RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 SP2Q02086 613 aa12.48□□□□□ -0.41
TPM1-217ENST00000559108 CCDC144BQ3MJ40 725 aa12.48□□□□□ -0.41
TPM1-217ENST00000559108 PCNX4Q63HM2 1172 aa12.48□□□□□ -0.41
TPM1-217ENST00000559108 TRMT44Q8IYL2 757 aaKnown RBP12.48□□□□□ -0.41
TPM1-217ENST00000559108 SAMD3Q8N6K7 520 aa12.48□□□□□ -0.41
TPM1-217ENST00000559108 FBXO18Q8NFZ0 1043 aa12.48□□□□□ -0.41
TPM1-217ENST00000559108 COPS5Q92905 334 aa12.48□□□□□ -0.41
TPM1-217ENST00000559108 DEFB118Q96PH6 123 aa12.48□□□□□ -0.41
TPM1-217ENST00000559108 RTEL1Q9NZ71 1219 aa12.48□□□□□ -0.41
TPM1-217ENST00000559108 IGLV3-22A0A075B6J6 115 aa12.47□□□□□ -0.41
TPM1-217ENST00000559108 FAM86B1E9PN63 330 aa12.47□□□□□ -0.41
TPM1-217ENST00000559108 FAM86B2P0C5J1 330 aa12.47□□□□□ -0.41
TPM1-217ENST00000559108 PDE4DQ08499 809 aa12.47□□□□□ -0.41
TPM1-217ENST00000559108 AP3B2Q13367 1082 aa12.47□□□□□ -0.41
TPM1-217ENST00000559108 CCDC62Q6P9F0 684 aa12.47□□□□□ -0.41
TPM1-217ENST00000559108 SEPT14Q6ZU15 432 aa12.47□□□□□ -0.41
TPM1-217ENST00000559108 DIS3L2Q8IYB7 885 aaKnown RBP12.47□□□□□ -0.41
TPM1-217ENST00000559108 SPRYD3Q8NCJ5 442 aa12.47□□□□□ -0.41
TPM1-217ENST00000559108 CCDC12Q8WUD4 166 aaPredicted RBP12.47□□□□□ -0.41
TPM1-217ENST00000559108 LENG9Q96B70 501 aa12.47□□□□□ -0.41
TPM1-217ENST00000559108 C8orf76Q96K31 380 aa12.47□□□□□ -0.41
TPM1-217ENST00000559108 INPP4AQ96PE3 977 aaPredicted RBP12.47□□□□□ -0.41
TPM1-217ENST00000559108 IWS1Q96ST2 819 aa12.47□□□□□ -0.41
TPM1-217ENST00000559108 ABHD16BQ9H3Z7 469 aa12.47□□□□□ -0.41
TPM1-217ENST00000559108 VTA1Q9NP79 307 aa12.47□□□□□ -0.41
TPM1-217ENST00000559108 UBIAD1Q9Y5Z9 338 aa12.47□□□□□ -0.41
TPM1-217ENST00000559108 LOC102724159A0A0B4J2E5 919 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 SPDYE3A6NKU9 549 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 SEPT4O43236 478 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 SORBS3O60504 671 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 CNGA1P29973 690 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 GNA11P29992 359 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 SOX10P56693 466 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 ARHGAP4P98171 946 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 PWP2Q15269 919 aaKnown RBP12.46□□□□□ -0.41
TPM1-217ENST00000559108 INF2Q27J81 1249 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 HSCBQ8IWL3 235 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 TBCKQ8TEA7 893 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 WASF1Q92558 559 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 UIMC1Q96RL1 719 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 WDR11Q9BZH6 1224 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 CRISPLD2Q9H0B8 497 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 RNF208Q9H0X6 261 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 HMX1Q9NP08 348 aaPredicted RBP12.46□□□□□ -0.41
TPM1-217ENST00000559108 DDX20Q9UHI6 824 aaKnown RBP12.46□□□□□ -0.41
TPM1-217ENST00000559108 SMC3Q9UQE7 1217 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 GNEQ9Y223 722 aaKnown RBP12.46□□□□□ -0.41
TPM1-217ENST00000559108 CNPY2Q9Y2B0 182 aa12.46□□□□□ -0.41
TPM1-217ENST00000559108 SYNRGQ9UMZ2 1314 aa12.45□□□□□ -0.42
TPM1-217ENST00000559108 ATP9AO75110 1047 aa12.45□□□□□ -0.42
TPM1-217ENST00000559108 ADAMTS4O75173 837 aa12.45□□□□□ -0.42
TPM1-217ENST00000559108 TDP2O95551 362 aa12.45□□□□□ -0.42
TPM1-217ENST00000559108 ARP10275 920 aa12.45□□□□□ -0.42
TPM1-217ENST00000559108 CCND2P30279 289 aa12.45□□□□□ -0.42
TPM1-217ENST00000559108 KRT2P35908 639 aa12.45□□□□□ -0.42
TPM1-217ENST00000559108 PKP1Q13835 747 aa12.45□□□□□ -0.42
TPM1-217ENST00000559108 STXBP2Q15833 593 aa12.45□□□□□ -0.42
TPM1-217ENST00000559108 LY6KQ17RY6 165 aa12.45□□□□□ -0.42
TPM1-217ENST00000559108 PIK3AP1Q6ZUJ8 805 aa12.45□□□□□ -0.42
TPM1-217ENST00000559108 U2AF1L4Q8WU68 220 aaKnown RBP12.45□□□□□ -0.42
TPM1-217ENST00000559108 GJA10Q969M2 543 aa12.45□□□□□ -0.42
TPM1-217ENST00000559108 INTS4Q96HW7 963 aaKnown RBP12.45□□□□□ -0.42
TPM1-217ENST00000559108 TSHZ2Q9NRE2 1034 aa12.45□□□□□ -0.42
TPM1-217ENST00000559108 NRBP1Q9UHY1 535 aa12.45□□□□□ -0.42
TPM1-217ENST00000559108 DDX41Q9UJV9 622 aaKnown RBP12.45□□□□□ -0.42
TPM1-217ENST00000559108 SPATA31C2B4DYI2 1134 aa12.44□□□□□ -0.42
TPM1-217ENST00000559108 SLC37A4O43826 429 aa12.44□□□□□ -0.42
TPM1-217ENST00000559108 EIF3JO75822 258 aaKnown RBP12.44□□□□□ -0.42
TPM1-217ENST00000559108 PGK1P00558 417 aa12.44□□□□□ -0.42
TPM1-217ENST00000559108 FOSP01100 380 aaPredicted RBP12.44□□□□□ -0.42
TPM1-217ENST00000559108 GJB1P08034 283 aa12.44□□□□□ -0.42
TPM1-217ENST00000559108 CYP3A4P08684 503 aa12.44□□□□□ -0.42
TPM1-217ENST00000559108 EN2P19622 333 aaPredicted RBP12.44□□□□□ -0.42
TPM1-217ENST00000559108 UBA1P22314 1058 aaKnown RBP12.44□□□□□ -0.42
TPM1-217ENST00000559108 ARHGAP1Q07960 439 aa12.44□□□□□ -0.42
TPM1-217ENST00000559108 NBR1Q14596 966 aa12.44□□□□□ -0.42
TPM1-217ENST00000559108 GALNT17Q6IS24 598 aa12.44□□□□□ -0.42
TPM1-217ENST00000559108 TEX2Q8IWB9 1127 aa12.44□□□□□ -0.42
TPM1-217ENST00000559108 FAM177A1Q8N128 213 aaPredicted RBP12.44□□□□□ -0.42
TPM1-217ENST00000559108 FAM184AQ8NB25 1140 aa12.44□□□□□ -0.42
TPM1-217ENST00000559108 DIS3LQ8TF46 1054 aaKnown RBP12.44□□□□□ -0.42
TPM1-217ENST00000559108 PKD2L1Q9P0L9 805 aa12.44□□□□□ -0.42
TPM1-217ENST00000559108 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.44□□□□□ -0.42
TPM1-217ENST00000559108 RBAK-RBAKDNI3L0D1 243 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 MEIS1O00470 390 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 SGPL1O95470 568 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 AKR1A1P14550 325 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 KCNA2P16389 499 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 SYT1P21579 422 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 ICAM3P32942 547 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 CIITAP33076 1130 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 GJA8P48165 433 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 TOB1P50616 345 aaPredicted RBP12.43□□□□□ -0.42
TPM1-217ENST00000559108 TNFAIP2Q03169 654 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 ITGB3BPQ13352 177 aaPredicted RBP12.43□□□□□ -0.42
TPM1-217ENST00000559108 DUSP28Q4G0W2 176 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 CCSAPQ6IQ19 270 aaPredicted RBP12.43□□□□□ -0.42
TPM1-217ENST00000559108 KRT25Q7Z3Z0 450 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 BICD2Q8TD16 824 aa12.43□□□□□ -0.42
TPM1-217ENST00000559108 MBOAT7Q96N66 472 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms