RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 MYADML2A6NDP7 307 aa29.73■■■□□ 2.35
NME3-208ENST00000565379 POTEB2H3BUK9 544 aa29.73■■■□□ 2.35
NME3-208ENST00000565379 CFBP00751 764 aa29.73■■■□□ 2.35
NME3-208ENST00000565379 CALML3P27482 149 aa29.73■■■□□ 2.35
NME3-208ENST00000565379 RPS6P62753 249 aaKnown RBP29.73■■■□□ 2.35
NME3-208ENST00000565379 BAATQ14032 418 aaPredicted RBP29.73■■■□□ 2.35
NME3-208ENST00000565379 TRIM29Q14134 588 aa29.73■■■□□ 2.35
NME3-208ENST00000565379 SLC39A5Q6ZMH5 540 aa29.73■■■□□ 2.35
NME3-208ENST00000565379 MSL3Q8N5Y2 521 aaKnown RBP29.73■■■□□ 2.35
NME3-208ENST00000565379 KATNBL1Q9H079 304 aa29.73■■■□□ 2.35
NME3-208ENST00000565379 VPS54Q9P1Q0 977 aa29.73■■■□□ 2.35
NME3-208ENST00000565379 LOC102724159A0A0B4J2E5 919 aa29.72■■■□□ 2.35
NME3-208ENST00000565379 ADAMTS4O75173 837 aa29.72■■■□□ 2.35
NME3-208ENST00000565379 PTGS1P23219 599 aa29.72■■■□□ 2.35
NME3-208ENST00000565379 MDM2Q00987 491 aaPredicted RBP29.72■■■□□ 2.35
NME3-208ENST00000565379 ACVR2BQ13705 512 aa29.72■■■□□ 2.35
NME3-208ENST00000565379 PWP2Q15269 919 aaKnown RBP29.72■■■□□ 2.35
NME3-208ENST00000565379 TRIM60Q495X7 471 aa29.72■■■□□ 2.35
NME3-208ENST00000565379 TYW1BQ6NUM6 668 aa29.72■■■□□ 2.35
NME3-208ENST00000565379 ADD3Q9UEY8 706 aaKnown RBP29.72■■■□□ 2.35
NME3-208ENST00000565379 SYNRGQ9UMZ2 1314 aa29.71■■■□□ 2.35
NME3-208ENST00000565379 NLRP5P59047 1200 aa29.71■■■□□ 2.35
NME3-208ENST00000565379 DNERQ8NFT8 737 aa29.71■■■□□ 2.35
NME3-208ENST00000565379 PHF24Q9UPV7 400 aa29.71■■■□□ 2.35
NME3-208ENST00000565379 B4DLN1 442 aa29.7■■■□□ 2.35
NME3-208ENST00000565379 HSP90AA1P07900 732 aaKnown RBP29.7■■■□□ 2.35
NME3-208ENST00000565379 SLC30A10Q6XR72 485 aa29.7■■■□□ 2.35
NME3-208ENST00000565379 SYTL5Q8TDW5 730 aaPredicted RBP29.7■■■□□ 2.35
NME3-208ENST00000565379 AIFM3Q96NN9 605 aa29.7■■■□□ 2.35
NME3-208ENST00000565379 MPHOSPH6Q99547 160 aaKnown RBP29.7■■■□□ 2.35
NME3-208ENST00000565379 FAM184BQ9ULE4 1060 aa29.7■■■□□ 2.35
NME3-208ENST00000565379 MEIS2O14770 477 aa29.69■■■□□ 2.34
NME3-208ENST00000565379 FOSP01100 380 aaPredicted RBP29.69■■■□□ 2.34
NME3-208ENST00000565379 CCDC144BQ3MJ40 725 aa29.69■■■□□ 2.34
NME3-208ENST00000565379 TBC1D5Q92609 795 aa29.69■■■□□ 2.34
NME3-208ENST00000565379 LRRC37A2A6NM11 1700 aa29.68■■■□□ 2.34
NME3-208ENST00000565379 GJB2P29033 226 aa29.68■■■□□ 2.34
NME3-208ENST00000565379 SNX17Q15036 470 aa29.68■■■□□ 2.34
NME3-208ENST00000565379 DAGLBQ8NCG7 672 aa29.68■■■□□ 2.34
NME3-208ENST00000565379 C8orf76Q96K31 380 aa29.68■■■□□ 2.34
NME3-208ENST00000565379 PHF20Q9BVI0 1012 aa29.68■■■□□ 2.34
NME3-208ENST00000565379 LAMA2P24043 3122 aaKnown RBP29.68■■■□□ 2.34
NME3-208ENST00000565379 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.67■■■□□ 2.34
NME3-208ENST00000565379 ANP32AP39687 249 aaKnown RBP29.67■■■□□ 2.34
NME3-208ENST00000565379 AP3B2Q13367 1082 aa29.67■■■□□ 2.34
NME3-208ENST00000565379 SH3RF1Q7Z6J0 888 aa29.67■■■□□ 2.34
NME3-208ENST00000565379 RNF180Q86T96 592 aa29.67■■■□□ 2.34
NME3-208ENST00000565379 SLC17A8Q8NDX2 589 aa29.67■■■□□ 2.34
NME3-208ENST00000565379 EHMT1Q9H9B1 1298 aa29.67■■■□□ 2.34
NME3-208ENST00000565379 BRMS1Q9HCU9 246 aa29.67■■■□□ 2.34
NME3-208ENST00000565379 PCDHA4Q9UN74 947 aa29.67■■■□□ 2.34
NME3-208ENST00000565379 A0A1W2PQ45 241 aaPredicted RBP29.66■■■□□ 2.34
NME3-208ENST00000565379 A0A1W2PQY0 241 aa29.66■■■□□ 2.34
NME3-208ENST00000565379 ASB14A6NK59 587 aa29.66■■■□□ 2.34
NME3-208ENST00000565379 PDCP20941 246 aa29.66■■■□□ 2.34
NME3-208ENST00000565379 TMEM63BQ5T3F8 832 aa29.66■■■□□ 2.34
NME3-208ENST00000565379 REXO1Q8N1G1 1221 aaKnown RBP29.66■■■□□ 2.34
NME3-208ENST00000565379 DEFB123Q8N688 67 aa29.66■■■□□ 2.34
NME3-208ENST00000565379 KLHDC9Q8NEP7 349 aa29.66■■■□□ 2.34
NME3-208ENST00000565379 NSUN6Q8TEA1 469 aaKnown RBP29.66■■■□□ 2.34
NME3-208ENST00000565379 ABHD16BQ9H3Z7 469 aa29.66■■■□□ 2.34
NME3-208ENST00000565379 SPDYE3A6NKU9 549 aa29.65■■■□□ 2.34
NME3-208ENST00000565379 HOXA13P31271 388 aaPredicted RBP29.65■■■□□ 2.34
NME3-208ENST00000565379 CLK2P49760 499 aaKnown RBP29.65■■■□□ 2.34
NME3-208ENST00000565379 USP17L6PQ6QN14 398 aa29.65■■■□□ 2.34
NME3-208ENST00000565379 IWS1Q96ST2 819 aa29.65■■■□□ 2.34
NME3-208ENST00000565379 LTBP2Q14767 1821 aa29.65■■■□□ 2.34
NME3-208ENST00000565379 DUSP11O75319 330 aaKnown RBP29.64■■■□□ 2.34
NME3-208ENST00000565379 PDIA4P13667 645 aaKnown RBP29.64■■■□□ 2.34
NME3-208ENST00000565379 TLE2Q04725 743 aa29.64■■■□□ 2.34
NME3-208ENST00000565379 SAFBQ15424 915 aaKnown RBP eCLIP29.64■■■□□ 2.34
NME3-208ENST00000565379 CCSAPQ6IQ19 270 aaPredicted RBP29.64■■■□□ 2.34
NME3-208ENST00000565379 EEPD1Q7L9B9 569 aa29.64■■■□□ 2.34
NME3-208ENST00000565379 BLIDQ8IZY5 108 aa29.64■■■□□ 2.34
NME3-208ENST00000565379 FBXO18Q8NFZ0 1043 aa29.64■■■□□ 2.34
NME3-208ENST00000565379 RMDN3Q96TC7 470 aa29.64■■■□□ 2.34
NME3-208ENST00000565379 LBHD1Q9BQE6 289 aaPredicted RBP29.64■■■□□ 2.34
NME3-208ENST00000565379 PRDM5Q9NQX1 630 aaPredicted RBP29.64■■■□□ 2.34
NME3-208ENST00000565379 PDLIM7Q9NR12 457 aa29.64■■■□□ 2.34
NME3-208ENST00000565379 PDGFCQ9NRA1 345 aa29.64■■■□□ 2.34
NME3-208ENST00000565379 DTNBO60941 627 aa29.63■■■□□ 2.33
NME3-208ENST00000565379 ACLYP53396 1101 aa29.63■■■□□ 2.33
NME3-208ENST00000565379 KCNA10Q16322 511 aa29.63■■■□□ 2.33
NME3-208ENST00000565379 ARHGEF16Q5VV41 709 aa29.63■■■□□ 2.33
NME3-208ENST00000565379 KRT40Q6A162 431 aa29.63■■■□□ 2.33
NME3-208ENST00000565379 FCHSD1Q86WN1 690 aa29.63■■■□□ 2.33
NME3-208ENST00000565379 FBXO16Q8IX29 292 aaPredicted RBP29.63■■■□□ 2.33
NME3-208ENST00000565379 TAAR1Q96RJ0 339 aa29.63■■■□□ 2.33
NME3-208ENST00000565379 TRIM43BA6NCK2 446 aa29.62■■■□□ 2.33
NME3-208ENST00000565379 CTAGE5O15320 804 aa29.62■■■□□ 2.33
NME3-208ENST00000565379 MMP1P03956 469 aa29.62■■■□□ 2.33
NME3-208ENST00000565379 ALDH5A1P51649 535 aaPredicted RBP29.62■■■□□ 2.33
NME3-208ENST00000565379 UBE2SQ16763 222 aa29.62■■■□□ 2.33
NME3-208ENST00000565379 TRIM43Q96BQ3 446 aaPredicted RBP29.62■■■□□ 2.33
NME3-208ENST00000565379 PXMP2Q9NR77 195 aa29.62■■■□□ 2.33
NME3-208ENST00000565379 COL20A1Q9P218 1284 aa29.62■■■□□ 2.33
NME3-208ENST00000565379 KCNJ14Q9UNX9 436 aa29.62■■■□□ 2.33
NME3-208ENST00000565379 C6orf222P0C671 652 aaPredicted RBP29.61■■■□□ 2.33
NME3-208ENST00000565379 KRT2P35908 639 aa29.61■■■□□ 2.33
NME3-208ENST00000565379 LARP1BQ659C4 914 aaKnown RBP29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms