RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 AFG3L2Q9Y4W6 797 aa14.49□□□□□ -0.09
SNX1-211ENST00000560829 RPTORQ8N122 1335 aa14.49□□□□□ -0.09
SNX1-211ENST00000560829 MSH4O15457 936 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 MSNP26038 577 aaKnown RBP14.48□□□□□ -0.09
SNX1-211ENST00000560829 CLCN1P35523 988 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 KMT5BQ4FZB7 885 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 SAMD1Q6SPF0 538 aaPredicted RBP14.48□□□□□ -0.09
SNX1-211ENST00000560829 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.48□□□□□ -0.09
SNX1-211ENST00000560829 GIMAP8Q8ND71 665 aaPredicted RBP14.48□□□□□ -0.09
SNX1-211ENST00000560829 RAD54LQ92698 747 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 GJA10Q969M2 543 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 XPO4Q9C0E2 1151 aaKnown RBP14.48□□□□□ -0.09
SNX1-211ENST00000560829 LRRC27Q9C0I9 530 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 IFNKQ9P0W0 207 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 ADAMTS5Q9UNA0 930 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 SNCAIPQ9Y6H5 919 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 VWA5AO00534 786 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 OAZ1P54368 228 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 HMGCS2P54868 508 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 MAP3K9P80192 1104 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 HAUS3Q68CZ6 603 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 DRC7Q8IY82 874 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 TRMT44Q8IYL2 757 aaKnown RBP14.48□□□□□ -0.09
SNX1-211ENST00000560829 SMYD4Q8IYR2 804 aaPredicted RBP14.48□□□□□ -0.09
SNX1-211ENST00000560829 REPS2Q8NFH8 660 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 RBM46Q8TBY0 533 aaKnown RBP14.48□□□□□ -0.09
SNX1-211ENST00000560829 RAVER2Q9HCJ3 691 aaKnown RBP14.48□□□□□ -0.09
SNX1-211ENST00000560829 RWDD2AQ9UIY3 292 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 MYH7BA7E2Y1 1941 aa14.48□□□□□ -0.09
SNX1-211ENST00000560829 MYPNQ86TC9 1320 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 SYNRGQ9UMZ2 1314 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 PVALEFA0A1B0GWK0 134 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 ADM5C9JUS6 153 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 NFIBO00712 420 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 CBFA2T2O43439 604 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 ZNF500O60304 480 aaPredicted RBP14.47□□□□□ -0.09
SNX1-211ENST00000560829 HOXA7P31268 230 aaPredicted RBP14.47□□□□□ -0.09
SNX1-211ENST00000560829 DSG3P32926 999 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 ZNF76P36508 570 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 VGLL4Q14135 290 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 ECM1Q16610 540 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 CEP55Q53EZ4 464 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 COBLL1Q53SF7 1204 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 CCDC186Q7Z3E2 898 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 ADSSL1Q8N142 457 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 KCTD17Q8N5Z5 321 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 CCDC47Q96A33 483 aaKnown RBP14.47□□□□□ -0.09
SNX1-211ENST00000560829 IMPACTQ9P2X3 320 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 VAV3Q9UKW4 847 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 FRMPD4Q14CM0 1322 aa14.47□□□□□ -0.09
SNX1-211ENST00000560829 PPP1R12BO60237 982 aaPredicted RBP14.46□□□□□ -0.09
SNX1-211ENST00000560829 CCT6AP40227 531 aaKnown RBP14.46□□□□□ -0.09
SNX1-211ENST00000560829 PPP1R2P41236 205 aa14.46□□□□□ -0.09
SNX1-211ENST00000560829 MCM6Q14566 821 aa14.46□□□□□ -0.09
SNX1-211ENST00000560829 CDKAL1Q5VV42 579 aa14.46□□□□□ -0.09
SNX1-211ENST00000560829 CATSPERGQ6ZRH7 1159 aa14.46□□□□□ -0.09
SNX1-211ENST00000560829 KCNK18Q7Z418 384 aa14.46□□□□□ -0.09
SNX1-211ENST00000560829 CPXCR1Q8N123 301 aa14.46□□□□□ -0.09
SNX1-211ENST00000560829 CYP2W1Q8TAV3 490 aa14.46□□□□□ -0.09
SNX1-211ENST00000560829 ATG4CQ96DT6 458 aa14.46□□□□□ -0.09
SNX1-211ENST00000560829 KCNF1Q9H3M0 494 aa14.46□□□□□ -0.09
SNX1-211ENST00000560829 TMOD4Q9NZQ9 345 aa14.46□□□□□ -0.09
SNX1-211ENST00000560829 MYMKA6NI61 221 aa14.46□□□□□ -0.1
SNX1-211ENST00000560829 MEIS1O00470 390 aa14.46□□□□□ -0.1
SNX1-211ENST00000560829 ATP2A1O14983 1001 aa14.46□□□□□ -0.1
SNX1-211ENST00000560829 ALAS1P13196 640 aa14.46□□□□□ -0.1
SNX1-211ENST00000560829 PRCPP42785 496 aa14.46□□□□□ -0.1
SNX1-211ENST00000560829 UBASH3AP57075 661 aa14.46□□□□□ -0.1
SNX1-211ENST00000560829 SETQ01105 290 aaPredicted RBP14.46□□□□□ -0.1
SNX1-211ENST00000560829 PAK1Q13153 545 aa14.46□□□□□ -0.1
SNX1-211ENST00000560829 COG2Q14746 738 aa14.46□□□□□ -0.1
SNX1-211ENST00000560829 CCDC144BQ3MJ40 725 aa14.46□□□□□ -0.1
SNX1-211ENST00000560829 KRT26Q7Z3Y9 468 aa14.46□□□□□ -0.1
SNX1-211ENST00000560829 ERMNQ8TAM6 284 aa14.46□□□□□ -0.1
SNX1-211ENST00000560829 SLC5A5Q92911 643 aa14.46□□□□□ -0.1
SNX1-211ENST00000560829 MAF1Q9H063 256 aa14.46□□□□□ -0.1
SNX1-211ENST00000560829 COL20A1Q9P218 1284 aa14.46□□□□□ -0.1
SNX1-211ENST00000560829 NRBP1Q9UHY1 535 aa14.46□□□□□ -0.1
SNX1-211ENST00000560829 GDAQ9Y2T3 454 aa14.46□□□□□ -0.1
SNX1-211ENST00000560829 CTDP1Q9Y5B0 961 aaPredicted RBP14.46□□□□□ -0.1
SNX1-211ENST00000560829 GLTPD2A6NH11 291 aa14.45□□□□□ -0.1
SNX1-211ENST00000560829 SERPINC1P01008 464 aa14.45□□□□□ -0.1
SNX1-211ENST00000560829 BCRP11274 1271 aa14.45□□□□□ -0.1
SNX1-211ENST00000560829 PTGS1P23219 599 aa14.45□□□□□ -0.1
SNX1-211ENST00000560829 RPA1P27694 616 aa14.45□□□□□ -0.1
SNX1-211ENST00000560829 EPHX2P34913 555 aa14.45□□□□□ -0.1
SNX1-211ENST00000560829 STAT3P40763 770 aa14.45□□□□□ -0.1
SNX1-211ENST00000560829 ASIC1P78348 528 aa14.45□□□□□ -0.1
SNX1-211ENST00000560829 MUM1L1Q5H9M0 696 aa14.45□□□□□ -0.1
SNX1-211ENST00000560829 KLHL10Q6JEL2 608 aa14.45□□□□□ -0.1
SNX1-211ENST00000560829 UNC13DQ70J99 1090 aa14.45□□□□□ -0.1
SNX1-211ENST00000560829 NIPA1Q7RTP0 329 aa14.45□□□□□ -0.1
SNX1-211ENST00000560829 SYTL5Q8TDW5 730 aaPredicted RBP14.45□□□□□ -0.1
SNX1-211ENST00000560829 ZNF830Q96NB3 372 aaPredicted RBP14.45□□□□□ -0.1
SNX1-211ENST00000560829 SAMSN1Q9NSI8 373 aaKnown RBP14.45□□□□□ -0.1
SNX1-211ENST00000560829 PAPPA2Q9BXP8 1791 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 MED24O75448 989 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 PSMD10O75832 226 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 IREB2P48200 963 aaKnown RBP14.44□□□□□ -0.1
SNX1-211ENST00000560829 PDE4DQ08499 809 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms