RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	TRIM63	Q969Q1	353 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	PREX2	Q70Z35	1606 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	RAD21	O60216	631 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	CLASP2	O75122	1294 aa	Known RBP	4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	VHL	P40337	213 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	VPS37D	Q86XT2	251 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	KRT2	P35908	639 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	ELF3	P78545	371 aa	Predicted RBP	4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	BZW1	Q7L1Q6	419 aa	Known RBP	4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	CNBD1	Q8NA66	436 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	VPS50	Q96JG6	964 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	PLGRKT	Q9HBL7	147 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	RIC8A	Q9NPQ8	531 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	MLH3	Q9UHC1	1453 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	STX17	P56962	302 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	MAGOH	P61326	146 aa	Known RBP	4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	BASP1	P80723	227 aa	Known RBP	4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	PFDN4	Q9NQP4	134 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	4.62	□□□□□ -1.67	4e-7	■■■□□ 16
MACF1-231	ENST00000564288	LCA5L	O95447	670 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	MED21	Q13503	144 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	BTNL9	Q6UXG8	535 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	CENPU	Q71F23	418 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	ATL2	Q8NHH9	583 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	GORASP1	Q9BQQ3	440 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	TIMMDC1	Q9NPL8	285 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	NFU1	Q9UMS0	254 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	MYO1F	O00160	1098 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	IFIT1	P09914	478 aa	Known RBP	4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	GNAT1	P11488	350 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	CABP5	Q9NP86	173 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	GPR108	Q9NPR9	543 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	SENP1	Q9P0U3	644 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	ATP11B	Q9Y2G3	1177 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	SH3GLB1	Q9Y371	365 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	KLF18	A0A0U1RQI7	1052 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	TUBA4A	P68366	448 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	DDX54	Q8TDD1	881 aa	Known RBP	4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	TSPAN18	Q96SJ8	248 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	TCP11X2	Q5H9J9	407 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	FAM173B	Q6P4H8	233 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	MTHFD1L	Q6UB35	978 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	RAPGEF5	Q92565	580 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	RPGR	Q92834	1020 aa	Known RBP	4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	THAP9	Q9H5L6	903 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	ATP5B	P06576	529 aa	Known RBP	4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	TTK	P33981	857 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	MSH2	P43246	934 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	PPID	Q08752	370 aa	Known RBP	4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	TDRD12	Q587J7	1177 aa	Known RBP	4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	THEMIS2	Q5TEJ8	643 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	IRGC	Q6NXR0	463 aa		4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	GTPBP6	O43824	516 aa	Predicted RBP	4.62	□□□□□ -1.67
MACF1-231	ENST00000564288	RBM12B	Q8IXT5	1001 aa	Known RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	RBM41	Q96IZ5	413 aa	Known RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	EHD2	Q9NZN4	543 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	SSX2IP	Q9Y2D8	614 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	CCDC194	A0A1B0GVG4	234 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	TRAPPC3	O43617	180 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	GFPT2	O94808	682 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	PLAA	Q9Y263	795 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	KPNA4	O00629	521 aa	Predicted RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	STMN1	P16949	149 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	REST	Q13127	1097 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	PDCL	Q13371	301 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288		A0A1B0GTH6	734 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	OSBPL1A	Q9BXW6	950 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	TMBIM4	Q9HC24	238 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	SERTAD1	Q9UHV2	236 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	STK10	O94804	968 aa	Known RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	KRT12	Q99456	494 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	SLC26A6	Q9BXS9	759 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	THAP12	O43422	761 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	LRRC63	Q05C16	580 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	SIX6OS1	Q8N1H7	587 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	ERMN	Q8TAM6	284 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	LRRC1	Q9BTT6	524 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	ANAPC5	Q9UJX4	755 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	BARX2	Q9UMQ3	279 aa	Predicted RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	RGL2	O15211	777 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	MT-ND3	P03897	115 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	AFAP1	Q8N556	730 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	USP44	Q9H0E7	712 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	IFT122	Q9HBG6	1241 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	ST7	Q9NRC1	585 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	GID8	Q9NWU2	228 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	DLC1	Q96QB1	1528 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	KCNJ18	B7U540	433 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288		O00370	1275 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	APOA1	P02647	267 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	RNASE9	P60153	205 aa	Known RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	KCNJ12	Q14500	433 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	PRR16	Q569H4	304 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	TCERG1L	Q5VWI1	586 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	RINL	Q6ZS11	566 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	MAK16	Q9BXY0	300 aa	Known RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	SNX12	Q9UMY4	172 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	IL15	P40933	162 aa	Predicted RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	RASSF5	Q8WWW0	418 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms