RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 VSIG10LQ86VR7 867 aa23.91■■□□□ 1.42
ETFA-213ENST00000560309 HOMER1Q86YM7 354 aa23.91■■□□□ 1.42
ETFA-213ENST00000560309 CTCFLQ8NI51 663 aaPredicted RBP23.91■■□□□ 1.42
ETFA-213ENST00000560309 AFG1LQ8WV93 481 aa23.91■■□□□ 1.42
ETFA-213ENST00000560309 PDCD2LQ9BRP1 358 aa23.91■■□□□ 1.42
ETFA-213ENST00000560309 KATNAL1Q9BW62 490 aa23.91■■□□□ 1.42
ETFA-213ENST00000560309 WNT8AQ9H1J5 351 aa23.91■■□□□ 1.42
ETFA-213ENST00000560309 ZNF576Q9H609 170 aa23.91■■□□□ 1.42
ETFA-213ENST00000560309 NOD1Q9Y239 953 aa23.91■■□□□ 1.42
ETFA-213ENST00000560309 UMODL1Q5DID0 1318 aa23.9■■□□□ 1.42
ETFA-213ENST00000560309 PPP1R11O60927 126 aaPredicted RBP23.9■■□□□ 1.42
ETFA-213ENST00000560309 DDAH1O94760 285 aa23.9■■□□□ 1.42
ETFA-213ENST00000560309 MCM5P33992 734 aa23.9■■□□□ 1.42
ETFA-213ENST00000560309 CCDC155Q8N6L0 562 aa23.9■■□□□ 1.42
ETFA-213ENST00000560309 TMEM87BQ96K49 555 aa23.9■■□□□ 1.42
ETFA-213ENST00000560309 PBX4Q9BYU1 374 aa23.9■■□□□ 1.42
ETFA-213ENST00000560309 COL6A3P12111 3177 aa23.9■■□□□ 1.42
ETFA-213ENST00000560309 PPFIA4O75335 1185 aa23.89■■□□□ 1.41
ETFA-213ENST00000560309 STAM2O75886 525 aa23.89■■□□□ 1.41
ETFA-213ENST00000560309 CYP2C9P11712 490 aa23.89■■□□□ 1.41
ETFA-213ENST00000560309 ACTN1P12814 892 aa23.89■■□□□ 1.41
ETFA-213ENST00000560309 FOSL2P15408 326 aa23.89■■□□□ 1.41
ETFA-213ENST00000560309 DHX37Q8IY37 1157 aaKnown RBP23.89■■□□□ 1.41
ETFA-213ENST00000560309 PPTC7Q8NI37 304 aa23.89■■□□□ 1.41
ETFA-213ENST00000560309 BAZ2BQ9UIF8 2168 aaKnown RBP23.89■■□□□ 1.41
ETFA-213ENST00000560309 CYTH3O43739 400 aa23.88■■□□□ 1.41
ETFA-213ENST00000560309 PARNO95453 639 aaKnown RBP23.88■■□□□ 1.41
ETFA-213ENST00000560309 CALM1P0DP23 149 aa23.88■■□□□ 1.41
ETFA-213ENST00000560309 CALM2P0DP24 149 aa23.88■■□□□ 1.41
ETFA-213ENST00000560309 CALM3P0DP25 149 aa23.88■■□□□ 1.41
ETFA-213ENST00000560309 MYCLP12524 364 aaPredicted RBP23.88■■□□□ 1.41
ETFA-213ENST00000560309 CCND2P30279 289 aa23.88■■□□□ 1.41
ETFA-213ENST00000560309 ANTXR2P58335 489 aa23.88■■□□□ 1.41
ETFA-213ENST00000560309 PGM5Q15124 567 aa23.88■■□□□ 1.41
ETFA-213ENST00000560309 CHST3Q7LGC8 479 aa23.88■■□□□ 1.41
ETFA-213ENST00000560309 OTOP2Q7RTS6 562 aa23.88■■□□□ 1.41
ETFA-213ENST00000560309 MAFAQ8NHW3 353 aaPredicted RBP23.88■■□□□ 1.41
ETFA-213ENST00000560309 CAGE1Q8TC20 777 aa23.88■■□□□ 1.41
ETFA-213ENST00000560309 MYLIPQ8WY64 445 aa23.88■■□□□ 1.41
ETFA-213ENST00000560309 SPZ1Q9BXG8 430 aa23.88■■□□□ 1.41
ETFA-213ENST00000560309 SLC4A7Q9Y6M7 1214 aa23.88■■□□□ 1.41
ETFA-213ENST00000560309 LIFRP42702 1097 aa23.87■■□□□ 1.41
ETFA-213ENST00000560309 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.87■■□□□ 1.41
ETFA-213ENST00000560309 ZNF654Q8IZM8 581 aa23.87■■□□□ 1.41
ETFA-213ENST00000560309 RRP36Q96EU6 259 aaKnown RBP23.87■■□□□ 1.41
ETFA-213ENST00000560309 ESYT1Q9BSJ8 1104 aa23.87■■□□□ 1.41
ETFA-213ENST00000560309 LSG1Q9H089 658 aaKnown RBP23.87■■□□□ 1.41
ETFA-213ENST00000560309 LY9Q9HBG7 655 aa23.87■■□□□ 1.41
ETFA-213ENST00000560309 SENP2Q9HC62 589 aa23.87■■□□□ 1.41
ETFA-213ENST00000560309 TAF6LQ9Y6J9 622 aa23.87■■□□□ 1.41
ETFA-213ENST00000560309 CCDC69A6NI79 296 aa23.86■■□□□ 1.41
ETFA-213ENST00000560309 IQCF3P0C7M6 154 aa23.86■■□□□ 1.41
ETFA-213ENST00000560309 HOXA13P31271 388 aaPredicted RBP23.86■■□□□ 1.41
ETFA-213ENST00000560309 GRIN2CQ14957 1233 aa23.86■■□□□ 1.41
ETFA-213ENST00000560309 PTGISQ16647 500 aa23.86■■□□□ 1.41
ETFA-213ENST00000560309 GNPTABQ3T906 1256 aa23.86■■□□□ 1.41
ETFA-213ENST00000560309 BMP2KLQ5H9B9 411 aa23.86■■□□□ 1.41
ETFA-213ENST00000560309 RNF20Q5VTR2 975 aa23.86■■□□□ 1.41
ETFA-213ENST00000560309 CENPQQ7L2Z9 268 aaPredicted RBP23.86■■□□□ 1.41
ETFA-213ENST00000560309 SCLYQ96I15 445 aa23.86■■□□□ 1.41
ETFA-213ENST00000560309 CXXC1Q9P0U4 656 aaPredicted RBP23.86■■□□□ 1.41
ETFA-213ENST00000560309 SEC63Q9UGP8 760 aaKnown RBP23.86■■□□□ 1.41
ETFA-213ENST00000560309 LAMA2P24043 3122 aaKnown RBP23.86■■□□□ 1.41
ETFA-213ENST00000560309 PRC1O43663 620 aa23.85■■□□□ 1.41
ETFA-213ENST00000560309 HOXD8P13378 290 aaPredicted RBP23.85■■□□□ 1.41
ETFA-213ENST00000560309 NECTIN1Q15223 517 aa23.85■■□□□ 1.41
ETFA-213ENST00000560309 SLC35G1Q2M3R5 365 aa23.85■■□□□ 1.41
ETFA-213ENST00000560309 MYSM1Q5VVJ2 828 aa23.85■■□□□ 1.41
ETFA-213ENST00000560309 NFXL1Q6ZNB6 911 aa23.85■■□□□ 1.41
ETFA-213ENST00000560309 C7orf31Q8N865 590 aa23.85■■□□□ 1.41
ETFA-213ENST00000560309 AFAP1L1Q8TED9 768 aa23.85■■□□□ 1.41
ETFA-213ENST00000560309 KAT2BQ92831 832 aa23.85■■□□□ 1.41
ETFA-213ENST00000560309 CUL5Q93034 780 aa23.85■■□□□ 1.41
ETFA-213ENST00000560309 GRXCR1A8MXD5 290 aa23.84■■□□□ 1.41
ETFA-213ENST00000560309 CELF3Q5SZQ8 465 aaKnown RBP23.84■■□□□ 1.41
ETFA-213ENST00000560309 XRRA1Q6P2D8 792 aa23.84■■□□□ 1.41
ETFA-213ENST00000560309 FCHSD1Q86WN1 690 aa23.84■■□□□ 1.41
ETFA-213ENST00000560309 PHOSPHO2Q8TCD6 241 aa23.84■■□□□ 1.41
ETFA-213ENST00000560309 GAS2L1Q99501 681 aaPredicted RBP23.84■■□□□ 1.41
ETFA-213ENST00000560309 SLC28A3Q9HAS3 691 aa23.84■■□□□ 1.41
ETFA-213ENST00000560309 GTF2IRD1Q9UHL9 959 aa23.84■■□□□ 1.41
ETFA-213ENST00000560309 MYH7BA7E2Y1 1941 aa23.84■■□□□ 1.41
ETFA-213ENST00000560309 ZBBXA8MT70 800 aa23.83■■□□□ 1.41
ETFA-213ENST00000560309 PIK3CDO00329 1044 aa23.83■■□□□ 1.41
ETFA-213ENST00000560309 SLC27A2O14975 620 aa23.83■■□□□ 1.41
ETFA-213ENST00000560309 RGS20O76081 388 aa23.83■■□□□ 1.41
ETFA-213ENST00000560309 PBX2P40425 430 aa23.83■■□□□ 1.41
ETFA-213ENST00000560309 PSEN2P49810 448 aa23.83■■□□□ 1.41
ETFA-213ENST00000560309 CREB3L3Q68CJ9 461 aa23.83■■□□□ 1.41
ETFA-213ENST00000560309 MLXIPQ9HAP2 919 aa23.83■■□□□ 1.41
ETFA-213ENST00000560309 PCDHA11Q9Y5I1 949 aa23.83■■□□□ 1.41
ETFA-213ENST00000560309 MYO9BQ13459 2157 aa23.82■■□□□ 1.4
ETFA-213ENST00000560309 HAS3O00219 553 aa23.82■■□□□ 1.4
ETFA-213ENST00000560309 SH2B2O14492 632 aaPredicted RBP23.82■■□□□ 1.4
ETFA-213ENST00000560309 F2P00734 622 aa23.82■■□□□ 1.4
ETFA-213ENST00000560309 ICAM3P32942 547 aa23.82■■□□□ 1.4
ETFA-213ENST00000560309 CHMP4BP1P59074 171 aa23.82■■□□□ 1.4
ETFA-213ENST00000560309 RBL2Q08999 1139 aa23.82■■□□□ 1.4
ETFA-213ENST00000560309 NEDD9Q14511 834 aa23.82■■□□□ 1.4
ETFA-213ENST00000560309 DEFB128Q7Z7B8 93 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms