RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 VTA1Q9NP79 307 aa16.9■□□□□ 0.3
SCAMP2-203ENST00000563663 VPS54Q9P1Q0 977 aa16.9■□□□□ 0.3
SCAMP2-203ENST00000563663 ZHX1Q9UKY1 873 aaPredicted RBP16.9■□□□□ 0.3
SCAMP2-203ENST00000563663 CPLX1O14810 134 aa16.89■□□□□ 0.3
SCAMP2-203ENST00000563663 CTAGE5O15320 804 aa16.89■□□□□ 0.3
SCAMP2-203ENST00000563663 RGS19P49795 217 aa16.89■□□□□ 0.3
SCAMP2-203ENST00000563663 MRPS9P82933 396 aaKnown RBP16.89■□□□□ 0.3
SCAMP2-203ENST00000563663 SSRP1Q08945 709 aaKnown RBP16.89■□□□□ 0.3
SCAMP2-203ENST00000563663 ANO1Q5XXA6 986 aa16.89■□□□□ 0.3
SCAMP2-203ENST00000563663 FCHSD1Q86WN1 690 aa16.89■□□□□ 0.3
SCAMP2-203ENST00000563663 SMARCC2Q8TAQ2 1214 aa16.89■□□□□ 0.3
SCAMP2-203ENST00000563663 CRYGNQ8WXF5 182 aa16.89■□□□□ 0.3
SCAMP2-203ENST00000563663 TMEM106CQ9BVX2 250 aa16.89■□□□□ 0.3
SCAMP2-203ENST00000563663 GNEQ9Y223 722 aaKnown RBP16.89■□□□□ 0.3
SCAMP2-203ENST00000563663 DOCK5Q9H7D0 1870 aa16.89■□□□□ 0.29
SCAMP2-203ENST00000563663 M0R2N6 131 aa16.89■□□□□ 0.29
SCAMP2-203ENST00000563663 ADAMTS4O75173 837 aa16.89■□□□□ 0.29
SCAMP2-203ENST00000563663 NR3C2P08235 984 aa16.89■□□□□ 0.29
SCAMP2-203ENST00000563663 AKR1A1P14550 325 aa16.89■□□□□ 0.29
SCAMP2-203ENST00000563663 ADCYAP1R1P41586 468 aa16.89■□□□□ 0.29
SCAMP2-203ENST00000563663 IRX5P78411 483 aaPredicted RBP16.89■□□□□ 0.29
SCAMP2-203ENST00000563663 VSIG10LQ86VR7 867 aa16.89■□□□□ 0.29
SCAMP2-203ENST00000563663 CUL5Q93034 780 aa16.89■□□□□ 0.29
SCAMP2-203ENST00000563663 GJB4Q9NTQ9 266 aa16.89■□□□□ 0.29
SCAMP2-203ENST00000563663 SMCO2A6NFE2 343 aa16.88■□□□□ 0.29
SCAMP2-203ENST00000563663 EDIL3O43854 480 aa16.88■□□□□ 0.29
SCAMP2-203ENST00000563663 MSCO60682 206 aa16.88■□□□□ 0.29
SCAMP2-203ENST00000563663 ARIH2O95376 493 aa16.88■□□□□ 0.29
SCAMP2-203ENST00000563663 NKX3-2P78367 333 aa16.88■□□□□ 0.29
SCAMP2-203ENST00000563663 CCDC62Q6P9F0 684 aa16.88■□□□□ 0.29
SCAMP2-203ENST00000563663 TRIM22Q8IYM9 498 aa16.88■□□□□ 0.29
SCAMP2-203ENST00000563663 SH3GLB2Q9NR46 395 aa16.88■□□□□ 0.29
SCAMP2-203ENST00000563663 PDE4DIPQ5VU43 2346 aa16.88■□□□□ 0.29
SCAMP2-203ENST00000563663 CDKL5O76039 1030 aa16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 SMPD1P17405 629 aa16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 CNGA1P29973 690 aa16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 ADCY7P51828 1080 aa16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 GJC2Q5T442 439 aaPredicted RBP16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 IFFO2Q5TF58 517 aa16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 ARHGEF16Q5VV41 709 aa16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 CCDC83Q8IWF9 413 aa16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 TMEM87AQ8NBN3 555 aa16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 DIS3LQ8TF46 1054 aaKnown RBP16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 TMEM260Q9NX78 707 aa16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 ATP6V1DQ9Y5K8 247 aa16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 MYADML2A6NDP7 307 aa16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 CAPN15O75808 1086 aa16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 PDE4DQ08499 809 aa16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 CCSAPQ6IQ19 270 aaPredicted RBP16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 CPLX2Q6PUV4 134 aaKnown RBP16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 PGBD1Q96JS3 809 aa16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 UPF3AQ9H1J1 476 aaKnown RBP16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 ORC3Q9UBD5 711 aaPredicted RBP16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 SYNRGQ9UMZ2 1314 aa16.87■□□□□ 0.29
SCAMP2-203ENST00000563663 DUSP11O75319 330 aaKnown RBP16.86■□□□□ 0.29
SCAMP2-203ENST00000563663 COL6A1P12109 1028 aa16.86■□□□□ 0.29
SCAMP2-203ENST00000563663 AKAP17AQ02040 695 aaKnown RBP16.86■□□□□ 0.29
SCAMP2-203ENST00000563663 SEMA3FQ13275 785 aa16.86■□□□□ 0.29
SCAMP2-203ENST00000563663 ZSCAN23Q3MJ62 389 aa16.86■□□□□ 0.29
SCAMP2-203ENST00000563663 PCNX4Q63HM2 1172 aa16.86■□□□□ 0.29
SCAMP2-203ENST00000563663 GPT2Q8TD30 523 aa16.86■□□□□ 0.29
SCAMP2-203ENST00000563663 ZFP91Q96JP5 570 aaPredicted RBP16.86■□□□□ 0.29
SCAMP2-203ENST00000563663 INPP4AQ96PE3 977 aaPredicted RBP16.86■□□□□ 0.29
SCAMP2-203ENST00000563663 FAM184BQ9ULE4 1060 aa16.86■□□□□ 0.29
SCAMP2-203ENST00000563663 PCDHA6Q9UN73 950 aa16.86■□□□□ 0.29
SCAMP2-203ENST00000563663 SMC3Q9UQE7 1217 aa16.86■□□□□ 0.29
SCAMP2-203ENST00000563663 PCDHA8Q9Y5H6 950 aa16.86■□□□□ 0.29
SCAMP2-203ENST00000563663 EIF3JO75822 258 aaKnown RBP16.85■□□□□ 0.29
SCAMP2-203ENST00000563663 ZSCAN22P10073 491 aaPredicted RBP16.85■□□□□ 0.29
SCAMP2-203ENST00000563663 MRPL12P52815 198 aaKnown RBP16.85■□□□□ 0.29
SCAMP2-203ENST00000563663 STXBP2Q15833 593 aa16.85■□□□□ 0.29
SCAMP2-203ENST00000563663 DUSP28Q4G0W2 176 aa16.85■□□□□ 0.29
SCAMP2-203ENST00000563663 FAM177A1Q8N128 213 aaPredicted RBP16.85■□□□□ 0.29
SCAMP2-203ENST00000563663 DAGLBQ8NCG7 672 aa16.85■□□□□ 0.29
SCAMP2-203ENST00000563663 KLHDC9Q8NEP7 349 aa16.85■□□□□ 0.29
SCAMP2-203ENST00000563663 RASGRP4Q8TDF6 673 aa16.85■□□□□ 0.29
SCAMP2-203ENST00000563663 LLPHQ9BRT6 129 aaKnown RBP16.85■□□□□ 0.29
SCAMP2-203ENST00000563663 PHF20Q9BVI0 1012 aa16.85■□□□□ 0.29
SCAMP2-203ENST00000563663 ANO3Q9BYT9 981 aa16.85■□□□□ 0.29
SCAMP2-203ENST00000563663 STX6O43752 255 aa16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 PGK1P00558 417 aa16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 RARBP10826 455 aa16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 SREBF1P36956 1147 aa16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 AP3B2Q13367 1082 aa16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 IQSEC1Q6DN90 963 aa16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 CAVIN1Q6NZI2 390 aaKnown RBP16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 ANKLE1Q8NAG6 615 aa16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 CCDC148Q8NFR7 591 aa16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 RANBP2P49792 3224 aaKnown RBP16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 ITGB5P18084 799 aa16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 CST5P28325 142 aaPredicted RBP16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 GJA9P57773 515 aa16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 TNFAIP2Q03169 654 aa16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 LRRC41Q15345 812 aa16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 SCFD2Q8WU76 684 aa16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 CCDC12Q8WUD4 166 aaPredicted RBP16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 PANK2Q9BZ23 570 aa16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 WDR11Q9BZH6 1224 aa16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 GLT8D2Q9H1C3 349 aa16.84■□□□□ 0.29
SCAMP2-203ENST00000563663 XPNPEP3Q9NQH7 507 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms