RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 CTAGE1Q96RT6 745 aa19.44■□□□□ 0.7
CCNF-203ENST00000564236 MAP3K14Q99558 947 aa19.44■□□□□ 0.7
CCNF-203ENST00000564236 PCDHA1Q9Y5I3 950 aa19.44■□□□□ 0.7
CCNF-203ENST00000564236 PRUNE2Q8WUY3 3088 aa19.43■□□□□ 0.7
CCNF-203ENST00000564236 ERICH2A1L162 156 aa19.43■□□□□ 0.7
CCNF-203ENST00000564236 RGS20O76081 388 aa19.43■□□□□ 0.7
CCNF-203ENST00000564236 EIF2AK2P19525 551 aaKnown RBP19.43■□□□□ 0.7
CCNF-203ENST00000564236 CASTP20810 708 aaKnown RBP19.43■□□□□ 0.7
CCNF-203ENST00000564236 ANTXR2P58335 489 aa19.43■□□□□ 0.7
CCNF-203ENST00000564236 SART3Q15020 963 aaKnown RBP19.43■□□□□ 0.7
CCNF-203ENST00000564236 KCNV1Q6PIU1 500 aa19.43■□□□□ 0.7
CCNF-203ENST00000564236 RALYLQ86SE5 291 aaKnown RBP19.43■□□□□ 0.7
CCNF-203ENST00000564236 VSIG10LQ86VR7 867 aa19.43■□□□□ 0.7
CCNF-203ENST00000564236 MB21D2Q8IYB1 491 aaPredicted RBP19.43■□□□□ 0.7
CCNF-203ENST00000564236 PPTC7Q8NI37 304 aa19.43■□□□□ 0.7
CCNF-203ENST00000564236 IGDCC4Q8TDY8 1250 aa19.43■□□□□ 0.7
CCNF-203ENST00000564236 COL25A1Q9BXS0 654 aaPredicted RBP19.43■□□□□ 0.7
CCNF-203ENST00000564236 SENP2Q9HC62 589 aa19.43■□□□□ 0.7
CCNF-203ENST00000564236 MSRAQ9UJ68 235 aa19.43■□□□□ 0.7
CCNF-203ENST00000564236 PNMA6FA0A0J9YX94 578 aa19.42■□□□□ 0.7
CCNF-203ENST00000564236 IQCF3P0C7M6 154 aa19.42■□□□□ 0.7
CCNF-203ENST00000564236 TGFB3P10600 412 aa19.42■□□□□ 0.7
CCNF-203ENST00000564236 BFSP2Q13515 415 aa19.42■□□□□ 0.7
CCNF-203ENST00000564236 LAMC2Q13753 1193 aa19.42■□□□□ 0.7
CCNF-203ENST00000564236 WTAPQ15007 396 aa19.42■□□□□ 0.7
CCNF-203ENST00000564236 DGKDQ16760 1214 aa19.42■□□□□ 0.7
CCNF-203ENST00000564236 FAM47CQ5HY64 1035 aa19.42■□□□□ 0.7
CCNF-203ENST00000564236 CAGE1Q8TC20 777 aa19.42■□□□□ 0.7
CCNF-203ENST00000564236 SLC4A7Q9Y6M7 1214 aa19.42■□□□□ 0.7
CCNF-203ENST00000564236 FRMPD4Q14CM0 1322 aa19.42■□□□□ 0.7
CCNF-203ENST00000564236 HAS3O00219 553 aa19.41■□□□□ 0.7
CCNF-203ENST00000564236 F2P00734 622 aa19.41■□□□□ 0.7
CCNF-203ENST00000564236 SMARCA1P28370 1054 aa19.41■□□□□ 0.7
CCNF-203ENST00000564236 PGM5Q15124 567 aa19.41■□□□□ 0.7
CCNF-203ENST00000564236 PIGSQ96S52 555 aa19.41■□□□□ 0.7
CCNF-203ENST00000564236 KATNAL1Q9BW62 490 aa19.41■□□□□ 0.7
CCNF-203ENST00000564236 YBX2Q9Y2T7 364 aaKnown RBP19.41■□□□□ 0.7
CCNF-203ENST00000564236 PCDHA11Q9Y5I1 949 aa19.41■□□□□ 0.7
CCNF-203ENST00000564236 MRVI1Q9Y6F6 885 aa19.41■□□□□ 0.7
CCNF-203ENST00000564236 MYSM1Q5VVJ2 828 aa19.4■□□□□ 0.7
CCNF-203ENST00000564236 PHOSPHO2Q8TCD6 241 aa19.4■□□□□ 0.7
CCNF-203ENST00000564236 AFAP1L1Q8TED9 768 aa19.4■□□□□ 0.7
CCNF-203ENST00000564236 GTF2IRD1Q9UHL9 959 aa19.4■□□□□ 0.7
CCNF-203ENST00000564236 RBM8AQ9Y5S9 174 aaKnown RBP19.4■□□□□ 0.7
CCNF-203ENST00000564236 GCOM1H8Y6P7 765 aaPredicted RBP19.39■□□□□ 0.69
CCNF-203ENST00000564236 PPFIA4O75335 1185 aa19.39■□□□□ 0.69
CCNF-203ENST00000564236 DDAH1O94760 285 aa19.39■□□□□ 0.69
CCNF-203ENST00000564236 PARNO95453 639 aaKnown RBP19.39■□□□□ 0.69
CCNF-203ENST00000564236 POLR2MP0CAP2 368 aa19.39■□□□□ 0.69
CCNF-203ENST00000564236 ATP2A2P16615 1042 aaKnown RBP19.39■□□□□ 0.69
CCNF-203ENST00000564236 PTGISQ16647 500 aa19.39■□□□□ 0.69
CCNF-203ENST00000564236 TMEM67Q5HYA8 995 aa19.39■□□□□ 0.69
CCNF-203ENST00000564236 GDF6Q6KF10 455 aaPredicted RBP19.39■□□□□ 0.69
CCNF-203ENST00000564236 CATIPQ7Z7H3 387 aa19.39■□□□□ 0.69
CCNF-203ENST00000564236 HOMER1Q86YM7 354 aa19.39■□□□□ 0.69
CCNF-203ENST00000564236 CCDC155Q8N6L0 562 aa19.39■□□□□ 0.69
CCNF-203ENST00000564236 RETREG2Q8NC44 543 aa19.39■□□□□ 0.69
CCNF-203ENST00000564236 GAS2L1Q99501 681 aaPredicted RBP19.39■□□□□ 0.69
CCNF-203ENST00000564236 SPZ1Q9BXG8 430 aa19.39■□□□□ 0.69
CCNF-203ENST00000564236 SLC28A3Q9HAS3 691 aa19.39■□□□□ 0.69
CCNF-203ENST00000564236 LY9Q9HBG7 655 aa19.39■□□□□ 0.69
CCNF-203ENST00000564236 KIAA1217Q5T5P2 1943 aa19.39■□□□□ 0.69
CCNF-203ENST00000564236 STAM2O75886 525 aa19.38■□□□□ 0.69
CCNF-203ENST00000564236 BAIAP3O94812 1187 aa19.38■□□□□ 0.69
CCNF-203ENST00000564236 ACTN1P12814 892 aa19.38■□□□□ 0.69
CCNF-203ENST00000564236 HOXA13P31271 388 aaPredicted RBP19.38■□□□□ 0.69
CCNF-203ENST00000564236 CELF3Q5SZQ8 465 aaKnown RBP19.38■□□□□ 0.69
CCNF-203ENST00000564236 DHX37Q8IY37 1157 aaKnown RBP19.38■□□□□ 0.69
CCNF-203ENST00000564236 IL31RAQ8NI17 732 aa19.38■□□□□ 0.69
CCNF-203ENST00000564236 SLC9A7Q96T83 725 aa19.38■□□□□ 0.69
CCNF-203ENST00000564236 TANC1Q9C0D5 1861 aa19.38■□□□□ 0.69
CCNF-203ENST00000564236 LSG1Q9H089 658 aaKnown RBP19.38■□□□□ 0.69
CCNF-203ENST00000564236 NKX2-4Q9H2Z4 354 aa19.38■□□□□ 0.69
CCNF-203ENST00000564236 PRDM12Q9H4Q4 367 aa19.38■□□□□ 0.69
CCNF-203ENST00000564236 CHD7Q9P2D1 2997 aa19.38■□□□□ 0.69
CCNF-203ENST00000564236 CCND2P30279 289 aa19.37■□□□□ 0.69
CCNF-203ENST00000564236 ICAM3P32942 547 aa19.37■□□□□ 0.69
CCNF-203ENST00000564236 IRX6P78412 446 aaPredicted RBP19.37■□□□□ 0.69
CCNF-203ENST00000564236 GPNMBQ14956 572 aa19.37■□□□□ 0.69
CCNF-203ENST00000564236 CHST3Q7LGC8 479 aa19.37■□□□□ 0.69
CCNF-203ENST00000564236 DEFB128Q7Z7B8 93 aa19.37■□□□□ 0.69
CCNF-203ENST00000564236 USP38Q8NB14 1042 aa19.37■□□□□ 0.69
CCNF-203ENST00000564236 PPP1R13LQ8WUF5 828 aa19.37■□□□□ 0.69
CCNF-203ENST00000564236 DHX38Q92620 1227 aaKnown RBP19.37■□□□□ 0.69
CCNF-203ENST00000564236 INPP4AQ96PE3 977 aaPredicted RBP19.37■□□□□ 0.69
CCNF-203ENST00000564236 NOD1Q9Y239 953 aa19.37■□□□□ 0.69
CCNF-203ENST00000564236 PIK3CDO00329 1044 aa19.36■□□□□ 0.69
CCNF-203ENST00000564236 CXCL10P02778 98 aa19.36■□□□□ 0.69
CCNF-203ENST00000564236 SELPP16109 830 aa19.36■□□□□ 0.69
CCNF-203ENST00000564236 UBA1P22314 1058 aaKnown RBP19.36■□□□□ 0.69
CCNF-203ENST00000564236 HOXC8P31273 242 aa19.36■□□□□ 0.69
CCNF-203ENST00000564236 PSEN2P49810 448 aa19.36■□□□□ 0.69
CCNF-203ENST00000564236 SP2Q02086 613 aa19.36■□□□□ 0.69
CCNF-203ENST00000564236 ADGRE1Q14246 886 aa19.36■□□□□ 0.69
CCNF-203ENST00000564236 MFSD10Q14728 455 aa19.36■□□□□ 0.69
CCNF-203ENST00000564236 HSDL1Q3SXM5 330 aa19.36■□□□□ 0.69
CCNF-203ENST00000564236 ZNF654Q8IZM8 581 aa19.36■□□□□ 0.69
CCNF-203ENST00000564236 TMTC2Q8N394 836 aa19.36■□□□□ 0.69
CCNF-203ENST00000564236 TMEM87BQ96K49 555 aa19.36■□□□□ 0.69
CCNF-203ENST00000564236 LZTS2Q9BRK4 669 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms