RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 TMEM67Q5HYA8 995 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 FAM47AQ5JRC9 791 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 CEP85LQ5SZL2 805 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 C9orf131Q5VYM1 1079 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 EMBQ6PCB8 327 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 KDM7AQ6ZMT4 941 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 MMGT1Q8N4V1 131 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 CPLX3Q8WVH0 158 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 UBAC1Q9BSL1 405 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 EPN3Q9H201 632 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 EHD4Q9H223 541 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 CD248Q9HCU0 757 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 ZNF70Q9UC06 446 aaPredicted RBP12.28□□□□□ -0.44
TCF4-222ENST00000564228 ANGEL1Q9UNK9 670 aaKnown RBP12.28□□□□□ -0.44
TCF4-222ENST00000564228 SAMM50Q9Y512 469 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 POLR2AP24928 1970 aaKnown RBP12.28□□□□□ -0.44
TCF4-222ENST00000564228 ERICH2A1L162 156 aa12.27□□□□□ -0.44
TCF4-222ENST00000564228 TSPY2A6NKD2 308 aa12.27□□□□□ -0.44
TCF4-222ENST00000564228 WNT10BO00744 389 aa12.27□□□□□ -0.44
TCF4-222ENST00000564228 SH2B2O14492 632 aaPredicted RBP12.27□□□□□ -0.44
TCF4-222ENST00000564228 ORC4O43929 436 aa12.27□□□□□ -0.44
TCF4-222ENST00000564228 EGFRP00533 1210 aa12.27□□□□□ -0.44
TCF4-222ENST00000564228 HLA-DOAP06340 250 aa12.27□□□□□ -0.44
TCF4-222ENST00000564228 MYBL2P10244 700 aa12.27□□□□□ -0.44
TCF4-222ENST00000564228 SPAG1Q07617 926 aa12.27□□□□□ -0.44
TCF4-222ENST00000564228 PPP2R5AQ15172 486 aa12.27□□□□□ -0.44
TCF4-222ENST00000564228 CCDC40Q4G0X9 1142 aa12.27□□□□□ -0.44
TCF4-222ENST00000564228 TBC1D10BQ4KMP7 808 aaPredicted RBP12.27□□□□□ -0.44
TCF4-222ENST00000564228 SAMD7Q7Z3H4 446 aa12.27□□□□□ -0.44
TCF4-222ENST00000564228 C1orf131Q8NDD1 294 aaKnown RBP12.27□□□□□ -0.44
TCF4-222ENST00000564228 CAVIN3Q969G5 261 aa12.27□□□□□ -0.44
TCF4-222ENST00000564228 FAM212AQ96EL1 285 aa12.27□□□□□ -0.44
TCF4-222ENST00000564228 TMEM87BQ96K49 555 aa12.27□□□□□ -0.44
TCF4-222ENST00000564228 LIMA1Q9UHB6 759 aaKnown RBP12.27□□□□□ -0.44
TCF4-222ENST00000564228 EPN1Q9Y6I3 576 aaPredicted RBP12.27□□□□□ -0.44
TCF4-222ENST00000564228 A0A1B0GUA9 196 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 ACTN4O43707 911 aaKnown RBP12.27□□□□□ -0.45
TCF4-222ENST00000564228 NDUFA10O95299 355 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 ABL1P00519 1130 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 PTPREP23469 700 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 CDK8P49336 464 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 EPHB4P54760 987 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 ZNF280AP59817 542 aaPredicted RBP12.27□□□□□ -0.45
TCF4-222ENST00000564228 NFXL1Q6ZNB6 911 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 C16orf86Q6ZW13 317 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 TAX1BP1Q86VP1 789 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 RAB11FIP4Q86YS3 637 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 GPC2Q8N158 579 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 MTMR14Q8NCE2 650 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 C3orf20Q8ND61 904 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 IGDCC4Q8TDY8 1250 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 SLF1Q9BQI6 1058 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 ZNF287Q9HBT7 754 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 SENP2Q9HC62 589 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 GJB4Q9NTQ9 266 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 SERTAD1Q9UHV2 236 aa12.27□□□□□ -0.45
TCF4-222ENST00000564228 TNKSO95271 1327 aa12.26□□□□□ -0.45
TCF4-222ENST00000564228 GOLGA6L7A0A1B0GV03 622 aa12.26□□□□□ -0.45
TCF4-222ENST00000564228 DDTLA6NHG4 134 aaPredicted RBP12.26□□□□□ -0.45
TCF4-222ENST00000564228 LRRC10BA6NIK2 292 aa12.26□□□□□ -0.45
TCF4-222ENST00000564228 NMT2O60551 498 aa12.26□□□□□ -0.45
TCF4-222ENST00000564228 DDNO94850 711 aaPredicted RBP12.26□□□□□ -0.45
TCF4-222ENST00000564228 ATP1A1P05023 1023 aaKnown RBP12.26□□□□□ -0.45
TCF4-222ENST00000564228 CDR1P51861 262 aa12.26□□□□□ -0.45
TCF4-222ENST00000564228 WTAPQ15007 396 aa12.26□□□□□ -0.45
TCF4-222ENST00000564228 SNCBQ16143 134 aa12.26□□□□□ -0.45
TCF4-222ENST00000564228 SPDYE2Q495Y8 402 aa12.26□□□□□ -0.45
TCF4-222ENST00000564228 NAA35Q5VZE5 725 aa12.26□□□□□ -0.45
TCF4-222ENST00000564228 SND1Q7KZF4 910 aaKnown RBP eCLIP12.26□□□□□ -0.45
TCF4-222ENST00000564228 ZNF444Q8N0Y2 327 aaPredicted RBP12.26□□□□□ -0.45
TCF4-222ENST00000564228 RUFY1Q96T51 708 aa12.26□□□□□ -0.45
TCF4-222ENST00000564228 TRIM6Q9C030 488 aaPredicted RBP12.26□□□□□ -0.45
TCF4-222ENST00000564228 ATP6V0A4Q9HBG4 840 aa12.26□□□□□ -0.45
TCF4-222ENST00000564228 LY9Q9HBG7 655 aa12.26□□□□□ -0.45
TCF4-222ENST00000564228 SERPINB13Q9UIV8 391 aa12.26□□□□□ -0.45
TCF4-222ENST00000564228 FBXO2Q9UK22 296 aaPredicted RBP12.26□□□□□ -0.45
TCF4-222ENST00000564228 SCAF8Q9UPN6 1271 aaKnown RBP12.26□□□□□ -0.45
TCF4-222ENST00000564228 REXO2Q9Y3B8 237 aaKnown RBP12.26□□□□□ -0.45
TCF4-222ENST00000564228 STK36Q9NRP7 1315 aa12.26□□□□□ -0.45
TCF4-222ENST00000564228 FAM196BA6NMK8 535 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 H7C1D1 291 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 POLR2DO15514 142 aaKnown RBP12.25□□□□□ -0.45
TCF4-222ENST00000564228 HSF2BPO75031 334 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 ENTPD3O75355 529 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 SLURP2P0DP57 97 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 EZRP15311 586 aaKnown RBP12.25□□□□□ -0.45
TCF4-222ENST00000564228 TFAP4Q01664 338 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 IFFO1Q0D2I5 559 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 TRIM29Q14134 588 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 ZKSCAN8Q15776 578 aaPredicted RBP12.25□□□□□ -0.45
TCF4-222ENST00000564228 TTMPQ5BVD1 217 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 SH3BP5LQ7L8J4 393 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 CCDC13Q8IYE1 715 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 CRACR2BQ8N4Y2 399 aaPredicted RBP12.25□□□□□ -0.45
TCF4-222ENST00000564228 JAKMIP2Q96AA8 810 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 ZSCAN10Q96SZ4 725 aaPredicted RBP12.25□□□□□ -0.45
TCF4-222ENST00000564228 DHX36Q9H2U1 1008 aaKnown RBP12.25□□□□□ -0.45
TCF4-222ENST00000564228 SLC40A1Q9NP59 571 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 GUCA1BQ9UMX6 200 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 RTN2O75298 545 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms