RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 BDP1A6H8Y1 2624 aa16.97■□□□□ 0.31
SPG7-205ENST00000561945 EIF3JO75822 258 aaKnown RBP16.97■□□□□ 0.31
SPG7-205ENST00000561945 BAIAP3O94812 1187 aa16.97■□□□□ 0.31
SPG7-205ENST00000561945 MYOGP15173 224 aa16.97■□□□□ 0.31
SPG7-205ENST00000561945 GPNMBQ14956 572 aa16.97■□□□□ 0.31
SPG7-205ENST00000561945 LY6KQ17RY6 165 aa16.97■□□□□ 0.31
SPG7-205ENST00000561945 PPP2R2DQ66LE6 453 aa16.97■□□□□ 0.31
SPG7-205ENST00000561945 RETREG2Q8NC44 543 aa16.97■□□□□ 0.31
SPG7-205ENST00000561945 AFG1LQ8WV93 481 aa16.97■□□□□ 0.31
SPG7-205ENST00000561945 PXMP2Q9NR77 195 aa16.97■□□□□ 0.31
SPG7-205ENST00000561945 MYH7BA7E2Y1 1941 aa16.96■□□□□ 0.31
SPG7-205ENST00000561945 PALM3A6NDB9 673 aaPredicted RBP16.96■□□□□ 0.31
SPG7-205ENST00000561945 ZBBXA8MT70 800 aa16.96■□□□□ 0.31
SPG7-205ENST00000561945 HAS3O00219 553 aa16.96■□□□□ 0.31
SPG7-205ENST00000561945 PARNO95453 639 aaKnown RBP16.96■□□□□ 0.31
SPG7-205ENST00000561945 CASTP20810 708 aaKnown RBP16.96■□□□□ 0.31
SPG7-205ENST00000561945 PTGISQ16647 500 aa16.96■□□□□ 0.31
SPG7-205ENST00000561945 TMEM67Q5HYA8 995 aa16.96■□□□□ 0.31
SPG7-205ENST00000561945 STOX1Q6ZVD7 989 aa16.96■□□□□ 0.31
SPG7-205ENST00000561945 DEFB128Q7Z7B8 93 aa16.96■□□□□ 0.31
SPG7-205ENST00000561945 STAG2Q8N3U4 1231 aa16.96■□□□□ 0.31
SPG7-205ENST00000561945 AMNQ9BXJ7 453 aa16.96■□□□□ 0.31
SPG7-205ENST00000561945 GTF2IRD1Q9UHL9 959 aa16.96■□□□□ 0.31
SPG7-205ENST00000561945 TNFRSF10AO00220 468 aa16.95■□□□□ 0.3
SPG7-205ENST00000561945 PPP1R11O60927 126 aaPredicted RBP16.95■□□□□ 0.3
SPG7-205ENST00000561945 RGS20O76081 388 aa16.95■□□□□ 0.3
SPG7-205ENST00000561945 CXCL10P02778 98 aa16.95■□□□□ 0.3
SPG7-205ENST00000561945 NR3C2P08235 984 aa16.95■□□□□ 0.3
SPG7-205ENST00000561945 MRPS5P82675 430 aaKnown RBP16.95■□□□□ 0.3
SPG7-205ENST00000561945 DGKDQ16760 1214 aa16.95■□□□□ 0.3
SPG7-205ENST00000561945 GDF6Q6KF10 455 aaPredicted RBP16.95■□□□□ 0.3
SPG7-205ENST00000561945 SEPT14Q6ZU15 432 aa16.95■□□□□ 0.3
SPG7-205ENST00000561945 CCDC155Q8N6L0 562 aa16.95■□□□□ 0.3
SPG7-205ENST00000561945 PPTC7Q8NI37 304 aa16.95■□□□□ 0.3
SPG7-205ENST00000561945 EXOC6Q8TAG9 804 aa16.95■□□□□ 0.3
SPG7-205ENST00000561945 DHX38Q92620 1227 aaKnown RBP16.95■□□□□ 0.3
SPG7-205ENST00000561945 UBAC1Q9BSL1 405 aa16.95■□□□□ 0.3
SPG7-205ENST00000561945 MAD2L2Q9UI95 211 aa16.95■□□□□ 0.3
SPG7-205ENST00000561945 ZBTB5O15062 677 aa16.94■□□□□ 0.3
SPG7-205ENST00000561945 F2P00734 622 aa16.94■□□□□ 0.3
SPG7-205ENST00000561945 CA3P07451 260 aa16.94■□□□□ 0.3
SPG7-205ENST00000561945 IGFBP4P22692 258 aa16.94■□□□□ 0.3
SPG7-205ENST00000561945 LAMC2Q13753 1193 aa16.94■□□□□ 0.3
SPG7-205ENST00000561945 IFIT1BQ5T764 474 aaKnown RBP16.94■□□□□ 0.3
SPG7-205ENST00000561945 ARHGEF16Q5VV41 709 aa16.94■□□□□ 0.3
SPG7-205ENST00000561945 HERC6Q8IVU3 1022 aa16.94■□□□□ 0.3
SPG7-205ENST00000561945 PPP1R13LQ8WUF5 828 aa16.94■□□□□ 0.3
SPG7-205ENST00000561945 PDCD2LQ9BRP1 358 aa16.94■□□□□ 0.3
SPG7-205ENST00000561945 RIOX1Q9H6W3 641 aa16.94■□□□□ 0.3
SPG7-205ENST00000561945 KLRF2D3W0D1 207 aa16.93■□□□□ 0.3
SPG7-205ENST00000561945 SELPP16109 830 aa16.93■□□□□ 0.3
SPG7-205ENST00000561945 EIF2AK2P19525 551 aaKnown RBP16.93■□□□□ 0.3
SPG7-205ENST00000561945 TAP1Q03518 808 aa16.93■□□□□ 0.3
SPG7-205ENST00000561945 SLC35G1Q2M3R5 365 aa16.93■□□□□ 0.3
SPG7-205ENST00000561945 KCNV1Q6PIU1 500 aa16.93■□□□□ 0.3
SPG7-205ENST00000561945 CYB5R4Q7L1T6 521 aa16.93■□□□□ 0.3
SPG7-205ENST00000561945 VSIG10LQ86VR7 867 aa16.93■□□□□ 0.3
SPG7-205ENST00000561945 PPM1EQ8WY54 764 aa16.93■□□□□ 0.3
SPG7-205ENST00000561945 KATNAL1Q9BW62 490 aa16.93■□□□□ 0.3
SPG7-205ENST00000561945 NOD1Q9Y239 953 aa16.93■□□□□ 0.3
SPG7-205ENST00000561945 MTCH2Q9Y6C9 303 aa16.93■□□□□ 0.3
SPG7-205ENST00000561945 COL4A4P53420 1690 aaPredicted RBP16.93■□□□□ 0.3
SPG7-205ENST00000561945 PPFIA4O75335 1185 aa16.92■□□□□ 0.3
SPG7-205ENST00000561945 CFBP00751 764 aa16.92■□□□□ 0.3
SPG7-205ENST00000561945 TGFB3P10600 412 aa16.92■□□□□ 0.3
SPG7-205ENST00000561945 GSPT1P15170 499 aaKnown RBP16.92■□□□□ 0.3
SPG7-205ENST00000561945 PTK7Q13308 1070 aa16.92■□□□□ 0.3
SPG7-205ENST00000561945 CCDC85BQ15834 202 aaPredicted RBP16.92■□□□□ 0.3
SPG7-205ENST00000561945 TRIM71Q2Q1W2 868 aaKnown RBP16.92■□□□□ 0.3
SPG7-205ENST00000561945 MYSM1Q5VVJ2 828 aa16.92■□□□□ 0.3
SPG7-205ENST00000561945 TRAF7Q6Q0C0 670 aa16.92■□□□□ 0.3
SPG7-205ENST00000561945 LRRC8DQ7L1W4 858 aa16.92■□□□□ 0.3
SPG7-205ENST00000561945 VAT1LQ9HCJ6 419 aa16.92■□□□□ 0.3
SPG7-205ENST00000561945 HDAC6Q9UBN7 1215 aa16.92■□□□□ 0.3
SPG7-205ENST00000561945 FRMPD4Q14CM0 1322 aa16.92■□□□□ 0.3
SPG7-205ENST00000561945 DHX16O60231 1041 aaKnown RBP16.91■□□□□ 0.3
SPG7-205ENST00000561945 ARHGEF15O94989 841 aa16.91■□□□□ 0.3
SPG7-205ENST00000561945 CYP21A2P08686 494 aa16.91■□□□□ 0.3
SPG7-205ENST00000561945 CKBP12277 381 aa16.91■□□□□ 0.3
SPG7-205ENST00000561945 PDE4AP27815 886 aa16.91■□□□□ 0.3
SPG7-205ENST00000561945 HOXC8P31273 242 aa16.91■□□□□ 0.3
SPG7-205ENST00000561945 PSEN2P49810 448 aa16.91■□□□□ 0.3
SPG7-205ENST00000561945 WDR5P61964 334 aaKnown RBP16.91■□□□□ 0.3
SPG7-205ENST00000561945 TROAPQ12815 778 aa16.91■□□□□ 0.3
SPG7-205ENST00000561945 TRAF1Q13077 416 aa16.91■□□□□ 0.3
SPG7-205ENST00000561945 GRM4Q14833 912 aa16.91■□□□□ 0.3
SPG7-205ENST00000561945 PGM5Q15124 567 aa16.91■□□□□ 0.3
SPG7-205ENST00000561945 TTC22Q5TAA0 569 aa16.91■□□□□ 0.3
SPG7-205ENST00000561945 CNKSR3Q6P9H4 555 aa16.91■□□□□ 0.3
SPG7-205ENST00000561945 FTOQ9C0B1 505 aaKnown RBP eCLIP16.91■□□□□ 0.3
SPG7-205ENST00000561945 PCDHA1Q9Y5I3 950 aa16.91■□□□□ 0.3
SPG7-205ENST00000561945 MRVI1Q9Y6F6 885 aa16.91■□□□□ 0.3
SPG7-205ENST00000561945 TCF20Q9UGU0 1960 aaKnown RBP16.9■□□□□ 0.3
SPG7-205ENST00000561945 EPOPA6NHQ4 379 aa16.9■□□□□ 0.3
SPG7-205ENST00000561945 NBNO60934 754 aa16.9■□□□□ 0.3
SPG7-205ENST00000561945 MKRN4PQ13434 485 aaPredicted RBP16.9■□□□□ 0.3
SPG7-205ENST00000561945 MFSD10Q14728 455 aa16.9■□□□□ 0.3
SPG7-205ENST00000561945 KIAA0753Q2KHM9 967 aa16.9■□□□□ 0.3
SPG7-205ENST00000561945 CELF3Q5SZQ8 465 aaKnown RBP16.9■□□□□ 0.3
SPG7-205ENST00000561945 CHST3Q7LGC8 479 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms