RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 CARFQ8N187 725 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 FRS2Q8WU20 508 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 ALG3Q92685 438 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 GMLQ99445 158 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 LNPKQ9C0E8 428 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 NKX2-4Q9H2Z4 354 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 CAPNS1P04632 268 aa4.96□□□□□ -1.62
CHD9-211ENST00000564600 CYBBP04839 570 aa4.96□□□□□ -1.62
CHD9-211ENST00000564600 PAMP19021 973 aa4.96□□□□□ -1.62
CHD9-211ENST00000564600 CORO7P57737 925 aa4.96□□□□□ -1.62
CHD9-211ENST00000564600 GNL2Q13823 731 aaKnown RBP4.96□□□□□ -1.62
CHD9-211ENST00000564600 TARBP2Q15633 366 aaKnown RBP4.96□□□□□ -1.62
CHD9-211ENST00000564600 ANKS3Q6ZW76 656 aa4.96□□□□□ -1.62
CHD9-211ENST00000564600 SPRED1Q7Z699 444 aa4.96□□□□□ -1.62
CHD9-211ENST00000564600 ZFPM1Q8IX07 1006 aa4.96□□□□□ -1.62
CHD9-211ENST00000564600 SLC43A3Q8NBI5 491 aa4.96□□□□□ -1.62
CHD9-211ENST00000564600 KREMEN2Q8NCW0 462 aa4.96□□□□□ -1.62
CHD9-211ENST00000564600 SMARCC2Q8TAQ2 1214 aa4.96□□□□□ -1.62
CHD9-211ENST00000564600 NPLOC4Q8TAT6 608 aa4.96□□□□□ -1.62
CHD9-211ENST00000564600 RBM15Q96T37 977 aaKnown RBP eCLIP4.96□□□□□ -1.62
CHD9-211ENST00000564600 CYP26B1Q9NR63 512 aa4.96□□□□□ -1.62
CHD9-211ENST00000564600 SPATA6Q9NWH7 488 aaPredicted RBP4.96□□□□□ -1.62
CHD9-211ENST00000564600 ST6GALNAC2Q9UJ37 374 aa4.96□□□□□ -1.62
CHD9-211ENST00000564600 FBXL7Q9UJT9 491 aa4.96□□□□□ -1.62
CHD9-211ENST00000564600 SIT1Q9Y3P8 196 aa4.96□□□□□ -1.62
CHD9-211ENST00000564600 SH3D21A4FU49 640 aa4.95□□□□□ -1.62
CHD9-211ENST00000564600 E9PSI1 815 aa4.95□□□□□ -1.62
CHD9-211ENST00000564600 KLF4O43474 513 aa4.95□□□□□ -1.62
CHD9-211ENST00000564600 ZNF20P17024 532 aa4.95□□□□□ -1.62
CHD9-211ENST00000564600 GJA9P57773 515 aa4.95□□□□□ -1.62
CHD9-211ENST00000564600 KRTAP1-1Q07627 177 aa4.95□□□□□ -1.62
CHD9-211ENST00000564600 FXNQ16595 210 aa4.95□□□□□ -1.62
CHD9-211ENST00000564600 SLC10A6Q3KNW5 377 aa4.95□□□□□ -1.62
CHD9-211ENST00000564600 STK32CQ86UX6 486 aa4.95□□□□□ -1.62
CHD9-211ENST00000564600 ZNF761Q86XN6 746 aaPredicted RBP4.95□□□□□ -1.62
CHD9-211ENST00000564600 LZTR1Q8N653 840 aa4.95□□□□□ -1.62
CHD9-211ENST00000564600 PLEKHO2Q8TD55 490 aa4.95□□□□□ -1.62
CHD9-211ENST00000564600 NOP56O00567 594 aaKnown RBP4.94□□□□□ -1.62
CHD9-211ENST00000564600 SLPIP03973 132 aa4.94□□□□□ -1.62
CHD9-211ENST00000564600 FUCA1P04066 466 aa4.94□□□□□ -1.62
CHD9-211ENST00000564600 NTRK1P04629 796 aa4.94□□□□□ -1.62
CHD9-211ENST00000564600 LCP1P13796 627 aa4.94□□□□□ -1.62
CHD9-211ENST00000564600 ECI1P42126 302 aa4.94□□□□□ -1.62
CHD9-211ENST00000564600 POMZP3Q6PJE2 187 aa4.94□□□□□ -1.62
CHD9-211ENST00000564600 LIMS2Q7Z4I7 341 aa4.94□□□□□ -1.62
CHD9-211ENST00000564600 Q8N1X5 172 aa4.94□□□□□ -1.62
CHD9-211ENST00000564600 ZBTB8AQ96BR9 441 aa4.94□□□□□ -1.62
CHD9-211ENST00000564600 DDX11Q96FC9 970 aa4.94□□□□□ -1.62
CHD9-211ENST00000564600 C1orf159Q96HA4 380 aa4.94□□□□□ -1.62
CHD9-211ENST00000564600 MMP19Q99542 508 aa4.94□□□□□ -1.62
CHD9-211ENST00000564600 SRRDQ9UH36 339 aa4.94□□□□□ -1.62
CHD9-211ENST00000564600 SNRPB2P08579 225 aaKnown RBP4.93□□□□□ -1.62
CHD9-211ENST00000564600 NCAM1P13591 858 aa4.93□□□□□ -1.62
CHD9-211ENST00000564600 C6P13671 934 aa4.93□□□□□ -1.62
CHD9-211ENST00000564600 FPR2P25090 351 aa4.93□□□□□ -1.62
CHD9-211ENST00000564600 CAP1Q01518 475 aa4.93□□□□□ -1.62
CHD9-211ENST00000564600 DDR2Q16832 855 aa4.93□□□□□ -1.62
CHD9-211ENST00000564600 TBC1D10BQ4KMP7 808 aaPredicted RBP4.93□□□□□ -1.62
CHD9-211ENST00000564600 TEX2Q8IWB9 1127 aa4.93□□□□□ -1.62
CHD9-211ENST00000564600 TMEM145Q8NBT3 493 aa4.93□□□□□ -1.62
CHD9-211ENST00000564600 BTG4Q9NY30 223 aa4.93□□□□□ -1.62
CHD9-211ENST00000564600 MARCH2Q9P0N8 246 aa4.93□□□□□ -1.62
CHD9-211ENST00000564600 LRP2BPQ9P2M1 347 aa4.93□□□□□ -1.62
CHD9-211ENST00000564600 A0A1W2PQU0 124 aa4.92□□□□□ -1.62
CHD9-211ENST00000564600 NPHS1O60500 1241 aa4.92□□□□□ -1.62
CHD9-211ENST00000564600 SCG5P05408 212 aa4.92□□□□□ -1.62
CHD9-211ENST00000564600 SARSP49591 514 aaKnown RBP4.92□□□□□ -1.62
CHD9-211ENST00000564600 HMGA2P52926 109 aa4.92□□□□□ -1.62
CHD9-211ENST00000564600 GFRA1P56159 465 aa4.92□□□□□ -1.62
CHD9-211ENST00000564600 PPP2R2AP63151 447 aa4.92□□□□□ -1.62
CHD9-211ENST00000564600 NAALADL2Q58DX5 795 aa4.92□□□□□ -1.62
CHD9-211ENST00000564600 CPZQ66K79 652 aa4.92□□□□□ -1.62
CHD9-211ENST00000564600 WWC2Q6AWC2 1192 aa4.92□□□□□ -1.62
CHD9-211ENST00000564600 B3GNT8Q7Z7M8 397 aa4.92□□□□□ -1.62
CHD9-211ENST00000564600 NLRP10Q86W26 655 aa4.92□□□□□ -1.62
CHD9-211ENST00000564600 CRACR2BQ8N4Y2 399 aaPredicted RBP4.92□□□□□ -1.62
CHD9-211ENST00000564600 SH3RF3Q8TEJ3 882 aaPredicted RBP4.92□□□□□ -1.62
CHD9-211ENST00000564600 USP33Q8TEY7 942 aa4.92□□□□□ -1.62
CHD9-211ENST00000564600 NAT2P11245 290 aa4.91□□□□□ -1.62
CHD9-211ENST00000564600 HOXC12P31275 282 aa4.91□□□□□ -1.62
CHD9-211ENST00000564600 EEPD1Q7L9B9 569 aa4.91□□□□□ -1.62
CHD9-211ENST00000564600 RCBTB1Q8NDN9 531 aa4.91□□□□□ -1.62
CHD9-211ENST00000564600 ADAMTS17Q8TE56 1095 aa4.91□□□□□ -1.62
CHD9-211ENST00000564600 SORCS2Q96PQ0 1159 aa4.91□□□□□ -1.62
CHD9-211ENST00000564600 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.91□□□□□ -1.62
CHD9-211ENST00000564600 TRBV23OR9-2A0A075B6M9 112 aa4.9□□□□□ -1.63
CHD9-211ENST00000564600 C22orf46C9J442 243 aa4.9□□□□□ -1.63
CHD9-211ENST00000564600 SGSM2O43147 1006 aa4.9□□□□□ -1.63
CHD9-211ENST00000564600 BCL6P41182 706 aa4.9□□□□□ -1.63
CHD9-211ENST00000564600 KCNJ6P48051 423 aa4.9□□□□□ -1.63
CHD9-211ENST00000564600 RAB33AQ14088 237 aa4.9□□□□□ -1.63
CHD9-211ENST00000564600 SLC35F1Q5T1Q4 408 aa4.9□□□□□ -1.63
CHD9-211ENST00000564600 PPIL6Q8IXY8 311 aa4.9□□□□□ -1.63
CHD9-211ENST00000564600 FAM26EQ8N5C1 309 aa4.9□□□□□ -1.63
CHD9-211ENST00000564600 NETO2Q8NC67 525 aa4.9□□□□□ -1.63
CHD9-211ENST00000564600 TSPAN17Q96FV3 270 aa4.9□□□□□ -1.63
CHD9-211ENST00000564600 MRIQ9BWK5 157 aa4.9□□□□□ -1.63
CHD9-211ENST00000564600 RNF38Q9H0F5 515 aa4.9□□□□□ -1.63
CHD9-211ENST00000564600 INVSQ9Y283 1065 aa4.9□□□□□ -1.63
CHD9-211ENST00000564600 DLX3O60479 287 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms