RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 TBC1D12O60347 775 aa23.83■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 KCNA3P22001 575 aa23.83■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 FXR1P51114 621 aaKnown RBP eCLIP23.83■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 CENPPQ6IPU0 288 aa23.83■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 GUF1Q8N442 669 aaKnown RBP23.83■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 KIAA0895Q8NCT3 520 aa23.83■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 CRYGNQ8WXF5 182 aa23.83■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 NUDT12Q9BQG2 462 aa23.83■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 TMX2Q9Y320 296 aa23.83■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 A0A1W2PRG0 241 aa23.82■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 NCBP1Q09161 790 aaKnown RBP23.82■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 Q4G0T1 1027 aa23.82■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 FOXR2Q6PJQ5 311 aa23.82■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 ZNF507Q8TCN5 953 aa23.82■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 SH2D4AQ9H788 454 aa23.82■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 ABHD10Q9NUJ1 306 aa23.82■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 PRR12Q9ULL5 1215 aa23.82■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 CNTNAP1P78357 1384 aa23.82■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 SOWAHDA6NJG2 315 aa23.81■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 SREBF1P36956 1147 aa23.81■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 STAT2P52630 851 aa23.81■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 USH1GQ495M9 461 aa23.81■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 CYP26C1Q6V0L0 522 aa23.81■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 DYMQ7RTS9 669 aa23.81■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 FAM83AQ86UY5 434 aa23.81■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 ERMNQ8TAM6 284 aa23.81■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 DDX12PQ92771 950 aa23.81■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 TUBGCP2Q9BSJ2 902 aa23.81■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 PDGFDQ9GZP0 370 aaPredicted RBP23.81■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 SLC39A2Q9NP94 309 aa23.81■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 ZBTB21Q9ULJ3 1066 aa23.81■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 PIK3CDO00329 1044 aa23.8■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 PRKCSHP14314 528 aaPredicted RBP23.8■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 HAUS3Q68CZ6 603 aa23.8■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 CNOT6LQ96LI5 555 aaKnown RBP23.8■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 NUP58Q9BVL2 599 aa23.8■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 ZNF215Q9UL58 517 aaPredicted RBP23.8■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 ADGRG1Q9Y653 693 aa23.8■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 PES1O00541 588 aaKnown RBP23.8■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 IDEP14735 1019 aa23.8■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 SNAP25P60880 206 aa23.8■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 LRRC63Q05C16 580 aa23.8■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 RAD9BQ6WBX8 426 aa23.8■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 RETREG2Q8NC44 543 aa23.8■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 FAM20AQ96MK3 541 aa23.8■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 VEZTQ9HBM0 779 aa23.8■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 KRT9P35527 623 aa23.79■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 MTIF2P46199 727 aaKnown RBP23.79■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 EHHADHQ08426 723 aa23.79■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 KCNK18Q7Z418 384 aa23.79■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 CHURC1Q8WUH1 139 aa23.79■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 TSG101Q99816 390 aa23.79■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 SEMA6BQ9H3T3 888 aa23.79■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 ABCB11O95342 1321 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 CASQ1P31415 396 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 CIITAP33076 1130 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 GNG11P61952 73 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 TSR1Q2NL82 804 aaKnown RBP23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 ETNPPLQ8TBG4 499 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 IQCDQ96DY2 449 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 DESI2Q9BSY9 194 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 ZBTB12Q9Y330 459 aaPredicted RBP23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 COL4A5P29400 1685 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 PLA2G6O60733 806 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 CYP3A4P08684 503 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 MTF1Q14872 753 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 ECM1Q16610 540 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 PRR16Q569H4 304 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 SPICE1Q8N0Z3 855 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 PDCL2Q8N4E4 241 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 OR8K1Q8NGG5 319 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 CAPN11Q9UMQ6 739 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 KIAA1024Q9UPX6 916 aa23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 LUC7L2Q9Y383 392 aaKnown RBP23.78■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 ECE1P42892 770 aa23.77■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 FAM160B2Q86V87 743 aa23.77■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 CCDC65Q8IXS2 484 aa23.77■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 HPS3Q969F9 1004 aa23.77■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 PIM2Q9P1W9 311 aa23.77■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 KIF13BQ9NQT8 1826 aa23.77■■□□□ 1.4
VPS9D1-AS1-202ENST00000562866 B4DLN1 442 aa23.76■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 PLA2G4BP0C869 781 aa23.76■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 TGFB2P61812 414 aa23.76■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 TBC1D8BQ0IIM8 1120 aa23.76■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 FKBP15Q5T1M5 1219 aa23.76■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 ACER1Q8TDN7 264 aa23.76■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 GJA10Q969M2 543 aa23.76■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 DNAJC19Q96DA6 116 aa23.76■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 NOC4LQ9BVI4 516 aaKnown RBP23.76■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 VCPKMTQ9H867 229 aa23.76■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 PANK4Q9NVE7 773 aa23.76■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 CGNQ9P2M7 1197 aaKnown RBP23.76■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 COASYQ13057 564 aa23.75■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 FAM83BQ5T0W9 1011 aa23.75■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 MYOCDQ8IZQ8 938 aa23.75■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 ZBED3Q96IU2 234 aaPredicted RBP23.75■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 P2RX7Q99572 595 aaKnown RBP23.75■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 EHMT1Q9H9B1 1298 aa23.75■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 KIF20AO95235 890 aa23.75■■□□□ 1.39
VPS9D1-AS1-202ENST00000562866 SSBP05455 408 aaKnown RBP eCLIP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms