RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.28□□□□□ -1.56
HERC1-215ENST00000561436 PLAAQ9Y263 795 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 PHLDB1Q86UU1 1377 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 TRBV23-1A0A0A0MS06 115 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 NPHP3-ACAD11A0A0J9YXS1 232 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 ZC3H12DA2A288 527 aaKnown RBP5.27□□□□□ -1.57
HERC1-215ENST00000561436 ARNTLO00327 626 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 NFIBO00712 420 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 ADCY3O60266 1144 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 ASMTLO95671 621 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 CPP00450 1065 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 TMEM253P0C7T8 217 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 YBX3P16989 372 aaKnown RBP eCLIP5.27□□□□□ -1.57
HERC1-215ENST00000561436 IBSPP21815 317 aaPredicted RBP5.27□□□□□ -1.57
HERC1-215ENST00000561436 HOXC12P31275 282 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 KCNJ6P48051 423 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 ERVFRD-1P60508 538 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 DLG4P78352 724 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 SQSTM1Q13501 440 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 SSPNQ14714 243 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 ERCC6L2Q5T890 1561 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 EEF1DP3Q658K8 133 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 CYP2R1Q6VVX0 501 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 NSMFQ6X4W1 530 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 KIF27Q86VH2 1401 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 ZCRB1Q8TBF4 217 aaKnown RBP5.27□□□□□ -1.57
HERC1-215ENST00000561436 PANK1Q8TE04 598 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 FBXO41Q8TF61 875 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 KCTD13Q8WZ19 329 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 DHRS4Q9BTZ2 278 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 CNTD2Q9H8S5 307 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 ARHGEF4Q9NR80 690 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 MBD1Q9UIS9 605 aaPredicted RBP5.27□□□□□ -1.57
HERC1-215ENST00000561436 SMG5Q9UPR3 1016 aaKnown RBP5.27□□□□□ -1.57
HERC1-215ENST00000561436 SIT1Q9Y3P8 196 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 ABCC2Q92887 1545 aa5.27□□□□□ -1.57
HERC1-215ENST00000561436 TEX14Q8IWB6 1497 aa5.26□□□□□ -1.57
HERC1-215ENST00000561436 UACAQ9BZF9 1416 aa5.26□□□□□ -1.57
HERC1-215ENST00000561436 PRODHO43272 600 aa5.26□□□□□ -1.57
HERC1-215ENST00000561436 TBC1D8O95759 1140 aa5.26□□□□□ -1.57
HERC1-215ENST00000561436 TSPAN15O95858 294 aa5.26□□□□□ -1.57
HERC1-215ENST00000561436 SNRPB2P08579 225 aaKnown RBP5.26□□□□□ -1.57
HERC1-215ENST00000561436 PABPC1P11940 636 aaKnown RBP5.26□□□□□ -1.57
HERC1-215ENST00000561436 CFPP27918 469 aa5.26□□□□□ -1.57
HERC1-215ENST00000561436 L1CAMP32004 1257 aa5.26□□□□□ -1.57
HERC1-215ENST00000561436 CDR1P51861 262 aa5.26□□□□□ -1.57
HERC1-215ENST00000561436 PLEKHN1Q494U1 663 aaPredicted RBP5.26□□□□□ -1.57
HERC1-215ENST00000561436 CCDC103Q8IW40 242 aa5.26□□□□□ -1.57
HERC1-215ENST00000561436 FRS2Q8WU20 508 aa5.26□□□□□ -1.57
HERC1-215ENST00000561436 PUS7Q96PZ0 661 aaKnown RBP5.26□□□□□ -1.57
HERC1-215ENST00000561436 CD320Q9NPF0 282 aa5.26□□□□□ -1.57
HERC1-215ENST00000561436 FBXL7Q9UJT9 491 aa5.26□□□□□ -1.57
HERC1-215ENST00000561436 GLI2P10070 1586 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 ASXL2Q76L83 1435 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 A0A1W2PQJ5 194 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 C7orf72A4D263 438 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 TCAF2A6NFQ2 919 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 DBX1A6NMT0 343 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 MPOP05164 745 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 DBHP09172 617 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 LCP1P13796 627 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 HSP90B1P14625 803 aaKnown RBP5.25□□□□□ -1.57
HERC1-215ENST00000561436 PAMP19021 973 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 ARL4AP40617 200 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 ZNF200P98182 395 aaPredicted RBP5.25□□□□□ -1.57
HERC1-215ENST00000561436 DENND5AQ6IQ26 1287 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 KIAA0907Q7Z7F0 614 aaPredicted RBP5.25□□□□□ -1.57
HERC1-215ENST00000561436 TEX2Q8IWB9 1127 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 DPF3Q92784 378 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 COPS5Q92905 334 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 IER2Q9BTL4 223 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 MRPL4Q9BYD3 311 aaKnown RBP5.25□□□□□ -1.57
HERC1-215ENST00000561436 IRF2BPLQ9H1B7 796 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 NKX2-4Q9H2Z4 354 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 PDLIM7Q9NR12 457 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 CYP26B1Q9NR63 512 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 SIRT5Q9NXA8 310 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 MRPS23Q9Y3D9 190 aaKnown RBP5.25□□□□□ -1.57
HERC1-215ENST00000561436 TOP2BQ02880 1626 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 CARMIL1Q5VZK9 1371 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 SBNO2Q9Y2G9 1366 aa5.25□□□□□ -1.57
HERC1-215ENST00000561436 TEX51A0A1B0GUA7 166 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 F8W031 263 aaPredicted RBP5.24□□□□□ -1.57
HERC1-215ENST00000561436 PLD2O14939 933 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 DNAJC6O75061 913 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 FUCA1P04066 466 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 PI3P19957 117 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 FPR2P25090 351 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 LINC00310P59036 64 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 MAP4K2Q12851 820 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 KCNA10Q16322 511 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 YOD1Q5VVQ6 348 aaPredicted RBP5.24□□□□□ -1.57
HERC1-215ENST00000561436 ANKLE2Q86XL3 938 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 C1QL4Q86Z23 238 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 LRRC56Q8IYG6 542 aaPredicted RBP5.24□□□□□ -1.57
HERC1-215ENST00000561436 TMEM145Q8NBT3 493 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 NPLOC4Q8TAT6 608 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 PPP1R16BQ96T49 567 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 KRTAP9-9Q9BYP9 154 aa5.24□□□□□ -1.57
HERC1-215ENST00000561436 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms