RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 IL27Q8NEV9 243 aa14.33□□□□□ -0.12
LRRC28-206ENST00000558471 WDR11Q9BZH6 1224 aa14.33□□□□□ -0.12
LRRC28-206ENST00000558471 GLT8D2Q9H1C3 349 aa14.33□□□□□ -0.12
LRRC28-206ENST00000558471 C6orf50Q9HD87 102 aa14.33□□□□□ -0.12
LRRC28-206ENST00000558471 SH3GLB2Q9NR46 395 aa14.33□□□□□ -0.12
LRRC28-206ENST00000558471 ORC3Q9UBD5 711 aaPredicted RBP14.33□□□□□ -0.12
LRRC28-206ENST00000558471 STK36Q9NRP7 1315 aa14.33□□□□□ -0.12
LRRC28-206ENST00000558471 SYNRGQ9UMZ2 1314 aa14.33□□□□□ -0.12
LRRC28-206ENST00000558471 DNM1LO00429 736 aa14.32□□□□□ -0.12
LRRC28-206ENST00000558471 DYNC1LI2O43237 492 aaPredicted RBP14.32□□□□□ -0.12
LRRC28-206ENST00000558471 JAK2O60674 1132 aa14.32□□□□□ -0.12
LRRC28-206ENST00000558471 RGS20O76081 388 aa14.32□□□□□ -0.12
LRRC28-206ENST00000558471 ARIH2O95376 493 aa14.32□□□□□ -0.12
LRRC28-206ENST00000558471 TXNP10599 105 aaKnown RBP14.32□□□□□ -0.12
LRRC28-206ENST00000558471 GNA11P29992 359 aa14.32□□□□□ -0.12
LRRC28-206ENST00000558471 GJA9P57773 515 aa14.32□□□□□ -0.12
LRRC28-206ENST00000558471 DUSP28Q4G0W2 176 aa14.32□□□□□ -0.12
LRRC28-206ENST00000558471 JAKMIP3Q5VZ66 844 aa14.32□□□□□ -0.12
LRRC28-206ENST00000558471 CCDC148Q8NFR7 591 aa14.32□□□□□ -0.12
LRRC28-206ENST00000558471 SCFD2Q8WU76 684 aa14.32□□□□□ -0.12
LRRC28-206ENST00000558471 PGBD1Q96JS3 809 aa14.32□□□□□ -0.12
LRRC28-206ENST00000558471 SH2B1Q9NRF2 756 aaPredicted RBP14.32□□□□□ -0.12
LRRC28-206ENST00000558471 RTEL1Q9NZ71 1219 aa14.32□□□□□ -0.12
LRRC28-206ENST00000558471 MYADML2A6NDP7 307 aa14.31□□□□□ -0.12
LRRC28-206ENST00000558471 CTAGE5O15320 804 aa14.31□□□□□ -0.12
LRRC28-206ENST00000558471 FOSP01100 380 aaPredicted RBP14.31□□□□□ -0.12
LRRC28-206ENST00000558471 NLRP5P59047 1200 aa14.31□□□□□ -0.12
LRRC28-206ENST00000558471 TTLL4Q14679 1199 aa14.31□□□□□ -0.12
LRRC28-206ENST00000558471 PCNX4Q63HM2 1172 aa14.31□□□□□ -0.12
LRRC28-206ENST00000558471 CCDC62Q6P9F0 684 aa14.31□□□□□ -0.12
LRRC28-206ENST00000558471 NECAB2Q7Z6G3 386 aa14.31□□□□□ -0.12
LRRC28-206ENST00000558471 RNF180Q86T96 592 aa14.31□□□□□ -0.12
LRRC28-206ENST00000558471 KLHDC9Q8NEP7 349 aa14.31□□□□□ -0.12
LRRC28-206ENST00000558471 COPS5Q92905 334 aa14.31□□□□□ -0.12
LRRC28-206ENST00000558471 UPF3AQ9H1J1 476 aaKnown RBP14.31□□□□□ -0.12
LRRC28-206ENST00000558471 GJB4Q9NTQ9 266 aa14.31□□□□□ -0.12
LRRC28-206ENST00000558471 DDX41Q9UJV9 622 aaKnown RBP14.31□□□□□ -0.12
LRRC28-206ENST00000558471 Q9Y3F1 56 aa14.31□□□□□ -0.12
LRRC28-206ENST00000558471 C6orf222P0C671 652 aaPredicted RBP14.3□□□□□ -0.12
LRRC28-206ENST00000558471 COL6A1P12109 1028 aa14.3□□□□□ -0.12
LRRC28-206ENST00000558471 NKX3-2P78367 333 aa14.3□□□□□ -0.12
LRRC28-206ENST00000558471 MLLT1Q03111 559 aaPredicted RBP14.3□□□□□ -0.12
LRRC28-206ENST00000558471 AP3B2Q13367 1082 aa14.3□□□□□ -0.12
LRRC28-206ENST00000558471 LY6KQ17RY6 165 aa14.3□□□□□ -0.12
LRRC28-206ENST00000558471 CCSAPQ6IQ19 270 aaPredicted RBP14.3□□□□□ -0.12
LRRC28-206ENST00000558471 XRRA1Q6P2D8 792 aa14.3□□□□□ -0.12
LRRC28-206ENST00000558471 TLK2Q86UE8 772 aa14.3□□□□□ -0.12
LRRC28-206ENST00000558471 REXO1Q8N1G1 1221 aaKnown RBP14.3□□□□□ -0.12
LRRC28-206ENST00000558471 RASGRP4Q8TDF6 673 aa14.3□□□□□ -0.12
LRRC28-206ENST00000558471 LLPHQ9BRT6 129 aaKnown RBP14.3□□□□□ -0.12
LRRC28-206ENST00000558471 ALG1Q9BT22 464 aa14.3□□□□□ -0.12
LRRC28-206ENST00000558471 ANO3Q9BYT9 981 aa14.3□□□□□ -0.12
LRRC28-206ENST00000558471 AP5M1Q9H0R1 490 aa14.3□□□□□ -0.12
LRRC28-206ENST00000558471 C11orf49Q9H6J7 331 aa14.3□□□□□ -0.12
LRRC28-206ENST00000558471 SPC25Q9HBM1 224 aa14.3□□□□□ -0.12
LRRC28-206ENST00000558471 KCNJ14Q9UNX9 436 aa14.3□□□□□ -0.12
LRRC28-206ENST00000558471 MRVI1Q9Y6F6 885 aa14.3□□□□□ -0.12
LRRC28-206ENST00000558471 DOCK5Q9H7D0 1870 aa14.29□□□□□ -0.12
LRRC28-206ENST00000558471 KBTBD13C9JR72 458 aa14.29□□□□□ -0.12
LRRC28-206ENST00000558471 NKRFO15226 690 aaKnown RBP eCLIP14.29□□□□□ -0.12
LRRC28-206ENST00000558471 STAM2O75886 525 aa14.29□□□□□ -0.12
LRRC28-206ENST00000558471 CST5P28325 142 aaPredicted RBP14.29□□□□□ -0.12
LRRC28-206ENST00000558471 MCM2P49736 904 aa14.29□□□□□ -0.12
LRRC28-206ENST00000558471 BEX3Q00994 111 aa14.29□□□□□ -0.12
LRRC28-206ENST00000558471 NPY5RQ15761 445 aa14.29□□□□□ -0.12
LRRC28-206ENST00000558471 KCNA10Q16322 511 aa14.29□□□□□ -0.12
LRRC28-206ENST00000558471 GNASQ5JWF2 1037 aa14.29□□□□□ -0.12
LRRC28-206ENST00000558471 FAM177A1Q8N128 213 aaPredicted RBP14.29□□□□□ -0.12
LRRC28-206ENST00000558471 BICD2Q8TD16 824 aa14.29□□□□□ -0.12
LRRC28-206ENST00000558471 WASF1Q92558 559 aa14.29□□□□□ -0.12
LRRC28-206ENST00000558471 TMX3Q96JJ7 454 aa14.29□□□□□ -0.12
LRRC28-206ENST00000558471 INPP4AQ96PE3 977 aaPredicted RBP14.29□□□□□ -0.12
LRRC28-206ENST00000558471 PHF20Q9BVI0 1012 aa14.29□□□□□ -0.12
LRRC28-206ENST00000558471 SENP6Q9GZR1 1112 aaPredicted RBP14.29□□□□□ -0.12
LRRC28-206ENST00000558471 EHMT1Q9H9B1 1298 aa14.29□□□□□ -0.12
LRRC28-206ENST00000558471 PCDHA4Q9UN74 947 aa14.29□□□□□ -0.12
LRRC28-206ENST00000558471 MKI67P46013 3256 aaKnown RBP14.29□□□□□ -0.12
LRRC28-206ENST00000558471 ALPK3Q96L96 1907 aa14.29□□□□□ -0.12
LRRC28-206ENST00000558471 SPATA31C2B4DYI2 1134 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 M0R2N6 131 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 XBP1P17861 261 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 ITGB5P18084 799 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 ICAM3P32942 547 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 SREBF1P36956 1147 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 SP2Q02086 613 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 SEMA3FQ13275 785 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 FSCN1Q16658 493 aaKnown RBP14.28□□□□□ -0.12
LRRC28-206ENST00000558471 GNPTABQ3T906 1256 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 MCTP2Q6DN12 878 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 GALNT17Q6IS24 598 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 KCNV1Q6PIU1 500 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 BLIDQ8IZY5 108 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 OR6J1Q8NGC5 347 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 CRYGNQ8WXF5 182 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 FERMT2Q96AC1 680 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 TSEN34Q9BSV6 310 aaKnown RBP14.28□□□□□ -0.12
LRRC28-206ENST00000558471 PHF24Q9UPV7 400 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 UBIAD1Q9Y5Z9 338 aa14.28□□□□□ -0.12
LRRC28-206ENST00000558471 GH1P01241 217 aa14.27□□□□□ -0.13
LRRC28-206ENST00000558471 ASGR1P07306 291 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms