RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 PALM3A6NDB9 673 aaPredicted RBP24.4■■□□□ 1.5
CHD9-208ENST00000563410 NR3C2P08235 984 aa24.4■■□□□ 1.5
CHD9-208ENST00000563410 CYP21A2P08686 494 aa24.4■■□□□ 1.5
CHD9-208ENST00000563410 IQCF3P0C7M6 154 aa24.4■■□□□ 1.5
CHD9-208ENST00000563410 MYOGP15173 224 aa24.4■■□□□ 1.5
CHD9-208ENST00000563410 PTH1RQ03431 593 aa24.4■■□□□ 1.5
CHD9-208ENST00000563410 CHST3Q7LGC8 479 aa24.4■■□□□ 1.5
CHD9-208ENST00000563410 DDX41Q9UJV9 622 aaKnown RBP24.4■■□□□ 1.5
CHD9-208ENST00000563410 PCDHA11Q9Y5I1 949 aa24.4■■□□□ 1.5
CHD9-208ENST00000563410 TRANK1O15050 2925 aa24.4■■□□□ 1.5
CHD9-208ENST00000563410 MUC3AQ02505 3323 aa24.39■■□□□ 1.5
CHD9-208ENST00000563410 ZBTB5O15062 677 aa24.39■■□□□ 1.49
CHD9-208ENST00000563410 ATP2A2P16615 1042 aaKnown RBP24.39■■□□□ 1.49
CHD9-208ENST00000563410 CHMLP26374 656 aa24.39■■□□□ 1.49
CHD9-208ENST00000563410 RFC2P35250 354 aa24.39■■□□□ 1.49
CHD9-208ENST00000563410 REV3LO60673 3130 aa24.38■■□□□ 1.49
CHD9-208ENST00000563410 EIF3JO75822 258 aaKnown RBP24.38■■□□□ 1.49
CHD9-208ENST00000563410 CHMP4BP1P59074 171 aa24.38■■□□□ 1.49
CHD9-208ENST00000563410 SESTD1Q86VW0 696 aa24.38■■□□□ 1.49
CHD9-208ENST00000563410 PPM1EQ8WY54 764 aa24.38■■□□□ 1.49
CHD9-208ENST00000563410 EMID1Q96A84 441 aaPredicted RBP24.38■■□□□ 1.49
CHD9-208ENST00000563410 SENP2Q9HC62 589 aa24.38■■□□□ 1.49
CHD9-208ENST00000563410 TAF6LQ9Y6J9 622 aa24.38■■□□□ 1.49
CHD9-208ENST00000563410 RGS20O76081 388 aa24.37■■□□□ 1.49
CHD9-208ENST00000563410 CASTP20810 708 aaKnown RBP24.37■■□□□ 1.49
CHD9-208ENST00000563410 BFSP2Q13515 415 aa24.37■■□□□ 1.49
CHD9-208ENST00000563410 PTGISQ16647 500 aa24.37■■□□□ 1.49
CHD9-208ENST00000563410 GDF6Q6KF10 455 aaPredicted RBP24.37■■□□□ 1.49
CHD9-208ENST00000563410 RETREG2Q8NC44 543 aa24.37■■□□□ 1.49
CHD9-208ENST00000563410 PDCD2LQ9BRP1 358 aa24.37■■□□□ 1.49
CHD9-208ENST00000563410 MAP3K20Q9NYL2 800 aaKnown RBP24.37■■□□□ 1.49
CHD9-208ENST00000563410 NOD1Q9Y239 953 aa24.37■■□□□ 1.49
CHD9-208ENST00000563410 PCDHA1Q9Y5I3 950 aa24.37■■□□□ 1.49
CHD9-208ENST00000563410 TRDNQ13061 729 aa24.36■■□□□ 1.49
CHD9-208ENST00000563410 GRM4Q14833 912 aa24.36■■□□□ 1.49
CHD9-208ENST00000563410 PPP2R2DQ66LE6 453 aa24.36■■□□□ 1.49
CHD9-208ENST00000563410 STOX1Q6ZVD7 989 aa24.36■■□□□ 1.49
CHD9-208ENST00000563410 RUFY2Q8WXA3 655 aa24.36■■□□□ 1.49
CHD9-208ENST00000563410 RIOX1Q9H6W3 641 aa24.36■■□□□ 1.49
CHD9-208ENST00000563410 MRVI1Q9Y6F6 885 aa24.36■■□□□ 1.49
CHD9-208ENST00000563410 U3KPZ7 1027 aaPredicted RBP24.36■■□□□ 1.49
CHD9-208ENST00000563410 NCOR1O75376 2440 aa24.36■■□□□ 1.49
CHD9-208ENST00000563410 PRRC2BQ5JSZ5 2229 aaKnown RBP24.35■■□□□ 1.49
CHD9-208ENST00000563410 ACTN1P12814 892 aa24.35■■□□□ 1.49
CHD9-208ENST00000563410 HOXA13P31271 388 aaPredicted RBP24.35■■□□□ 1.49
CHD9-208ENST00000563410 DGKDQ16760 1214 aa24.35■■□□□ 1.49
CHD9-208ENST00000563410 DHX38Q92620 1227 aaKnown RBP24.35■■□□□ 1.49
CHD9-208ENST00000563410 PIGSQ96S52 555 aa24.35■■□□□ 1.49
CHD9-208ENST00000563410 E7EWF7 191 aa24.34■■□□□ 1.49
CHD9-208ENST00000563410 IFIT3O14879 490 aaKnown RBP24.34■■□□□ 1.49
CHD9-208ENST00000563410 CYTH3O43739 400 aa24.34■■□□□ 1.49
CHD9-208ENST00000563410 IGFBP4P22692 258 aa24.34■■□□□ 1.49
CHD9-208ENST00000563410 TROAPQ12815 778 aa24.34■■□□□ 1.49
CHD9-208ENST00000563410 GPNMBQ14956 572 aa24.34■■□□□ 1.49
CHD9-208ENST00000563410 PGM5Q15124 567 aa24.34■■□□□ 1.49
CHD9-208ENST00000563410 TJAP1Q5JTD0 557 aa24.34■■□□□ 1.49
CHD9-208ENST00000563410 HOMER1Q86YM7 354 aa24.34■■□□□ 1.49
CHD9-208ENST00000563410 SAMD3Q8N6K7 520 aa24.34■■□□□ 1.49
CHD9-208ENST00000563410 IL31RAQ8NI17 732 aa24.34■■□□□ 1.49
CHD9-208ENST00000563410 PPTC7Q8NI37 304 aa24.34■■□□□ 1.49
CHD9-208ENST00000563410 CAGE1Q8TC20 777 aa24.34■■□□□ 1.49
CHD9-208ENST00000563410 SYMPKQ92797 1274 aaKnown RBP24.34■■□□□ 1.49
CHD9-208ENST00000563410 GTF2IRD1Q9UHL9 959 aa24.34■■□□□ 1.49
CHD9-208ENST00000563410 DOCK5Q9H7D0 1870 aa24.34■■□□□ 1.49
CHD9-208ENST00000563410 HAS3O00219 553 aa24.33■■□□□ 1.49
CHD9-208ENST00000563410 SGSM2O43147 1006 aa24.33■■□□□ 1.49
CHD9-208ENST00000563410 MYCLP12524 364 aaPredicted RBP24.33■■□□□ 1.49
CHD9-208ENST00000563410 PSEN2P49810 448 aa24.33■■□□□ 1.49
CHD9-208ENST00000563410 LAMC2Q13753 1193 aa24.33■■□□□ 1.49
CHD9-208ENST00000563410 CCDC85BQ15834 202 aaPredicted RBP24.33■■□□□ 1.49
CHD9-208ENST00000563410 TMEM67Q5HYA8 995 aa24.33■■□□□ 1.49
CHD9-208ENST00000563410 VSIG10LQ86VR7 867 aa24.33■■□□□ 1.49
CHD9-208ENST00000563410 DHX37Q8IY37 1157 aaKnown RBP24.33■■□□□ 1.49
CHD9-208ENST00000563410 AFAP1L1Q8TED9 768 aa24.33■■□□□ 1.49
CHD9-208ENST00000563410 SLC9A7Q96T83 725 aa24.33■■□□□ 1.49
CHD9-208ENST00000563410 FTOQ9C0B1 505 aaKnown RBP eCLIP24.33■■□□□ 1.49
CHD9-208ENST00000563410 HDAC6Q9UBN7 1215 aa24.33■■□□□ 1.49
CHD9-208ENST00000563410 F2P00734 622 aa24.32■■□□□ 1.48
CHD9-208ENST00000563410 CA3P07451 260 aa24.32■■□□□ 1.48
CHD9-208ENST00000563410 ZNF286BP0CG31 522 aa24.32■■□□□ 1.48
CHD9-208ENST00000563410 HOXD8P13378 290 aaPredicted RBP24.32■■□□□ 1.48
CHD9-208ENST00000563410 RBL2Q08999 1139 aa24.32■■□□□ 1.48
CHD9-208ENST00000563410 MYSM1Q5VVJ2 828 aa24.32■■□□□ 1.48
CHD9-208ENST00000563410 CCDC155Q8N6L0 562 aa24.32■■□□□ 1.48
CHD9-208ENST00000563410 NCOA7Q8NI08 942 aa24.32■■□□□ 1.48
CHD9-208ENST00000563410 PHOSPHO2Q8TCD6 241 aa24.32■■□□□ 1.48
CHD9-208ENST00000563410 ALG1Q9BT22 464 aa24.32■■□□□ 1.48
CHD9-208ENST00000563410 ERICH2A1L162 156 aa24.31■■□□□ 1.48
CHD9-208ENST00000563410 ANTXR2P58335 489 aa24.31■■□□□ 1.48
CHD9-208ENST00000563410 MFSD10Q14728 455 aa24.31■■□□□ 1.48
CHD9-208ENST00000563410 WTAPQ15007 396 aa24.31■■□□□ 1.48
CHD9-208ENST00000563410 RALYLQ86SE5 291 aaKnown RBP24.31■■□□□ 1.48
CHD9-208ENST00000563410 PNMA6FA0A0J9YX94 578 aa24.3■■□□□ 1.48
CHD9-208ENST00000563410 ARHGEF15O94989 841 aa24.3■■□□□ 1.48
CHD9-208ENST00000563410 SELPP16109 830 aa24.3■■□□□ 1.48
CHD9-208ENST00000563410 IRX6P78412 446 aaPredicted RBP24.3■■□□□ 1.48
CHD9-208ENST00000563410 SP2Q02086 613 aa24.3■■□□□ 1.48
CHD9-208ENST00000563410 KIAA0753Q2KHM9 967 aa24.3■■□□□ 1.48
CHD9-208ENST00000563410 HSDL1Q3SXM5 330 aa24.3■■□□□ 1.48
CHD9-208ENST00000563410 CELF3Q5SZQ8 465 aaKnown RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 291.2 ms