RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 PCDH10Q9P2E7 1040 aa14.6□□□□□ -0.07
LPCAT4-206ENST00000566581 DDX41Q9UJV9 622 aaKnown RBP14.6□□□□□ -0.07
LPCAT4-206ENST00000566581 DOCK5Q9H7D0 1870 aa14.6□□□□□ -0.07
LPCAT4-206ENST00000566581 SOX1O00570 391 aaPredicted RBP14.59□□□□□ -0.07
LPCAT4-206ENST00000566581 RGS20O76081 388 aa14.59□□□□□ -0.07
LPCAT4-206ENST00000566581 GH1P01241 217 aa14.59□□□□□ -0.07
LPCAT4-206ENST00000566581 TGFB3P10600 412 aa14.59□□□□□ -0.07
LPCAT4-206ENST00000566581 MICU3Q86XE3 530 aa14.59□□□□□ -0.07
LPCAT4-206ENST00000566581 PIBF1Q8WXW3 757 aa14.59□□□□□ -0.07
LPCAT4-206ENST00000566581 EMID1Q96A84 441 aaPredicted RBP14.59□□□□□ -0.07
LPCAT4-206ENST00000566581 MTG1Q9BT17 334 aaPredicted RBP14.59□□□□□ -0.07
LPCAT4-206ENST00000566581 BRPF3Q9ULD4 1205 aa14.59□□□□□ -0.07
LPCAT4-206ENST00000566581 SNX14Q9Y5W7 946 aa14.59□□□□□ -0.07
LPCAT4-206ENST00000566581 FRMPD4Q14CM0 1322 aa14.59□□□□□ -0.07
LPCAT4-206ENST00000566581 MEIS2O14770 477 aa14.58□□□□□ -0.08
LPCAT4-206ENST00000566581 ZBTB43O43298 467 aa14.58□□□□□ -0.08
LPCAT4-206ENST00000566581 STAM2O75886 525 aa14.58□□□□□ -0.08
LPCAT4-206ENST00000566581 CCND2P30279 289 aa14.58□□□□□ -0.08
LPCAT4-206ENST00000566581 ARHGAP1Q07960 439 aa14.58□□□□□ -0.08
LPCAT4-206ENST00000566581 LY6KQ17RY6 165 aa14.58□□□□□ -0.08
LPCAT4-206ENST00000566581 FCHSD1Q86WN1 690 aa14.58□□□□□ -0.08
LPCAT4-206ENST00000566581 TEX2Q8IWB9 1127 aa14.58□□□□□ -0.08
LPCAT4-206ENST00000566581 CMTR1Q8N1G2 835 aaKnown RBP14.58□□□□□ -0.08
LPCAT4-206ENST00000566581 TCEANC2Q96MN5 208 aa14.58□□□□□ -0.08
LPCAT4-206ENST00000566581 COL6A3P12111 3177 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 MYL3P08590 195 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 MYCLP12524 364 aaPredicted RBP14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 PSMA5P28066 241 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 PSMC6P62333 389 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 FPGSQ05932 587 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 FUT2Q10981 343 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 LAMC2Q13753 1193 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 SHHQ15465 462 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 RTN1Q16799 776 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 MFSD5Q6N075 450 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 XRRA1Q6P2D8 792 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 NFRKBQ6P4R8 1299 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 BLOC1S2Q6QNY1 142 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 RAB11FIP4Q86YS3 637 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 CCDC82Q8N4S0 544 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 IL31RAQ8NI17 732 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 AFG1LQ8WV93 481 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 CUL5Q93034 780 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 LRCH3Q96II8 777 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 JAKMIP1Q96N16 626 aaKnown RBP14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 AGXT2Q9BYV1 514 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 ALDH8A1Q9H2A2 487 aaPredicted RBP14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 PSTPIP2Q9H939 334 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 MRVI1Q9Y6F6 885 aa14.57□□□□□ -0.08
LPCAT4-206ENST00000566581 KLF18A0A0U1RQI7 1052 aa14.56□□□□□ -0.08
LPCAT4-206ENST00000566581 MMP3P08254 477 aa14.56□□□□□ -0.08
LPCAT4-206ENST00000566581 SUPT20HL2P0C7V6 817 aa14.56□□□□□ -0.08
LPCAT4-206ENST00000566581 PTPN11Q06124 597 aaPredicted RBP14.56□□□□□ -0.08
LPCAT4-206ENST00000566581 DGKDQ16760 1214 aa14.56□□□□□ -0.08
LPCAT4-206ENST00000566581 USP17L6PQ6QN14 398 aa14.56□□□□□ -0.08
LPCAT4-206ENST00000566581 PPTC7Q8NI37 304 aa14.56□□□□□ -0.08
LPCAT4-206ENST00000566581 SMARCC2Q8TAQ2 1214 aa14.56□□□□□ -0.08
LPCAT4-206ENST00000566581 INPP4AQ96PE3 977 aaPredicted RBP14.56□□□□□ -0.08
LPCAT4-206ENST00000566581 USP26Q9BXU7 913 aa14.56□□□□□ -0.08
LPCAT4-206ENST00000566581 FAM217BQ9NTX9 383 aaPredicted RBP14.56□□□□□ -0.08
LPCAT4-206ENST00000566581 TET1Q8NFU7 2136 aa14.56□□□□□ -0.08
LPCAT4-206ENST00000566581 CCDC196A0A1B0GTZ2 297 aa14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 B4GALT4O60513 344 aa14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 HOXD8P13378 290 aaPredicted RBP14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 CASTP20810 708 aaKnown RBP14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 RPS6KB1P23443 525 aa14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 ICAM3P32942 547 aa14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 MRPS9P82933 396 aaKnown RBP14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 FGD1P98174 961 aa14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 NBPF20Q3BBV1 942 aa14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 C9orf50Q5SZB4 431 aa14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 CELF3Q5SZQ8 465 aaKnown RBP14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 MYSM1Q5VVJ2 828 aa14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 PCNX4Q63HM2 1172 aa14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 DHX37Q8IY37 1157 aaKnown RBP14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 TMEM199Q8N511 208 aa14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 TRPV6Q9H1D0 765 aa14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 CNTNAP5Q8WYK1 1306 aa14.55□□□□□ -0.08
LPCAT4-206ENST00000566581 SCN5AQ14524 2016 aa14.54□□□□□ -0.08
LPCAT4-206ENST00000566581 hCG_1642624A0A1W2PR95 340 aa14.54□□□□□ -0.08
LPCAT4-206ENST00000566581 GOLGA8AA7E2F4 631 aa14.54□□□□□ -0.08
LPCAT4-206ENST00000566581 GOLGA8BA8MQT2 603 aa14.54□□□□□ -0.08
LPCAT4-206ENST00000566581 hCG_1984214I3L0E3 225 aa14.54□□□□□ -0.08
LPCAT4-206ENST00000566581 PPFIA4O75335 1185 aa14.54□□□□□ -0.08
LPCAT4-206ENST00000566581 CPA1P15085 419 aa14.54□□□□□ -0.08
LPCAT4-206ENST00000566581 EPHB4P54760 987 aa14.54□□□□□ -0.08
LPCAT4-206ENST00000566581 EVCP57679 992 aa14.54□□□□□ -0.08
LPCAT4-206ENST00000566581 SP2Q02086 613 aa14.54□□□□□ -0.08
LPCAT4-206ENST00000566581 PPIGQ13427 754 aaKnown RBP eCLIP14.54□□□□□ -0.083e-7■■■□□ 17.1
LPCAT4-206ENST00000566581 GNPTABQ3T906 1256 aa14.54□□□□□ -0.08
LPCAT4-206ENST00000566581 Q6ZUG5 572 aa14.54□□□□□ -0.08
LPCAT4-206ENST00000566581 ZNF713Q8N859 430 aaPredicted RBP14.54□□□□□ -0.08
LPCAT4-206ENST00000566581 HIPK3Q9H422 1215 aa14.54□□□□□ -0.08
LPCAT4-206ENST00000566581 V9GY48 417 aaPredicted RBP14.54□□□□□ -0.08
LPCAT4-206ENST00000566581 NID2Q14112 1375 aa14.53□□□□□ -0.08
LPCAT4-206ENST00000566581 SPATA31C2B4DYI2 1134 aa14.53□□□□□ -0.08
LPCAT4-206ENST00000566581 CDC27P30260 824 aa14.53□□□□□ -0.08
LPCAT4-206ENST00000566581 APOBRQ0VD83 1088 aa14.53□□□□□ -0.08
LPCAT4-206ENST00000566581 HEATR3Q7Z4Q2 680 aa14.53□□□□□ -0.08
LPCAT4-206ENST00000566581 SESTD1Q86VW0 696 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms