RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 ZBTB5O15062 677 aa18.32■□□□□ 0.52
CLK3-211ENST00000563297 MYOGP15173 224 aa18.32■□□□□ 0.52
CLK3-211ENST00000563297 CHMP4BP1P59074 171 aa18.32■□□□□ 0.52
CLK3-211ENST00000563297 TRDNQ13061 729 aa18.32■□□□□ 0.52
CLK3-211ENST00000563297 SLC35G1Q2M3R5 365 aa18.32■□□□□ 0.52
CLK3-211ENST00000563297 RETREG2Q8NC44 543 aa18.32■□□□□ 0.52
CLK3-211ENST00000563297 RUFY2Q8WXA3 655 aa18.32■□□□□ 0.52
CLK3-211ENST00000563297 KAT2BQ92831 832 aa18.32■□□□□ 0.52
CLK3-211ENST00000563297 PCDHA1Q9Y5I3 950 aa18.32■□□□□ 0.52
CLK3-211ENST00000563297 U3KPZ7 1027 aaPredicted RBP18.32■□□□□ 0.52
CLK3-211ENST00000563297 CHD7Q9P2D1 2997 aa18.31■□□□□ 0.52
CLK3-211ENST00000563297 ATP2A2P16615 1042 aaKnown RBP18.31■□□□□ 0.52
CLK3-211ENST00000563297 CASTP20810 708 aaKnown RBP18.31■□□□□ 0.52
CLK3-211ENST00000563297 RFC2P35250 354 aa18.31■□□□□ 0.52
CLK3-211ENST00000563297 PTGISQ16647 500 aa18.31■□□□□ 0.52
CLK3-211ENST00000563297 STOX1Q6ZVD7 989 aa18.31■□□□□ 0.52
CLK3-211ENST00000563297 PPM1EQ8WY54 764 aa18.31■□□□□ 0.52
CLK3-211ENST00000563297 CTAGE1Q96RT6 745 aa18.31■□□□□ 0.52
CLK3-211ENST00000563297 RIOX1Q9H6W3 641 aa18.31■□□□□ 0.52
CLK3-211ENST00000563297 PRDM6Q9NQX0 595 aa18.31■□□□□ 0.52
CLK3-211ENST00000563297 MAP3K20Q9NYL2 800 aaKnown RBP18.31■□□□□ 0.52
CLK3-211ENST00000563297 PCDHA11Q9Y5I1 949 aa18.31■□□□□ 0.52
CLK3-211ENST00000563297 IFIT3O14879 490 aaKnown RBP18.3■□□□□ 0.52
CLK3-211ENST00000563297 RGS20O76081 388 aa18.3■□□□□ 0.52
CLK3-211ENST00000563297 BFSP2Q13515 415 aa18.3■□□□□ 0.52
CLK3-211ENST00000563297 GRM4Q14833 912 aa18.3■□□□□ 0.52
CLK3-211ENST00000563297 GDF6Q6KF10 455 aaPredicted RBP18.3■□□□□ 0.52
CLK3-211ENST00000563297 SESTD1Q86VW0 696 aa18.3■□□□□ 0.52
CLK3-211ENST00000563297 EMID1Q96A84 441 aaPredicted RBP18.3■□□□□ 0.52
CLK3-211ENST00000563297 PDCD2LQ9BRP1 358 aa18.3■□□□□ 0.52
CLK3-211ENST00000563297 SENP2Q9HC62 589 aa18.3■□□□□ 0.52
CLK3-211ENST00000563297 NOD1Q9Y239 953 aa18.3■□□□□ 0.52
CLK3-211ENST00000563297 TAF6LQ9Y6J9 622 aa18.3■□□□□ 0.52
CLK3-211ENST00000563297 TTC28Q96AY4 2481 aa18.29■□□□□ 0.52
CLK3-211ENST00000563297 E7EWF7 191 aa18.29■□□□□ 0.52
CLK3-211ENST00000563297 ACTN1P12814 892 aa18.29■□□□□ 0.52
CLK3-211ENST00000563297 LAMC2Q13753 1193 aa18.29■□□□□ 0.52
CLK3-211ENST00000563297 DGKDQ16760 1214 aa18.29■□□□□ 0.52
CLK3-211ENST00000563297 VSIG10LQ86VR7 867 aa18.29■□□□□ 0.52
CLK3-211ENST00000563297 SAMD3Q8N6K7 520 aa18.29■□□□□ 0.52
CLK3-211ENST00000563297 PIGSQ96S52 555 aa18.29■□□□□ 0.52
CLK3-211ENST00000563297 MRVI1Q9Y6F6 885 aa18.29■□□□□ 0.52
CLK3-211ENST00000563297 SGSM2O43147 1006 aa18.28■□□□□ 0.52
CLK3-211ENST00000563297 CYTH3O43739 400 aa18.28■□□□□ 0.52
CLK3-211ENST00000563297 MYCLP12524 364 aaPredicted RBP18.28■□□□□ 0.52
CLK3-211ENST00000563297 IGFBP4P22692 258 aa18.28■□□□□ 0.52
CLK3-211ENST00000563297 HOXA13P31271 388 aaPredicted RBP18.28■□□□□ 0.52
CLK3-211ENST00000563297 TROAPQ12815 778 aa18.28■□□□□ 0.52
CLK3-211ENST00000563297 GPNMBQ14956 572 aa18.28■□□□□ 0.52
CLK3-211ENST00000563297 PPP2R2DQ66LE6 453 aa18.28■□□□□ 0.52
CLK3-211ENST00000563297 HOMER1Q86YM7 354 aa18.28■□□□□ 0.52
CLK3-211ENST00000563297 DHX37Q8IY37 1157 aaKnown RBP18.28■□□□□ 0.52
CLK3-211ENST00000563297 NCOA7Q8NI08 942 aa18.28■□□□□ 0.52
CLK3-211ENST00000563297 SYMPKQ92797 1274 aaKnown RBP18.28■□□□□ 0.52
CLK3-211ENST00000563297 FTOQ9C0B1 505 aaKnown RBP eCLIP18.28■□□□□ 0.52
CLK3-211ENST00000563297 SPTBN5Q9NRC6 3674 aaKnown RBP18.27■□□□□ 0.52
CLK3-211ENST00000563297 ERICH2A1L162 156 aa18.27■□□□□ 0.52
CLK3-211ENST00000563297 PSEN2P49810 448 aa18.27■□□□□ 0.52
CLK3-211ENST00000563297 IRX6P78412 446 aaPredicted RBP18.27■□□□□ 0.52
CLK3-211ENST00000563297 WTAPQ15007 396 aa18.27■□□□□ 0.52
CLK3-211ENST00000563297 PGM5Q15124 567 aa18.27■□□□□ 0.52
CLK3-211ENST00000563297 CCDC85BQ15834 202 aaPredicted RBP18.27■□□□□ 0.52
CLK3-211ENST00000563297 TMEM67Q5HYA8 995 aa18.27■□□□□ 0.52
CLK3-211ENST00000563297 MYSM1Q5VVJ2 828 aa18.27■□□□□ 0.52
CLK3-211ENST00000563297 PPTC7Q8NI37 304 aa18.27■□□□□ 0.52
CLK3-211ENST00000563297 CAGE1Q8TC20 777 aa18.27■□□□□ 0.52
CLK3-211ENST00000563297 PHOSPHO2Q8TCD6 241 aa18.27■□□□□ 0.52
CLK3-211ENST00000563297 DHX38Q92620 1227 aaKnown RBP18.27■□□□□ 0.52
CLK3-211ENST00000563297 MAP4K1Q92918 833 aa18.27■□□□□ 0.52
CLK3-211ENST00000563297 HDAC6Q9UBN7 1215 aa18.27■□□□□ 0.52
CLK3-211ENST00000563297 GTF2IRD1Q9UHL9 959 aa18.27■□□□□ 0.52
CLK3-211ENST00000563297 PNMA6FA0A0J9YX94 578 aa18.26■□□□□ 0.51
CLK3-211ENST00000563297 HAS3O00219 553 aa18.26■□□□□ 0.51
CLK3-211ENST00000563297 SP2Q02086 613 aa18.26■□□□□ 0.51
CLK3-211ENST00000563297 TRAF1Q13077 416 aa18.26■□□□□ 0.51
CLK3-211ENST00000563297 KCNV1Q6PIU1 500 aa18.26■□□□□ 0.51
CLK3-211ENST00000563297 RALYLQ86SE5 291 aaKnown RBP18.26■□□□□ 0.51
CLK3-211ENST00000563297 CCDC155Q8N6L0 562 aa18.26■□□□□ 0.51
CLK3-211ENST00000563297 IL31RAQ8NI17 732 aa18.26■□□□□ 0.51
CLK3-211ENST00000563297 IGDCC4Q8TDY8 1250 aa18.26■□□□□ 0.51
CLK3-211ENST00000563297 AFAP1L1Q8TED9 768 aa18.26■□□□□ 0.51
CLK3-211ENST00000563297 ZFP91Q96JP5 570 aaPredicted RBP18.26■□□□□ 0.51
CLK3-211ENST00000563297 SLC9A7Q96T83 725 aa18.26■□□□□ 0.51
CLK3-211ENST00000563297 ALG1Q9BT22 464 aa18.26■□□□□ 0.51
CLK3-211ENST00000563297 TANC1Q9C0D5 1861 aa18.25■□□□□ 0.51
CLK3-211ENST00000563297 GCOM1H8Y6P7 765 aaPredicted RBP18.25■□□□□ 0.51
CLK3-211ENST00000563297 PPFIA4O75335 1185 aa18.25■□□□□ 0.51
CLK3-211ENST00000563297 F2P00734 622 aa18.25■□□□□ 0.51
CLK3-211ENST00000563297 CA3P07451 260 aa18.25■□□□□ 0.51
CLK3-211ENST00000563297 POLR2MP0CAP2 368 aa18.25■□□□□ 0.51
CLK3-211ENST00000563297 TGFB3P10600 412 aa18.25■□□□□ 0.51
CLK3-211ENST00000563297 HOXD8P13378 290 aaPredicted RBP18.25■□□□□ 0.51
CLK3-211ENST00000563297 ANTXR2P58335 489 aa18.25■□□□□ 0.51
CLK3-211ENST00000563297 RBL2Q08999 1139 aa18.25■□□□□ 0.51
CLK3-211ENST00000563297 MFSD10Q14728 455 aa18.25■□□□□ 0.51
CLK3-211ENST00000563297 SART3Q15020 963 aaKnown RBP18.25■□□□□ 0.51
CLK3-211ENST00000563297 KIAA0753Q2KHM9 967 aa18.25■□□□□ 0.51
CLK3-211ENST00000563297 HSDL1Q3SXM5 330 aa18.25■□□□□ 0.51
CLK3-211ENST00000563297 TJAP1Q5JTD0 557 aa18.25■□□□□ 0.51
CLK3-211ENST00000563297 CELF3Q5SZQ8 465 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms