RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	DICER1	Q9UPY3	1922 aa	Known RBP	9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	UPK3BL1	B0FP48	263 aa		9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	UPK3BL2	E5RIL1	263 aa		9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	HOXA10	P31260	410 aa	Predicted RBP	9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	IARS	P41252	1262 aa	Known RBP	9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	NAALADL2	Q58DX5	795 aa		9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	PPP1R42	Q7Z4L9	355 aa		9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	REXO1	Q8N1G1	1221 aa	Known RBP	9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	KCT2	Q8NC54	265 aa		9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	RBM17	Q96I25	401 aa	Known RBP	9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	TMEM87B	Q96K49	555 aa		9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	MFSD14A	Q96MC6	490 aa		9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	UTP14A	Q9BVJ6	771 aa	Known RBP	9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	PRKRIP1	Q9H875	184 aa	Predicted RBP	9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	BABAM1	Q9NWV8	329 aa		9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	CHPF2	Q9P2E5	772 aa		9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	ADAM30	Q9UKF2	790 aa		9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	PPT2	Q9UMR5	302 aa		9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	ARFGEF2	Q9Y6D5	1785 aa		9.12	□□□□□ -0.95
MARK3-223	ENST00000561071	PCNT	O95613	3336 aa		9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	NASP	P49321	788 aa	Predicted RBP	9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	PARP10	Q53GL7	1025 aa		9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	SLC10A5	Q5PT55	438 aa		9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	TMEM201	Q5SNT2	666 aa		9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	RNF43	Q68DV7	783 aa		9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	CCDC81	Q6ZN84	652 aa		9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	ARMCX6	Q7L4S7	300 aa		9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	NLRP10	Q86W26	655 aa		9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	FBXL6	Q8N531	539 aa		9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	GATA6	Q92908	595 aa		9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	TBC1D32	Q96NH3	1257 aa		9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	PSMG3-AS1	Q96PY0	264 aa		9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	CRAMP1	Q96RY5	1269 aa		9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	TAF1D	Q9H5J8	278 aa	Predicted RBP	9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	ANTXR1	Q9H6X2	564 aa		9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	EHMT1	Q9H9B1	1298 aa		9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	DDX21	Q9NR30	783 aa	Known RBP eCLIP	9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	KLHL3	Q9UH77	587 aa		9.11	□□□□□ -0.95
MARK3-223	ENST00000561071	COL4A5	P29400	1685 aa		9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	CHURC1-FNTB	B4DL54	471 aa		9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	FZD9	O00144	591 aa		9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	ELL2	O00472	640 aa	Predicted RBP	9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	APAF1	O14727	1248 aa		9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	ATE1	O95260	518 aa		9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	ATF4	P18848	351 aa	Predicted RBP	9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	FST	P19883	344 aa		9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	SOX9	P48436	509 aa		9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	NFIA	Q12857	509 aa		9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	TCIRG1	Q13488	830 aa		9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	GNL2	Q13823	731 aa	Known RBP	9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	CCDC184	Q52MB2	194 aa		9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	PRAMEF13	Q5VWM6	474 aa		9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	MCAT	Q8IVS2	390 aa	Known RBP	9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	MRPL41	Q8IXM3	137 aa	Known RBP	9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	JMY	Q8N9B5	988 aa		9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	SPATA32	Q96LK8	384 aa		9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	PSMD1	Q99460	953 aa		9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	TRMT112	Q9UI30	125 aa	Known RBP	9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	SNED1	Q8TER0	1413 aa		9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	IBTK	Q9P2D0	1353 aa	Predicted RBP	9.1	□□□□□ -0.95
MARK3-223	ENST00000561071	RNF123	Q5XPI4	1314 aa		9.09	□□□□□ -0.95
MARK3-223	ENST00000561071	DUSP27	Q5VZP5	1158 aa		9.09	□□□□□ -0.95
MARK3-223	ENST00000561071	FBXW10	Q5XX13	1052 aa		9.09	□□□□□ -0.95
MARK3-223	ENST00000561071	SLC6A19	Q695T7	634 aa		9.09	□□□□□ -0.95
MARK3-223	ENST00000561071	ZAR1	Q86SH2	424 aa		9.09	□□□□□ -0.95
MARK3-223	ENST00000561071	FAM13C	Q8NE31	585 aa		9.09	□□□□□ -0.95
MARK3-223	ENST00000561071	JDP2	Q8WYK2	163 aa		9.09	□□□□□ -0.95
MARK3-223	ENST00000561071	FERD3L	Q96RJ6	166 aa		9.09	□□□□□ -0.95
MARK3-223	ENST00000561071	FOXQ1	Q9C009	403 aa		9.09	□□□□□ -0.95
MARK3-223	ENST00000561071	SEMA6B	Q9H3T3	888 aa		9.09	□□□□□ -0.95
MARK3-223	ENST00000561071	HACL1	Q9UJ83	578 aa		9.09	□□□□□ -0.95
MARK3-223	ENST00000561071	ABCC4	O15439	1325 aa		9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	IQCA1L	A6NCM1	817 aa		9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	LEFTY1	O75610	366 aa		9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	LRIG2	O94898	1065 aa		9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	CST3	P01034	146 aa	Predicted RBP	9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	IGLV1-40	P01703	118 aa		9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	F13B	P05160	661 aa		9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	DNAJA1	P31689	397 aa	Known RBP	9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	EPHX2	P34913	555 aa		9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	CAP2	P40123	477 aa		9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	COL9A2	Q14055	689 aa	Predicted RBP	9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	AOC3	Q16853	763 aa		9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	HSP90AB3P	Q58FF7	597 aa		9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	LDHD	Q86WU2	507 aa		9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	TOP6BL	Q8N6T0	577 aa		9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	FAM89A	Q96GI7	184 aa		9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	ZNRF3	Q9ULT6	936 aa		9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	ATP6V0A2	Q9Y487	856 aa		9.08	□□□□□ -0.96
MARK3-223	ENST00000561071	RIC1	Q4ADV7	1423 aa		9.07	□□□□□ -0.96
MARK3-223	ENST00000561071	SLC22A31	A6NKX4	558 aa		9.07	□□□□□ -0.96
MARK3-223	ENST00000561071	FAM170B	A6NMN3	283 aa		9.07	□□□□□ -0.96
MARK3-223	ENST00000561071	RBAK-RBAKDN	I3L0D1	243 aa		9.07	□□□□□ -0.96
MARK3-223	ENST00000561071	PPIP5K2	O43314	1243 aa		9.07	□□□□□ -0.96
MARK3-223	ENST00000561071	FAM87A	P0C7U9	286 aa		9.07	□□□□□ -0.96
MARK3-223	ENST00000561071	ZNF853	P0CG23	659 aa		9.07	□□□□□ -0.96
MARK3-223	ENST00000561071	EPS15	P42566	896 aa		9.07	□□□□□ -0.96
MARK3-223	ENST00000561071	EIF6	P56537	245 aa	Known RBP	9.07	□□□□□ -0.96
MARK3-223	ENST00000561071	OVOS1	Q6IE37	1185 aa		9.07	□□□□□ -0.96
MARK3-223	ENST00000561071	GPC2	Q8N158	579 aa		9.07	□□□□□ -0.96

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