RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 DHX32Q7L7V1 743 aaKnown RBP17.92■□□□□ 0.46
CSHL1-208ENST00000558609 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.92■□□□□ 0.46
CSHL1-208ENST00000558609 SRBD1Q8N5C6 995 aaKnown RBP17.92■□□□□ 0.46
CSHL1-208ENST00000558609 FANCBQ8NB91 859 aa17.92■□□□□ 0.46
CSHL1-208ENST00000558609 PIBF1Q8WXW3 757 aa17.92■□□□□ 0.46
CSHL1-208ENST00000558609 DDX41Q9UJV9 622 aaKnown RBP17.92■□□□□ 0.46
CSHL1-208ENST00000558609 EYSQ5T1H1 3165 aa17.91■□□□□ 0.46
CSHL1-208ENST00000558609 ARHGAP1Q07960 439 aa17.91■□□□□ 0.46
CSHL1-208ENST00000558609 PGM5Q15124 567 aa17.91■□□□□ 0.46
CSHL1-208ENST00000558609 KCNB2Q92953 911 aa17.91■□□□□ 0.46
CSHL1-208ENST00000558609 EMID1Q96A84 441 aaPredicted RBP17.91■□□□□ 0.46
CSHL1-208ENST00000558609 FAM161BQ96MY7 647 aa17.91■□□□□ 0.46
CSHL1-208ENST00000558609 TRPV6Q9H1D0 765 aa17.91■□□□□ 0.46
CSHL1-208ENST00000558609 ALDH8A1Q9H2A2 487 aaPredicted RBP17.91■□□□□ 0.46
CSHL1-208ENST00000558609 SEC63Q9UGP8 760 aaKnown RBP17.91■□□□□ 0.46
CSHL1-208ENST00000558609 SCN10AQ9Y5Y9 1956 aa17.91■□□□□ 0.46
CSHL1-208ENST00000558609 B4GALT4O60513 344 aa17.9■□□□□ 0.46
CSHL1-208ENST00000558609 RGS20O76081 388 aa17.9■□□□□ 0.46
CSHL1-208ENST00000558609 MYCLP12524 364 aaPredicted RBP17.9■□□□□ 0.46
CSHL1-208ENST00000558609 RXRAP19793 462 aa17.9■□□□□ 0.46
CSHL1-208ENST00000558609 PPIGQ13427 754 aaKnown RBP eCLIP17.9■□□□□ 0.46
CSHL1-208ENST00000558609 NBPF20Q3BBV1 942 aa17.9■□□□□ 0.46
CSHL1-208ENST00000558609 ADCK5Q3MIX3 580 aa17.9■□□□□ 0.46
CSHL1-208ENST00000558609 KCNV1Q6PIU1 500 aa17.9■□□□□ 0.46
CSHL1-208ENST00000558609 FCHSD1Q86WN1 690 aa17.9■□□□□ 0.46
CSHL1-208ENST00000558609 TMEM199Q8N511 208 aa17.9■□□□□ 0.46
CSHL1-208ENST00000558609 AFG1LQ8WV93 481 aa17.9■□□□□ 0.46
CSHL1-208ENST00000558609 PPP1R12CQ9BZL4 782 aa17.9■□□□□ 0.46
CSHL1-208ENST00000558609 SPTBN5Q9NRC6 3674 aaKnown RBP17.9■□□□□ 0.46
CSHL1-208ENST00000558609 HMGB1P09429 215 aaKnown RBP17.89■□□□□ 0.45
CSHL1-208ENST00000558609 SUPT20HL2P0C7V6 817 aa17.89■□□□□ 0.45
CSHL1-208ENST00000558609 TGFB3P10600 412 aa17.89■□□□□ 0.45
CSHL1-208ENST00000558609 CCND2P30279 289 aa17.89■□□□□ 0.45
CSHL1-208ENST00000558609 LAMC2Q13753 1193 aa17.89■□□□□ 0.45
CSHL1-208ENST00000558609 NFRKBQ6P4R8 1299 aa17.89■□□□□ 0.45
CSHL1-208ENST00000558609 SYNE3Q6ZMZ3 975 aa17.89■□□□□ 0.45
CSHL1-208ENST00000558609 TMTC3Q6ZXV5 915 aa17.89■□□□□ 0.45
CSHL1-208ENST00000558609 CMTR1Q8N1G2 835 aaKnown RBP17.89■□□□□ 0.45
CSHL1-208ENST00000558609 IL31RAQ8NI17 732 aa17.89■□□□□ 0.45
CSHL1-208ENST00000558609 HIPK3Q9H422 1215 aa17.89■□□□□ 0.45
CSHL1-208ENST00000558609 MRVI1Q9Y6F6 885 aa17.89■□□□□ 0.45
CSHL1-208ENST00000558609 FRMPD4Q14CM0 1322 aa17.89■□□□□ 0.45
CSHL1-208ENST00000558609 PIK3CDO00329 1044 aa17.88■□□□□ 0.45
CSHL1-208ENST00000558609 MMP3P08254 477 aa17.88■□□□□ 0.45
CSHL1-208ENST00000558609 CSF2RAP15509 400 aa17.88■□□□□ 0.45
CSHL1-208ENST00000558609 CASTP20810 708 aaKnown RBP17.88■□□□□ 0.45
CSHL1-208ENST00000558609 CYP2C18P33260 490 aa17.88■□□□□ 0.45
CSHL1-208ENST00000558609 SMAD3P84022 425 aaKnown RBP17.88■□□□□ 0.45
CSHL1-208ENST00000558609 PTPN11Q06124 597 aaPredicted RBP17.88■□□□□ 0.45
CSHL1-208ENST00000558609 APOA5Q6Q788 366 aa17.88■□□□□ 0.45
CSHL1-208ENST00000558609 C16orf59Q7L2K0 433 aa17.88■□□□□ 0.45
CSHL1-208ENST00000558609 MICU3Q86XE3 530 aa17.88■□□□□ 0.45
CSHL1-208ENST00000558609 RAB11FIP4Q86YS3 637 aa17.88■□□□□ 0.45
CSHL1-208ENST00000558609 RNPC3Q96LT9 517 aaKnown RBP17.88■□□□□ 0.45
CSHL1-208ENST00000558609 TCEANC2Q96MN5 208 aa17.88■□□□□ 0.45
CSHL1-208ENST00000558609 NOC4LQ9BVI4 516 aaKnown RBP17.88■□□□□ 0.45
CSHL1-208ENST00000558609 MEIS2O14770 477 aa17.87■□□□□ 0.45
CSHL1-208ENST00000558609 STAM2O75886 525 aa17.87■□□□□ 0.45
CSHL1-208ENST00000558609 HSPA4P34932 840 aa17.87■□□□□ 0.45
CSHL1-208ENST00000558609 DGKDQ16760 1214 aa17.87■□□□□ 0.45
CSHL1-208ENST00000558609 DHX37Q8IY37 1157 aaKnown RBP17.87■□□□□ 0.45
CSHL1-208ENST00000558609 PPTC7Q8NI37 304 aa17.87■□□□□ 0.45
CSHL1-208ENST00000558609 CUL5Q93034 780 aa17.87■□□□□ 0.45
CSHL1-208ENST00000558609 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.87■□□□□ 0.45
CSHL1-208ENST00000558609 TRMT13Q9NUP7 481 aaKnown RBP17.87■□□□□ 0.45
CSHL1-208ENST00000558609 RBM28Q9NW13 759 aaKnown RBP17.87■□□□□ 0.45
CSHL1-208ENST00000558609 BRPF3Q9ULD4 1205 aa17.87■□□□□ 0.45
CSHL1-208ENST00000558609 REC8O95072 547 aa17.86■□□□□ 0.45
CSHL1-208ENST00000558609 FAM47CQ5HY64 1035 aa17.86■□□□□ 0.45
CSHL1-208ENST00000558609 TMEM240Q5SV17 173 aa17.86■□□□□ 0.45
CSHL1-208ENST00000558609 CELF3Q5SZQ8 465 aaKnown RBP17.86■□□□□ 0.45
CSHL1-208ENST00000558609 MYSM1Q5VVJ2 828 aa17.86■□□□□ 0.45
CSHL1-208ENST00000558609 USP17L6PQ6QN14 398 aa17.86■□□□□ 0.45
CSHL1-208ENST00000558609 CCDC82Q8N4S0 544 aa17.86■□□□□ 0.45
CSHL1-208ENST00000558609 SMARCC2Q8TAQ2 1214 aa17.86■□□□□ 0.45
CSHL1-208ENST00000558609 KAT2BQ92831 832 aa17.86■□□□□ 0.45
CSHL1-208ENST00000558609 IL23AQ9NPF7 189 aa17.86■□□□□ 0.45
CSHL1-208ENST00000558609 UMODL1Q5DID0 1318 aa17.86■□□□□ 0.45
CSHL1-208ENST00000558609 ZBTB43O43298 467 aa17.85■□□□□ 0.45
CSHL1-208ENST00000558609 HOXD8P13378 290 aaPredicted RBP17.85■□□□□ 0.45
CSHL1-208ENST00000558609 ICAM3P32942 547 aa17.85■□□□□ 0.45
CSHL1-208ENST00000558609 RCAN1P53805 252 aa17.85■□□□□ 0.45
CSHL1-208ENST00000558609 MRPS9P82933 396 aaKnown RBP17.85■□□□□ 0.45
CSHL1-208ENST00000558609 SP2Q02086 613 aa17.85■□□□□ 0.45
CSHL1-208ENST00000558609 GNPTABQ3T906 1256 aa17.85■□□□□ 0.45
CSHL1-208ENST00000558609 RASIP1Q5U651 963 aa17.85■□□□□ 0.45
CSHL1-208ENST00000558609 XRRA1Q6P2D8 792 aa17.85■□□□□ 0.45
CSHL1-208ENST00000558609 SESTD1Q86VW0 696 aa17.85■□□□□ 0.45
CSHL1-208ENST00000558609 INPP4AQ96PE3 977 aaPredicted RBP17.85■□□□□ 0.45
CSHL1-208ENST00000558609 WNT8AQ9H1J5 351 aa17.85■□□□□ 0.45
CSHL1-208ENST00000558609 PSTPIP2Q9H939 334 aa17.85■□□□□ 0.45
CSHL1-208ENST00000558609 SNX14Q9Y5W7 946 aa17.85■□□□□ 0.45
CSHL1-208ENST00000558609 MYH7BA7E2Y1 1941 aa17.84■□□□□ 0.45
CSHL1-208ENST00000558609 PRUNE2Q8WUY3 3088 aa17.84■□□□□ 0.45
CSHL1-208ENST00000558609 hCG_1642624A0A1W2PR95 340 aa17.84■□□□□ 0.45
CSHL1-208ENST00000558609 PPFIA4O75335 1185 aa17.84■□□□□ 0.45
CSHL1-208ENST00000558609 GGPS1O95749 300 aa17.84■□□□□ 0.45
CSHL1-208ENST00000558609 CYP2C9P11712 490 aa17.84■□□□□ 0.45
CSHL1-208ENST00000558609 UBA1P22314 1058 aaKnown RBP17.84■□□□□ 0.45
CSHL1-208ENST00000558609 CCL23P55773 120 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms