RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 ANO1Q5XXA6 986 aa14.19□□□□□ -0.14
GABPB1-208ENST00000558970 OLFML2BQ68BL8 750 aa14.19□□□□□ -0.14
GABPB1-208ENST00000558970 GALNT17Q6IS24 598 aa14.19□□□□□ -0.14
GABPB1-208ENST00000558970 SEPT14Q6ZU15 432 aa14.19□□□□□ -0.14
GABPB1-208ENST00000558970 ZNF467Q7Z7K2 595 aaPredicted RBP14.19□□□□□ -0.14
GABPB1-208ENST00000558970 TBCKQ8TEA7 893 aa14.19□□□□□ -0.14
GABPB1-208ENST00000558970 CNPY2Q9Y2B0 182 aa14.19□□□□□ -0.14
GABPB1-208ENST00000558970 B4DLN1 442 aa14.18□□□□□ -0.14
GABPB1-208ENST00000558970 M0R2N6 131 aa14.18□□□□□ -0.14
GABPB1-208ENST00000558970 FOSP01100 380 aaPredicted RBP14.18□□□□□ -0.14
GABPB1-208ENST00000558970 PTGS1P23219 599 aa14.18□□□□□ -0.14
GABPB1-208ENST00000558970 CCND3P30281 292 aaPredicted RBP14.18□□□□□ -0.14
GABPB1-208ENST00000558970 ZNF76P36508 570 aa14.18□□□□□ -0.14
GABPB1-208ENST00000558970 ARHGAP4P98171 946 aa14.18□□□□□ -0.14
GABPB1-208ENST00000558970 STXBP2Q15833 593 aa14.18□□□□□ -0.14
GABPB1-208ENST00000558970 KRT25Q7Z3Z0 450 aa14.18□□□□□ -0.14
GABPB1-208ENST00000558970 TRPV1Q8NER1 839 aa14.18□□□□□ -0.14
GABPB1-208ENST00000558970 PXYLP1Q8TE99 480 aa14.18□□□□□ -0.14
GABPB1-208ENST00000558970 LENG1Q96BZ8 264 aaPredicted RBP14.18□□□□□ -0.14
GABPB1-208ENST00000558970 PDGFCQ9NRA1 345 aa14.18□□□□□ -0.14
GABPB1-208ENST00000558970 PKD2L1Q9P0L9 805 aa14.18□□□□□ -0.14
GABPB1-208ENST00000558970 FRMPD4Q14CM0 1322 aa14.17□□□□□ -0.14
GABPB1-208ENST00000558970 SYNGAP1Q96PV0 1343 aa14.17□□□□□ -0.14
GABPB1-208ENST00000558970 STX6O43752 255 aa14.17□□□□□ -0.14
GABPB1-208ENST00000558970 PDCP20941 246 aa14.17□□□□□ -0.14
GABPB1-208ENST00000558970 SREBF1P36956 1147 aa14.17□□□□□ -0.14
GABPB1-208ENST00000558970 MRPS9P82933 396 aaKnown RBP14.17□□□□□ -0.14
GABPB1-208ENST00000558970 PKP1Q13835 747 aa14.17□□□□□ -0.14
GABPB1-208ENST00000558970 MTFR1Q15390 333 aa14.17□□□□□ -0.14
GABPB1-208ENST00000558970 LETM2Q2VYF4 491 aa14.17□□□□□ -0.14
GABPB1-208ENST00000558970 TMEM63BQ5T3F8 832 aa14.17□□□□□ -0.14
GABPB1-208ENST00000558970 MAMDC4Q6UXC1 1216 aa14.17□□□□□ -0.14
GABPB1-208ENST00000558970 TRMT44Q8IYL2 757 aaKnown RBP14.17□□□□□ -0.14
GABPB1-208ENST00000558970 TNFRSF25Q93038 417 aa14.17□□□□□ -0.14
GABPB1-208ENST00000558970 IWS1Q96ST2 819 aa14.17□□□□□ -0.14
GABPB1-208ENST00000558970 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.16□□□□□ -0.14
GABPB1-208ENST00000558970 CYBAP13498 195 aa14.16□□□□□ -0.14
GABPB1-208ENST00000558970 EDNRBP24530 442 aa14.16□□□□□ -0.14
GABPB1-208ENST00000558970 ADCYAP1R1P41586 468 aa14.16□□□□□ -0.14
GABPB1-208ENST00000558970 ACVR2BQ13705 512 aa14.16□□□□□ -0.14
GABPB1-208ENST00000558970 FOXD4L6Q3SYB3 417 aaPredicted RBP14.16□□□□□ -0.14
GABPB1-208ENST00000558970 GJC2Q5T442 439 aaPredicted RBP14.16□□□□□ -0.14
GABPB1-208ENST00000558970 PCNX4Q63HM2 1172 aa14.16□□□□□ -0.14
GABPB1-208ENST00000558970 FOXD4L3Q6VB84 417 aaPredicted RBP14.16□□□□□ -0.14
GABPB1-208ENST00000558970 NOSTRINQ8IVI9 506 aa14.16□□□□□ -0.14
GABPB1-208ENST00000558970 FAM177A1Q8N128 213 aaPredicted RBP14.16□□□□□ -0.14
GABPB1-208ENST00000558970 CYP2W1Q8TAV3 490 aa14.16□□□□□ -0.14
GABPB1-208ENST00000558970 WDR11Q9BZH6 1224 aa14.16□□□□□ -0.14
GABPB1-208ENST00000558970 MAF1Q9H063 256 aa14.16□□□□□ -0.14
GABPB1-208ENST00000558970 UNC93B1Q9H1C4 597 aa14.16□□□□□ -0.14
GABPB1-208ENST00000558970 ABHD16BQ9H3Z7 469 aa14.16□□□□□ -0.14
GABPB1-208ENST00000558970 WNT7AO00755 349 aa14.15□□□□□ -0.14
GABPB1-208ENST00000558970 TDP2O95551 362 aa14.15□□□□□ -0.14
GABPB1-208ENST00000558970 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
GABPB1-208ENST00000558970 ZNF865P0CJ78 1059 aaPredicted RBP14.15□□□□□ -0.14
GABPB1-208ENST00000558970 NBR1Q14596 966 aa14.15□□□□□ -0.14
GABPB1-208ENST00000558970 CCDC144BQ3MJ40 725 aa14.15□□□□□ -0.14
GABPB1-208ENST00000558970 MCTP2Q6DN12 878 aa14.15□□□□□ -0.14
GABPB1-208ENST00000558970 VSIG10LQ86VR7 867 aa14.15□□□□□ -0.14
GABPB1-208ENST00000558970 MSL3Q8N5Y2 521 aaKnown RBP14.15□□□□□ -0.14
GABPB1-208ENST00000558970 KATNBL1Q9H079 304 aa14.15□□□□□ -0.14
GABPB1-208ENST00000558970 FOXP1Q9H334 677 aaPredicted RBP14.15□□□□□ -0.14
GABPB1-208ENST00000558970 MTMR6Q9Y217 621 aa14.15□□□□□ -0.14
GABPB1-208ENST00000558970 MRVI1Q9Y6F6 885 aa14.15□□□□□ -0.14
GABPB1-208ENST00000558970 FAM86B1E9PN63 330 aa14.14□□□□□ -0.15
GABPB1-208ENST00000558970 ADCY6O43306 1168 aa14.14□□□□□ -0.15
GABPB1-208ENST00000558970 CCNT1O60563 726 aaKnown RBP14.14□□□□□ -0.15
GABPB1-208ENST00000558970 EIF3JO75822 258 aaKnown RBP14.14□□□□□ -0.15
GABPB1-208ENST00000558970 RGS20O76081 388 aa14.14□□□□□ -0.15
GABPB1-208ENST00000558970 ARIH2O95376 493 aa14.14□□□□□ -0.15
GABPB1-208ENST00000558970 FAM86B2P0C5J1 330 aa14.14□□□□□ -0.15
GABPB1-208ENST00000558970 CCL5P13501 91 aa14.14□□□□□ -0.15
GABPB1-208ENST00000558970 ITGB5P18084 799 aa14.14□□□□□ -0.15
GABPB1-208ENST00000558970 LY6KQ17RY6 165 aa14.14□□□□□ -0.15
GABPB1-208ENST00000558970 PRR16Q569H4 304 aa14.14□□□□□ -0.15
GABPB1-208ENST00000558970 TAPT1Q6NXT6 567 aa14.14□□□□□ -0.15
GABPB1-208ENST00000558970 FAM173BQ6P4H8 233 aa14.14□□□□□ -0.15
GABPB1-208ENST00000558970 NEK8Q86SG6 692 aa14.14□□□□□ -0.15
GABPB1-208ENST00000558970 MORC4Q8TE76 937 aa14.14□□□□□ -0.15
GABPB1-208ENST00000558970 COPS5Q92905 334 aa14.14□□□□□ -0.15
GABPB1-208ENST00000558970 RNF208Q9H0X6 261 aa14.14□□□□□ -0.15
GABPB1-208ENST00000558970 HMX1Q9NP08 348 aaPredicted RBP14.14□□□□□ -0.15
GABPB1-208ENST00000558970 VTA1Q9NP79 307 aa14.14□□□□□ -0.15
GABPB1-208ENST00000558970 LOC102724159A0A0B4J2E5 919 aa14.13□□□□□ -0.15
GABPB1-208ENST00000558970 IGHA2P01877 340 aa14.13□□□□□ -0.15
GABPB1-208ENST00000558970 ARP10275 920 aa14.13□□□□□ -0.15
GABPB1-208ENST00000558970 TXNP10599 105 aaKnown RBP14.13□□□□□ -0.15
GABPB1-208ENST00000558970 U2AF2P26368 475 aaKnown RBP eCLIP14.13□□□□□ -0.15
GABPB1-208ENST00000558970 SP4Q02446 784 aa14.13□□□□□ -0.15
GABPB1-208ENST00000558970 MTMR1Q13613 665 aa14.13□□□□□ -0.15
GABPB1-208ENST00000558970 PWP2Q15269 919 aaKnown RBP14.13□□□□□ -0.15
GABPB1-208ENST00000558970 GNPTABQ3T906 1256 aa14.13□□□□□ -0.15
GABPB1-208ENST00000558970 NLRX1Q86UT6 975 aa14.13□□□□□ -0.15
GABPB1-208ENST00000558970 PLA2G4DQ86XP0 818 aa14.13□□□□□ -0.15
GABPB1-208ENST00000558970 CRYGNQ8WXF5 182 aa14.13□□□□□ -0.15
GABPB1-208ENST00000558970 GJA10Q969M2 543 aa14.13□□□□□ -0.15
GABPB1-208ENST00000558970 ZNF333Q96JL9 665 aa14.13□□□□□ -0.15
GABPB1-208ENST00000558970 MXRA8Q9BRK3 442 aa14.13□□□□□ -0.15
GABPB1-208ENST00000558970 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.13□□□□□ -0.151e-6■■■□□ 14.7
GABPB1-208ENST00000558970 DDX39AO00148 427 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms