RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-215ENST00000558787 SUPT16HQ9Y5B9 1047 aaKnown RBP8.3□□□□□ -1.08
MARK3-215ENST00000558787 DDX49Q9Y6V7 483 aaKnown RBP8.3□□□□□ -1.08
MARK3-215ENST00000558787 FRMPD3Q5JV73 1810 aa8.3□□□□□ -1.08
MARK3-215ENST00000558787 ZNFX1Q9P2E3 1918 aaKnown RBP8.3□□□□□ -1.08
MARK3-215ENST00000558787 SMCHD1A6NHR9 2005 aa8.3□□□□□ -1.08
MARK3-215ENST00000558787 ZNF236Q9UL36 1845 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 GREB1LQ9C091 1923 aaPredicted RBP8.29□□□□□ -1.08
MARK3-215ENST00000558787 SLC35F4A4IF30 521 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 ZBBXA8MT70 800 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 ESPNB1AK53 854 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 TMEM232C9JQI7 657 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 KBTBD13C9JR72 458 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 SNAI1O95863 264 aaPredicted RBP8.29□□□□□ -1.08
MARK3-215ENST00000558787 ZNF865P0CJ78 1059 aaPredicted RBP8.29□□□□□ -1.08
MARK3-215ENST00000558787 RARBP10826 455 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 BMP3P12645 472 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 MCCP23508 829 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 PTGIRP43119 386 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 PDE1AP54750 535 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 CNTN2Q02246 1040 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 PDE4BQ07343 736 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 TRIM60Q495X7 471 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 KCTD1Q719H9 257 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 TDHQ8IZJ6 230 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 GPR161Q8N6U8 529 aaKnown RBP8.29□□□□□ -1.08
MARK3-215ENST00000558787 CNTNAP3BQ96NU0 1288 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 LBHD1Q9BQE6 289 aaPredicted RBP8.29□□□□□ -1.08
MARK3-215ENST00000558787 CNTNAP3Q9BZ76 1288 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 LNPKQ9C0E8 428 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 SLC38A10Q9HBR0 1119 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 ZNF287Q9HBT7 754 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 XPNPEP3Q9NQH7 507 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 PRDM5Q9NQX1 630 aaPredicted RBP8.29□□□□□ -1.08
MARK3-215ENST00000558787 HOMER2Q9NSB8 354 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 FEM1BQ9UK73 627 aa8.29□□□□□ -1.08
MARK3-215ENST00000558787 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.29□□□□□ -1.08
MARK3-215ENST00000558787 CTDP1Q9Y5B0 961 aaPredicted RBP8.29□□□□□ -1.08
MARK3-215ENST00000558787 DNAJC25-GNG10A0A024R161 153 aa8.28□□□□□ -1.08
MARK3-215ENST00000558787 A0A0D9SFI3 127 aa8.28□□□□□ -1.08
MARK3-215ENST00000558787 RANBP6O60518 1105 aaKnown RBP8.28□□□□□ -1.08
MARK3-215ENST00000558787 LILRA1O75019 489 aa8.28□□□□□ -1.08
MARK3-215ENST00000558787 NEFLP07196 543 aa8.28□□□□□ -1.08
MARK3-215ENST00000558787 SLC3A2P08195 630 aaKnown RBP8.28□□□□□ -1.08
MARK3-215ENST00000558787 ADD1P35611 737 aaKnown RBP8.28□□□□□ -1.08
MARK3-215ENST00000558787 TLE2Q04725 743 aa8.28□□□□□ -1.08
MARK3-215ENST00000558787 IKQ13123 557 aaPredicted RBP8.28□□□□□ -1.08
MARK3-215ENST00000558787 NMIQ13287 307 aaPredicted RBP8.28□□□□□ -1.08
MARK3-215ENST00000558787 HDAC1Q13547 482 aaPredicted RBP8.28□□□□□ -1.08
MARK3-215ENST00000558787 TMEM132AQ24JP5 1023 aa8.28□□□□□ -1.08
MARK3-215ENST00000558787 LRIT3Q3SXY7 679 aa8.28□□□□□ -1.08
MARK3-215ENST00000558787 CCDC174Q6PII3 467 aa8.28□□□□□ -1.08
MARK3-215ENST00000558787 ANKRD35Q8N283 1001 aa8.28□□□□□ -1.08
MARK3-215ENST00000558787 DEFB123Q8N688 67 aa8.28□□□□□ -1.08
MARK3-215ENST00000558787 GMCL1P1Q8NEA9 526 aa8.28□□□□□ -1.08
MARK3-215ENST00000558787 EVI5LQ96CN4 794 aa8.28□□□□□ -1.08
MARK3-215ENST00000558787 FGD4Q96M96 766 aa8.28□□□□□ -1.08
MARK3-215ENST00000558787 ZHX1Q9UKY1 873 aaPredicted RBP8.28□□□□□ -1.08
MARK3-215ENST00000558787 STX8Q9UNK0 236 aa8.28□□□□□ -1.08
MARK3-215ENST00000558787 CNPY2Q9Y2B0 182 aa8.28□□□□□ -1.08
MARK3-215ENST00000558787 DIS3Q9Y2L1 958 aaKnown RBP8.28□□□□□ -1.08
MARK3-215ENST00000558787 PCDHB9Q9Y5E1 797 aa8.28□□□□□ -1.08
MARK3-215ENST00000558787 MYH4Q9Y623 1939 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 LAMA2P24043 3122 aaKnown RBP8.27□□□□□ -1.09
MARK3-215ENST00000558787 TRIM43BA6NCK2 446 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 MYADML2A6NDP7 307 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 TSPY2A6NKD2 308 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 ATP2A1O14983 1001 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 ADCY6O43306 1168 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 IGHDP01880 384 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 FGAP02671 866 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 PTGS1P23219 599 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 ITGB8P26012 769 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 COPB2P35606 906 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 SLC1A4P43007 532 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 HAND2P61296 217 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 RRP12Q5JTH9 1297 aaKnown RBP8.27□□□□□ -1.09
MARK3-215ENST00000558787 C9orf50Q5SZB4 431 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 TTBK2Q6IQ55 1244 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 SV2AQ7L0J3 742 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 ZNF589Q86UQ0 364 aaPredicted RBP8.27□□□□□ -1.09
MARK3-215ENST00000558787 EXOC6Q8TAG9 804 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 RNF217Q8TC41 542 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 BADQ92934 168 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 TRIM43Q96BQ3 446 aaPredicted RBP8.27□□□□□ -1.09
MARK3-215ENST00000558787 COL25A1Q9BXS0 654 aaPredicted RBP8.27□□□□□ -1.09
MARK3-215ENST00000558787 PDLIM7Q9NR12 457 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 TOMM22Q9NS69 142 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 PRKAG2Q9UGJ0 569 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 PHF24Q9UPV7 400 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 ZNF536O15090 1300 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 SYNRGQ9UMZ2 1314 aa8.27□□□□□ -1.09
MARK3-215ENST00000558787 COL6A3P12111 3177 aa8.26□□□□□ -1.09
MARK3-215ENST00000558787 A0A0C4DFX4 3053 aa8.26□□□□□ -1.09
MARK3-215ENST00000558787 PLIN4Q96Q06 1357 aa8.26□□□□□ -1.09
MARK3-215ENST00000558787 PLXNA1Q9UIW2 1896 aa8.26□□□□□ -1.09
MARK3-215ENST00000558787 A0A1W2PQ45 241 aaPredicted RBP8.26□□□□□ -1.09
MARK3-215ENST00000558787 A0A1W2PQY0 241 aa8.26□□□□□ -1.09
MARK3-215ENST00000558787 PQBP1O60828 265 aaKnown RBP8.26□□□□□ -1.09
MARK3-215ENST00000558787 ADAMTS4O75173 837 aa8.26□□□□□ -1.09
MARK3-215ENST00000558787 ALAS1P13196 640 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms