RNA–Protein interactions for RNA: ENST00000564948.1

CX3CL1-203, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 3 BASIC

Gene CX3CL1, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-203ENST00000564948 PBX4Q9BYU1 374 aa17.48■□□□□ 0.39
CX3CL1-203ENST00000564948 ZNF576Q9H609 170 aa17.48■□□□□ 0.39
CX3CL1-203ENST00000564948 MSRAQ9UJ68 235 aa17.48■□□□□ 0.39
CX3CL1-203ENST00000564948 DDX41Q9UJV9 622 aaKnown RBP17.48■□□□□ 0.39
CX3CL1-203ENST00000564948 GRXCR1A8MXD5 290 aa17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 CYTH3O43739 400 aa17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 DDAH1O94760 285 aa17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 MYCLP12524 364 aaPredicted RBP17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 HOXA13P31271 388 aaPredicted RBP17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 KIF5BP33176 963 aa17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 RFC2P35250 354 aa17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 CHMP4BP1P59074 171 aa17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 BFSP2Q13515 415 aa17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 LAMC2Q13753 1193 aa17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 DGKDQ16760 1214 aa17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 SLC35G1Q2M3R5 365 aa17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 RETREG2Q8NC44 543 aa17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 CTCFLQ8NI51 663 aaPredicted RBP17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 MAP3K14Q99558 947 aa17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 KATNAL1Q9BW62 490 aa17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 CXXC1Q9P0U4 656 aaPredicted RBP17.47■□□□□ 0.39
CX3CL1-203ENST00000564948 SCN10AQ9Y5Y9 1956 aa17.46■□□□□ 0.39
CX3CL1-203ENST00000564948 PITPNM1O00562 1244 aa17.46■□□□□ 0.39
CX3CL1-203ENST00000564948 PBX2P40425 430 aa17.46■□□□□ 0.39
CX3CL1-203ENST00000564948 GRIN2CQ14957 1233 aa17.46■□□□□ 0.39
CX3CL1-203ENST00000564948 PGM5Q15124 567 aa17.46■□□□□ 0.39
CX3CL1-203ENST00000564948 SESTD1Q86VW0 696 aa17.46■□□□□ 0.39
CX3CL1-203ENST00000564948 DHX37Q8IY37 1157 aaKnown RBP17.46■□□□□ 0.39
CX3CL1-203ENST00000564948 ZNF654Q8IZM8 581 aa17.46■□□□□ 0.39
CX3CL1-203ENST00000564948 TMTC2Q8N394 836 aa17.46■□□□□ 0.39
CX3CL1-203ENST00000564948 CCDC155Q8N6L0 562 aa17.46■□□□□ 0.39
CX3CL1-203ENST00000564948 TMEM87BQ96K49 555 aa17.46■□□□□ 0.39
CX3CL1-203ENST00000564948 ESYT1Q9BSJ8 1104 aa17.46■□□□□ 0.39
CX3CL1-203ENST00000564948 LSG1Q9H089 658 aaKnown RBP17.46■□□□□ 0.39
CX3CL1-203ENST00000564948 LY9Q9HBG7 655 aa17.46■□□□□ 0.39
CX3CL1-203ENST00000564948 SLC4A7Q9Y6M7 1214 aa17.46■□□□□ 0.39
CX3CL1-203ENST00000564948 MYH6P13533 1939 aa17.45■□□□□ 0.38
CX3CL1-203ENST00000564948 ZBBXA8MT70 800 aa17.45■□□□□ 0.38
CX3CL1-203ENST00000564948 PRC1O43663 620 aa17.45■□□□□ 0.38
CX3CL1-203ENST00000564948 ACTN1P12814 892 aa17.45■□□□□ 0.38
CX3CL1-203ENST00000564948 CCND2P30279 289 aa17.45■□□□□ 0.38
CX3CL1-203ENST00000564948 MCM5P33992 734 aa17.45■□□□□ 0.38
CX3CL1-203ENST00000564948 GNAQP50148 359 aa17.45■□□□□ 0.38
CX3CL1-203ENST00000564948 PTGISQ16647 500 aa17.45■□□□□ 0.38
CX3CL1-203ENST00000564948 NFXL1Q6ZNB6 911 aa17.45■□□□□ 0.38
CX3CL1-203ENST00000564948 VSIG10LQ86VR7 867 aa17.45■□□□□ 0.38
CX3CL1-203ENST00000564948 FCHSD1Q86WN1 690 aa17.45■□□□□ 0.38
CX3CL1-203ENST00000564948 PPTC7Q8NI37 304 aa17.45■□□□□ 0.38
CX3CL1-203ENST00000564948 PPP1R13LQ8WUF5 828 aa17.45■□□□□ 0.38
CX3CL1-203ENST00000564948 LZTS2Q9BRK4 669 aa17.45■□□□□ 0.38
CX3CL1-203ENST00000564948 SPZ1Q9BXG8 430 aa17.45■□□□□ 0.38
CX3CL1-203ENST00000564948 SEC63Q9UGP8 760 aaKnown RBP17.45■□□□□ 0.38
CX3CL1-203ENST00000564948 CCDC69A6NI79 296 aa17.44■□□□□ 0.38
CX3CL1-203ENST00000564948 SLC27A2O14975 620 aa17.44■□□□□ 0.38
CX3CL1-203ENST00000564948 TGFB3P10600 412 aa17.44■□□□□ 0.38
CX3CL1-203ENST00000564948 SMARCA1P28370 1054 aa17.44■□□□□ 0.38
CX3CL1-203ENST00000564948 CENPQQ7L2Z9 268 aaPredicted RBP17.44■□□□□ 0.38
CX3CL1-203ENST00000564948 DEFB128Q7Z7B8 93 aa17.44■□□□□ 0.38
CX3CL1-203ENST00000564948 CAGE1Q8TC20 777 aa17.44■□□□□ 0.38
CX3CL1-203ENST00000564948 PIBF1Q8WXW3 757 aa17.44■□□□□ 0.38
CX3CL1-203ENST00000564948 RRP36Q96EU6 259 aaKnown RBP17.44■□□□□ 0.38
CX3CL1-203ENST00000564948 ANO2Q9NQ90 1003 aa17.44■□□□□ 0.38
CX3CL1-203ENST00000564948 SH2B2O14492 632 aaPredicted RBP17.43■□□□□ 0.38
CX3CL1-203ENST00000564948 F2P00734 622 aa17.43■□□□□ 0.38
CX3CL1-203ENST00000564948 IQCF3P0C7M6 154 aa17.43■□□□□ 0.38
CX3CL1-203ENST00000564948 CALM1P0DP23 149 aa17.43■□□□□ 0.38
CX3CL1-203ENST00000564948 CALM2P0DP24 149 aa17.43■□□□□ 0.38
CX3CL1-203ENST00000564948 CALM3P0DP25 149 aa17.43■□□□□ 0.38
CX3CL1-203ENST00000564948 PSEN2P49810 448 aa17.43■□□□□ 0.38
CX3CL1-203ENST00000564948 GNPTABQ3T906 1256 aa17.43■□□□□ 0.38
CX3CL1-203ENST00000564948 BMP2KLQ5H9B9 411 aa17.43■□□□□ 0.38
CX3CL1-203ENST00000564948 C7orf31Q8N865 590 aa17.43■□□□□ 0.38
CX3CL1-203ENST00000564948 IL31RAQ8NI17 732 aa17.43■□□□□ 0.38
CX3CL1-203ENST00000564948 KAT2BQ92831 832 aa17.43■□□□□ 0.38
CX3CL1-203ENST00000564948 CUL5Q93034 780 aa17.43■□□□□ 0.38
CX3CL1-203ENST00000564948 SPATA33Q96N06 139 aa17.43■□□□□ 0.38
CX3CL1-203ENST00000564948 GAS2L1Q99501 681 aaPredicted RBP17.43■□□□□ 0.38
CX3CL1-203ENST00000564948 MYL10Q9BUA6 226 aa17.43■□□□□ 0.38
CX3CL1-203ENST00000564948 STAM2O75886 525 aa17.42■□□□□ 0.38
CX3CL1-203ENST00000564948 RGS20O76081 388 aa17.42■□□□□ 0.38
CX3CL1-203ENST00000564948 GGPS1O95749 300 aa17.42■□□□□ 0.38
CX3CL1-203ENST00000564948 MFSD10Q14728 455 aa17.42■□□□□ 0.38
CX3CL1-203ENST00000564948 CELF3Q5SZQ8 465 aaKnown RBP17.42■□□□□ 0.38
CX3CL1-203ENST00000564948 RNF20Q5VTR2 975 aa17.42■□□□□ 0.38
CX3CL1-203ENST00000564948 MYSM1Q5VVJ2 828 aa17.42■□□□□ 0.38
CX3CL1-203ENST00000564948 CREB3L3Q68CJ9 461 aa17.42■□□□□ 0.38
CX3CL1-203ENST00000564948 GDF6Q6KF10 455 aaPredicted RBP17.42■□□□□ 0.38
CX3CL1-203ENST00000564948 AFAP1L1Q8TED9 768 aa17.42■□□□□ 0.38
CX3CL1-203ENST00000564948 ALG1Q9BT22 464 aa17.42■□□□□ 0.38
CX3CL1-203ENST00000564948 NKX2-4Q9H2Z4 354 aa17.42■□□□□ 0.38
CX3CL1-203ENST00000564948 MLXIPQ9HAP2 919 aa17.42■□□□□ 0.38
CX3CL1-203ENST00000564948 SLC28A3Q9HAS3 691 aa17.42■□□□□ 0.38
CX3CL1-203ENST00000564948 GTF2IRD1Q9UHL9 959 aa17.42■□□□□ 0.38
CX3CL1-203ENST00000564948 KIAA1217Q5T5P2 1943 aa17.41■□□□□ 0.38
CX3CL1-203ENST00000564948 PPFIA4O75335 1185 aa17.41■□□□□ 0.38
CX3CL1-203ENST00000564948 ZNF286BP0CG31 522 aa17.41■□□□□ 0.38
CX3CL1-203ENST00000564948 HOXD8P13378 290 aaPredicted RBP17.41■□□□□ 0.38
CX3CL1-203ENST00000564948 ATP2A2P16615 1042 aaKnown RBP17.41■□□□□ 0.38
CX3CL1-203ENST00000564948 UBA1P22314 1058 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms