RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 FAM47CQ5HY64 1035 aa23.03■■□□□ 1.28
CLN6-206ENST00000565471 TMTC2Q8N394 836 aa23.03■■□□□ 1.28
CLN6-206ENST00000565471 CTCFLQ8NI51 663 aaPredicted RBP23.03■■□□□ 1.28
CLN6-206ENST00000565471 TMEM87BQ96K49 555 aa23.03■■□□□ 1.28
CLN6-206ENST00000565471 MRVI1Q9Y6F6 885 aa23.03■■□□□ 1.28
CLN6-206ENST00000565471 BAZ2BQ9UIF8 2168 aaKnown RBP23.03■■□□□ 1.28
CLN6-206ENST00000565471 SLC27A2O14975 620 aa23.02■■□□□ 1.28
CLN6-206ENST00000565471 FGBP02675 491 aa23.02■■□□□ 1.28
CLN6-206ENST00000565471 SMARCA1P28370 1054 aa23.02■■□□□ 1.28
CLN6-206ENST00000565471 KIF5BP33176 963 aa23.02■■□□□ 1.28
CLN6-206ENST00000565471 PGM5Q15124 567 aa23.02■■□□□ 1.28
CLN6-206ENST00000565471 NECTIN1Q15223 517 aa23.02■■□□□ 1.28
CLN6-206ENST00000565471 KCNV1Q6PIU1 500 aa23.02■■□□□ 1.28
CLN6-206ENST00000565471 VSIG10LQ86VR7 867 aa23.02■■□□□ 1.28
CLN6-206ENST00000565471 RPUSD2Q8IZ73 545 aaKnown RBP23.02■■□□□ 1.28
CLN6-206ENST00000565471 SPZ1Q9BXG8 430 aa23.02■■□□□ 1.28
CLN6-206ENST00000565471 SH2B2O14492 632 aaPredicted RBP23.01■■□□□ 1.27
CLN6-206ENST00000565471 CYP2C9P11712 490 aa23.01■■□□□ 1.27
CLN6-206ENST00000565471 CASTP20810 708 aaKnown RBP23.01■■□□□ 1.27
CLN6-206ENST00000565471 LAMC2Q13753 1193 aa23.01■■□□□ 1.27
CLN6-206ENST00000565471 CREB3L3Q68CJ9 461 aa23.01■■□□□ 1.27
CLN6-206ENST00000565471 LZTS2Q9BRK4 669 aa23.01■■□□□ 1.27
CLN6-206ENST00000565471 ANO2Q9NQ90 1003 aa23.01■■□□□ 1.27
CLN6-206ENST00000565471 RGS20O76081 388 aa23■■□□□ 1.27
CLN6-206ENST00000565471 PFKMP08237 780 aa23■■□□□ 1.27
CLN6-206ENST00000565471 MYCLP12524 364 aaPredicted RBP23■■□□□ 1.27
CLN6-206ENST00000565471 LIFRP42702 1097 aa23■■□□□ 1.27
CLN6-206ENST00000565471 DGKDQ16760 1214 aa23■■□□□ 1.27
CLN6-206ENST00000565471 SESTD1Q86VW0 696 aa23■■□□□ 1.27
CLN6-206ENST00000565471 TIFAQ96CG3 184 aa23■■□□□ 1.27
CLN6-206ENST00000565471 MYL10Q9BUA6 226 aa23■■□□□ 1.27
CLN6-206ENST00000565471 PITPNM1O00562 1244 aa22.99■■□□□ 1.27
CLN6-206ENST00000565471 GNAQP50148 359 aa22.99■■□□□ 1.27
CLN6-206ENST00000565471 IL31RAQ8NI17 732 aa22.99■■□□□ 1.27
CLN6-206ENST00000565471 PPTC7Q8NI37 304 aa22.99■■□□□ 1.27
CLN6-206ENST00000565471 KAT2BQ92831 832 aa22.99■■□□□ 1.27
CLN6-206ENST00000565471 RRP36Q96EU6 259 aaKnown RBP22.99■■□□□ 1.27
CLN6-206ENST00000565471 SCLYQ96I15 445 aa22.99■■□□□ 1.27
CLN6-206ENST00000565471 PBX4Q9BYU1 374 aa22.99■■□□□ 1.27
CLN6-206ENST00000565471 CXXC1Q9P0U4 656 aaPredicted RBP22.99■■□□□ 1.27
CLN6-206ENST00000565471 CCDC69A6NI79 296 aa22.98■■□□□ 1.27
CLN6-206ENST00000565471 CALM1P0DP23 149 aa22.98■■□□□ 1.27
CLN6-206ENST00000565471 CALM2P0DP24 149 aa22.98■■□□□ 1.27
CLN6-206ENST00000565471 CALM3P0DP25 149 aa22.98■■□□□ 1.27
CLN6-206ENST00000565471 TGFB3P10600 412 aa22.98■■□□□ 1.27
CLN6-206ENST00000565471 CCND2P30279 289 aa22.98■■□□□ 1.27
CLN6-206ENST00000565471 NFXL1Q6ZNB6 911 aa22.98■■□□□ 1.27
CLN6-206ENST00000565471 FCHSD1Q86WN1 690 aa22.98■■□□□ 1.27
CLN6-206ENST00000565471 DHX37Q8IY37 1157 aaKnown RBP22.98■■□□□ 1.27
CLN6-206ENST00000565471 MYLIPQ8WY64 445 aa22.98■■□□□ 1.27
CLN6-206ENST00000565471 VWCEQ96DN2 955 aa22.98■■□□□ 1.27
CLN6-206ENST00000565471 FRMPD4Q14CM0 1322 aa22.98■■□□□ 1.27
CLN6-206ENST00000565471 HOXD8P13378 290 aaPredicted RBP22.97■■□□□ 1.27
CLN6-206ENST00000565471 RFC2P35250 354 aa22.97■■□□□ 1.27
CLN6-206ENST00000565471 BFSP2Q13515 415 aa22.97■■□□□ 1.27
CLN6-206ENST00000565471 RAB30Q15771 203 aa22.97■■□□□ 1.27
CLN6-206ENST00000565471 RNF20Q5VTR2 975 aa22.97■■□□□ 1.27
CLN6-206ENST00000565471 OTOP2Q7RTS6 562 aa22.97■■□□□ 1.27
CLN6-206ENST00000565471 PPP1R13LQ8WUF5 828 aa22.97■■□□□ 1.27
CLN6-206ENST00000565471 KATNAL1Q9BW62 490 aa22.97■■□□□ 1.27
CLN6-206ENST00000565471 ZNF576Q9H609 170 aa22.97■■□□□ 1.27
CLN6-206ENST00000565471 NOD1Q9Y239 953 aa22.97■■□□□ 1.27
CLN6-206ENST00000565471 TANC1Q9C0D5 1861 aa22.96■■□□□ 1.27
CLN6-206ENST00000565471 GRXCR1A8MXD5 290 aa22.96■■□□□ 1.27
CLN6-206ENST00000565471 STAM2O75886 525 aa22.96■■□□□ 1.27
CLN6-206ENST00000565471 COL9A3Q14050 684 aaPredicted RBP22.96■■□□□ 1.27
CLN6-206ENST00000565471 PTGISQ16647 500 aa22.96■■□□□ 1.27
CLN6-206ENST00000565471 CELF3Q5SZQ8 465 aaKnown RBP22.96■■□□□ 1.27
CLN6-206ENST00000565471 MYSM1Q5VVJ2 828 aa22.96■■□□□ 1.27
CLN6-206ENST00000565471 SKAP1Q86WV1 359 aa22.96■■□□□ 1.27
CLN6-206ENST00000565471 RETREG2Q8NC44 543 aa22.96■■□□□ 1.27
CLN6-206ENST00000565471 PIBF1Q8WXW3 757 aa22.96■■□□□ 1.27
CLN6-206ENST00000565471 SEC63Q9UGP8 760 aaKnown RBP22.96■■□□□ 1.27
CLN6-206ENST00000565471 MYH7BA7E2Y1 1941 aa22.95■■□□□ 1.26
CLN6-206ENST00000565471 PPFIA4O75335 1185 aa22.95■■□□□ 1.26
CLN6-206ENST00000565471 F2P00734 622 aa22.95■■□□□ 1.26
CLN6-206ENST00000565471 PBX2P40425 430 aa22.95■■□□□ 1.26
CLN6-206ENST00000565471 CHMP4BP1P59074 171 aa22.95■■□□□ 1.26
CLN6-206ENST00000565471 GRIN2CQ14957 1233 aa22.95■■□□□ 1.26
CLN6-206ENST00000565471 SGMS1Q86VZ5 419 aa22.95■■□□□ 1.26
CLN6-206ENST00000565471 CCDC155Q8N6L0 562 aa22.95■■□□□ 1.26
CLN6-206ENST00000565471 MAFAQ8NHW3 353 aaPredicted RBP22.95■■□□□ 1.26
CLN6-206ENST00000565471 MSRAQ9UJ68 235 aa22.95■■□□□ 1.26
CLN6-206ENST00000565471 SLC12A7Q9Y666 1083 aa22.95■■□□□ 1.26
CLN6-206ENST00000565471 HAS3O00219 553 aa22.94■■□□□ 1.26
CLN6-206ENST00000565471 PIK3CDO00329 1044 aa22.94■■□□□ 1.26
CLN6-206ENST00000565471 PLEKHA8P1O95397 391 aa22.94■■□□□ 1.26
CLN6-206ENST00000565471 GGPS1O95749 300 aa22.94■■□□□ 1.26
CLN6-206ENST00000565471 IQCF3P0C7M6 154 aa22.94■■□□□ 1.26
CLN6-206ENST00000565471 FOSL2P15408 326 aa22.94■■□□□ 1.26
CLN6-206ENST00000565471 UBA1P22314 1058 aaKnown RBP22.94■■□□□ 1.26
CLN6-206ENST00000565471 PSEN2P49810 448 aa22.94■■□□□ 1.26
CLN6-206ENST00000565471 GNPTABQ3T906 1256 aa22.94■■□□□ 1.26
CLN6-206ENST00000565471 GDF6Q6KF10 455 aaPredicted RBP22.94■■□□□ 1.26
CLN6-206ENST00000565471 SRBD1Q8N5C6 995 aaKnown RBP22.94■■□□□ 1.26
CLN6-206ENST00000565471 CAGE1Q8TC20 777 aa22.94■■□□□ 1.26
CLN6-206ENST00000565471 CUL5Q93034 780 aa22.94■■□□□ 1.26
CLN6-206ENST00000565471 SPATA33Q96N06 139 aa22.94■■□□□ 1.26
CLN6-206ENST00000565471 CTAGE1Q96RT6 745 aa22.94■■□□□ 1.26
CLN6-206ENST00000565471 GTF2IRD1Q9UHL9 959 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms