ 0.41
SMPD3-208ENST00000566723 BFSP2Q13515 415 aa17.61■□□□□ 0.41
SMPD3-208ENST00000566723 PGM5Q15124 567 aa17.61■□□□□ 0.41
SMPD3-208ENST00000566723 DGKDQ16760 1214 aa17.61■□□□□ 0.41
SMPD3-208ENST00000566723 IL31RAQ8NI17 732 aa17.61■□□□□ 0.41
SMPD3-208ENST00000566723 PPTC7Q8NI37 304 aa17.61■□□□□ 0.41
SMPD3-208ENST00000566723 IGDCC4Q8TDY8 1250 aa17.61■□□□□ 0.41
SMPD3-208ENST00000566723 KAT2BQ92831 832 aa17.61■□□□□ 0.41
SMPD3-208ENST00000566723 NOD1Q9Y239 953 aa17.61■□□□□ 0.41
SMPD3-208ENST00000566723 SLC4A7Q9Y6M7 1214 aa17.61■□□□□ 0.41
SMPD3-208ENST00000566723 ZBBXA8MT70 800 aa17.6■□□□□ 0.41
SMPD3-208ENST00000566723 GCOM1H8Y6P7 765 aaPredicted RBP17.6■□□□□ 0.41
SMPD3-208ENST00000566723 RGS20O76081 388 aa17.6■□□□□ 0.41
SMPD3-208ENST00000566723 POLR2MP0CAP2 368 aa17.6■□□□□ 0.41
SMPD3-208ENST00000566723 MYCLP12524 364 aaPredicted RBP17.6■□□□□ 0.41
SMPD3-208ENST00000566723 LAMC2Q13753 1193 aa17.6■□□□□ 0.41
SMPD3-208ENST00000566723 PTGISQ16647 500 aa17.6■□□□□ 0.41
SMPD3-208ENST00000566723 KCNV1Q6PIU1 500 aa17.6■□□□□ 0.41
SMPD3-208ENST00000566723 DEFB128Q7Z7B8 93 aa17.6■□□□□ 0.41
SMPD3-208ENST00000566723 RETREG2Q8NC44 543 aa17.6■□□□□ 0.41
SMPD3-208ENST00000566723 KATNAL1Q9BW62 490 aa17.6■□□□□ 0.41
SMPD3-208ENST00000566723 NKX2-4Q9H2Z4 354 aa17.6■□□□□ 0.41
SMPD3-208ENST00000566723 LY9Q9HBG7 655 aa17.6■□□□□ 0.41
SMPD3-208ENST00000566723 DDAH1O94760 285 aa17.59■□□□□ 0.41
SMPD3-208ENST00000566723 F2P00734 622 aa17.59■□□□□ 0.41
SMPD3-208ENST00000566723 IQCF3P0C7M6 154 aa17.59■□□□□ 0.41
SMPD3-208ENST00000566723 CCND2P30279 289 aa17.59■□□□□ 0.41
SMPD3-208ENST00000566723 GDF6Q6KF10 455 aaPredicted RBP17.59■□□□□ 0.41
SMPD3-208ENST00000566723 CASC1Q6TDU7 716 aa17.59■□□□□ 0.41
SMPD3-208ENST00000566723 VSIG10LQ86VR7 867 aa17.59■□□□□ 0.41
SMPD3-208ENST00000566723 DHX37Q8IY37 1157 aaKnown RBP17.59■□□□□ 0.41
SMPD3-208ENST00000566723 ZNF654Q8IZM8 581 aa17.59■□□□□ 0.41
SMPD3-208ENST00000566723 CCDC155Q8N6L0 562 aa17.59■□□□□ 0.41
SMPD3-208ENST00000566723 CAGE1Q8TC20 777 aa17.59■□□□□ 0.41
SMPD3-208ENST00000566723 CTAGE1Q96RT6 745 aa17.59■□□□□ 0.41
SMPD3-208ENST00000566723 GAS2L1Q99501 681 aaPredicted RBP17.59■□□□□ 0.41
SMPD3-208ENST00000566723 MAP3K14Q99558 947 aa17.59■□□□□ 0.41
SMPD3-208ENST00000566723 MTA3Q9BTC8 594 aa17.59■□□□□ 0.41
SMPD3-208ENST00000566723 SPZ1Q9BXG8 430 aa17.59■□□□□ 0.41
SMPD3-208ENST00000566723 LSG1Q9H089 658 aaKnown RBP17.59■□□□□ 0.41
SMPD3-208ENST00000566723 YBX2Q9Y2T7 364 aaKnown RBP17.59■□□□□ 0.41
SMPD3-208ENST00000566723 FRMPD4Q14CM0 1322 aa17.58■□□□□ 0.4
SMPD3-208ENST00000566723 ZNF286BP0CG31 522 aa17.58■□□□□ 0.4
SMPD3-208ENST00000566723 ACTN1P12814 892 aa17.58■□□□□ 0.4
SMPD3-208ENST00000566723 HOXD8P13378 290 aaPredicted RBP17.58■□□□□ 0.4
SMPD3-208ENST00000566723 ATP2A2P16615 1042 aaKnown RBP17.58■□□□□ 0.4
SMPD3-208ENST00000566723 KIF5BP33176 963 aa17.58■□□□□ 0.4
SMPD3-208ENST00000566723 PSEN2P49810 448 aa17.58■□□□□ 0.4
SMPD3-208ENST00000566723 FCHSD1Q86WN1 690 aa17.58■□□□□ 0.4
SMPD3-208ENST00000566723 CTCFLQ8NI51 663 aaPredicted RBP17.58■□□□□ 0.4
SMPD3-208ENST00000566723 ESYT1Q9BSJ8 1104 aa17.58■□□□□ 0.4
SMPD3-208ENST00000566723 PRDM12Q9H4Q4 367 aa17.58■□□□□ 0.4
SMPD3-208ENST00000566723 SPTBN5Q9NRC6 3674 aaKnown RBP17.58■□□□□ 0.4
SMPD3-208ENST00000566723 PRC1O43663 620 aa17.57■□□□□ 0.4
SMPD3-208ENST00000566723 GGPS1O95749 300 aa17.57■□□□□ 0.4
SMPD3-208ENST00000566723 TGFB3P10600 412 aa17.57■□□□□ 0.4
SMPD3-208ENST00000566723 UBA1P22314 1058 aaKnown RBP17.57■□□□□ 0.4
SMPD3-208ENST00000566723 RABGGTBP53611 331 aa17.57■□□□□ 0.4
SMPD3-208ENST00000566723 MFSD10Q14728 455 aa17.57■□□□□ 0.4
SMPD3-208ENST00000566723 CELF3Q5SZQ8 465 aaKnown RBP17.57■□□□□ 0.4
SMPD3-208ENST00000566723 MYSM1Q5VVJ2 828 aa17.57■□□□□ 0.4
SMPD3-208ENST00000566723 AFAP1L1Q8TED9 768 aa17.57■□□□□ 0.4
SMPD3-208ENST00000566723 PIBF1Q8WXW3 757 aa17.57■□□□□ 0.4
SMPD3-208ENST00000566723 SPATA33Q96N06 139 aa17.57■□□□□ 0.4
SMPD3-208ENST00000566723 MYL10Q9BUA6 226 aa17.57■□□□□ 0.4
SMPD3-208ENST00000566723 COL25A1Q9BXS0 654 aaPredicted RBP17.57■□□□□ 0.4
SMPD3-208ENST00000566723 SLC28A3Q9HAS3 691 aa17.57■□□□□ 0.4
SMPD3-208ENST00000566723 GTF2IRD1Q9UHL9 959 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms