RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 PLTPP55058 493 aa10.27□□□□□ -0.76
CDH1-205ENST00000562836 MARSP56192 900 aaKnown RBP10.27□□□□□ -0.76
CDH1-205ENST00000562836 POU5F1BQ06416 359 aa10.27□□□□□ -0.76
CDH1-205ENST00000562836 SULT2A1Q06520 285 aa10.27□□□□□ -0.76
CDH1-205ENST00000562836 CEP78Q5JTW2 689 aa10.27□□□□□ -0.76
CDH1-205ENST00000562836 VASH1Q7L8A9 365 aaPredicted RBP10.27□□□□□ -0.76
CDH1-205ENST00000562836 GATAD2AQ86YP4 633 aa10.27□□□□□ -0.76
CDH1-205ENST00000562836 SLC7A3Q8WY07 619 aa10.27□□□□□ -0.76
CDH1-205ENST00000562836 EGLN2Q96KS0 407 aa10.27□□□□□ -0.76
CDH1-205ENST00000562836 MRPL9Q9BYD2 267 aaKnown RBP10.27□□□□□ -0.76
CDH1-205ENST00000562836 TRIM5Q9C035 493 aa10.27□□□□□ -0.76
CDH1-205ENST00000562836 SERHL2Q9H4I8 314 aa10.27□□□□□ -0.76
CDH1-205ENST00000562836 IQGAP2Q13576 1575 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 EPN2O95208 641 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 KRT10P13645 584 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 PLCG2P16885 1265 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 AP3M2P53677 418 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 BRD3Q15059 726 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 CCDC183Q5T5S1 534 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 METTL11BQ5VVY1 283 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 NXNQ6DKJ4 435 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 RFPL4BQ6ZWI9 263 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 BEND5Q7L4P6 421 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 VPS36Q86VN1 386 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 APLFQ8IW19 511 aaPredicted RBP10.27□□□□□ -0.77
CDH1-205ENST00000562836 LINS1Q8NG48 757 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 RSAD2Q8WXG1 361 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 SLC39A13Q96H72 371 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 SYT15Q9BQS2 421 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 PLVAPQ9BX97 442 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 PIH1D1Q9NWS0 290 aaKnown RBP10.27□□□□□ -0.77
CDH1-205ENST00000562836 TELO2Q9Y4R8 837 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 USH1CQ9Y6N9 552 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 ERCC6Q03468 1493 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 UBN2Q6ZU65 1347 aa10.27□□□□□ -0.77
CDH1-205ENST00000562836 A0A0J9YVX5 310 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 A8MX80 341 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 SPECC1L-ADORA2AF8WAN1 911 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 PRC1O43663 620 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 CYTH3O43739 400 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 DNAJC8O75937 253 aaPredicted RBP10.26□□□□□ -0.77
CDH1-205ENST00000562836 CETN1Q12798 172 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 CEP68Q76N32 757 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 PODNQ7Z5L7 613 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 DTX3Q8N9I9 347 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 TOR1AIP2Q8NFQ8 470 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 NXPE3Q969Y0 559 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 MIS12Q9H081 205 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 TUT1Q9H6E5 874 aaKnown RBP10.26□□□□□ -0.77
CDH1-205ENST00000562836 VCX3AQ9NNX9 186 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 C12orf4Q9NQ89 552 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 TTF2Q9UNY4 1162 aaKnown RBP10.26□□□□□ -0.77
CDH1-205ENST00000562836 MAGED1Q9Y5V3 778 aaPredicted RBP10.26□□□□□ -0.77
CDH1-205ENST00000562836 SNX5Q9Y5X3 404 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 KRBA1A5PL33 1030 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 KIF28PB7ZC32 967 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 HAT1O14929 419 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 SNPHO15079 494 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 CCNT1O60563 726 aaKnown RBP10.26□□□□□ -0.77
CDH1-205ENST00000562836 ZNF202O95125 648 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 GNRH1P01148 92 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 PORP16435 677 aaPredicted RBP10.26□□□□□ -0.77
CDH1-205ENST00000562836 MYL6P60660 151 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 UBE4AQ14139 1066 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 HLTFQ14527 1009 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDH1-205ENST00000562836 PRR23CQ6ZRP0 262 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 BTN2A1Q7KYR7 527 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 YTHDF3Q7Z739 585 aaKnown RBP10.26□□□□□ -0.77
CDH1-205ENST00000562836 SCAIQ8N9R8 606 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 DPF3Q92784 378 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 SLF1Q9BQI6 1058 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 TCP11L1Q9NUJ3 509 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 CDHR2Q9BYE9 1310 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 S100BP04271 92 aaPredicted RBP10.26□□□□□ -0.77
CDH1-205ENST00000562836 ZC3H6P61129 1189 aaKnown RBP10.26□□□□□ -0.77
CDH1-205ENST00000562836 BASP1P80723 227 aaKnown RBP10.26□□□□□ -0.77
CDH1-205ENST00000562836 NFIAQ12857 509 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
CDH1-205ENST00000562836 CLUL1Q15846 466 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 TAF12Q16514 161 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 CFAP100Q494V2 611 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 SDE2Q6IQ49 451 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 C16orf54Q6UWD8 224 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 TEX9Q8N6V9 391 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 IGSF22Q8N9C0 903 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 FAM133AQ8N9E0 248 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 SLC22A8Q8TCC7 542 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 MOCS1Q9NZB8 636 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 NOP53Q9NZM5 478 aaKnown RBP10.26□□□□□ -0.77
CDH1-205ENST00000562836 LIMCH1Q9UPQ0 1083 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 CFL2Q9Y281 166 aa10.26□□□□□ -0.77
CDH1-205ENST00000562836 MAP3K5Q99683 1374 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 ARHGEF12Q9NZN5 1544 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 TMEM238LA0A1B0GVL6 79 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 ENPP3O14638 875 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 EIF3HO15372 352 aaKnown RBP eCLIP10.25□□□□□ -0.77
CDH1-205ENST00000562836 FLOT1O75955 427 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 BAIAP3O94812 1187 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 GSTT1P30711 240 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 TBC1D9BQ66K14 1250 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms