RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 GPNMBQ14956 572 aa13.02□□□□□ -0.32
RABGGTA-204ENST00000558376 ALX1Q15699 326 aa13.02□□□□□ -0.32
RABGGTA-204ENST00000558376 AAK1Q2M2I8 961 aa13.02□□□□□ -0.32
RABGGTA-204ENST00000558376 RNF207Q6ZRF8 634 aa13.02□□□□□ -0.32
RABGGTA-204ENST00000558376 RETREG2Q8NC44 543 aa13.02□□□□□ -0.32
RABGGTA-204ENST00000558376 SLC9A7Q96T83 725 aa13.02□□□□□ -0.32
RABGGTA-204ENST00000558376 FTOQ9C0B1 505 aaKnown RBP eCLIP13.02□□□□□ -0.32
RABGGTA-204ENST00000558376 EPHX3Q9H6B9 360 aa13.02□□□□□ -0.32
RABGGTA-204ENST00000558376 FOXD4L1Q9NU39 408 aa13.02□□□□□ -0.32
RABGGTA-204ENST00000558376 PITPNM1O00562 1244 aa13.02□□□□□ -0.33
RABGGTA-204ENST00000558376 NKRFO15226 690 aaKnown RBP eCLIP13.02□□□□□ -0.33
RABGGTA-204ENST00000558376 KPNA6O60684 536 aa13.02□□□□□ -0.33
RABGGTA-204ENST00000558376 ARIH2O95376 493 aa13.02□□□□□ -0.33
RABGGTA-204ENST00000558376 RPS6P62753 249 aaKnown RBP13.02□□□□□ -0.33
RABGGTA-204ENST00000558376 PDE4DQ08499 809 aa13.02□□□□□ -0.33
RABGGTA-204ENST00000558376 GRB10Q13322 594 aa13.02□□□□□ -0.33
RABGGTA-204ENST00000558376 PPP2R5BQ15173 497 aa13.02□□□□□ -0.33
RABGGTA-204ENST00000558376 HSCBQ8IWL3 235 aa13.02□□□□□ -0.33
RABGGTA-204ENST00000558376 KCNB2Q92953 911 aa13.02□□□□□ -0.33
RABGGTA-204ENST00000558376 JAKMIP1Q96N16 626 aaKnown RBP13.02□□□□□ -0.33
RABGGTA-204ENST00000558376 CTAGE1Q96RT6 745 aa13.02□□□□□ -0.33
RABGGTA-204ENST00000558376 SLKQ9H2G2 1235 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-204ENST00000558376 LPXNO60711 386 aa13.01□□□□□ -0.33
RABGGTA-204ENST00000558376 CYP21A2P08686 494 aa13.01□□□□□ -0.33
RABGGTA-204ENST00000558376 PDHBP11177 359 aa13.01□□□□□ -0.33
RABGGTA-204ENST00000558376 PTPN11Q06124 597 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-204ENST00000558376 RRP12Q5JTH9 1297 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-204ENST00000558376 TICAM2Q86XR7 235 aa13.01□□□□□ -0.33
RABGGTA-204ENST00000558376 SCFD2Q8WU76 684 aa13.01□□□□□ -0.33
RABGGTA-204ENST00000558376 FAM122AQ96E09 287 aa13.01□□□□□ -0.33
RABGGTA-204ENST00000558376 C1QTNF1Q9BXJ1 281 aa13.01□□□□□ -0.33
RABGGTA-204ENST00000558376 TCP11L1Q9NUJ3 509 aa13.01□□□□□ -0.33
RABGGTA-204ENST00000558376 FGAP02671 866 aa13□□□□□ -0.33
RABGGTA-204ENST00000558376 TXNP10599 105 aaKnown RBP13□□□□□ -0.33
RABGGTA-204ENST00000558376 CASTP20810 708 aaKnown RBP13□□□□□ -0.33
RABGGTA-204ENST00000558376 CHMP4BP1P59074 171 aa13□□□□□ -0.33
RABGGTA-204ENST00000558376 ZNF543Q08ER8 600 aa13□□□□□ -0.33
RABGGTA-204ENST00000558376 BFSP2Q13515 415 aa13□□□□□ -0.33
RABGGTA-204ENST00000558376 BRDTQ58F21 947 aaPredicted RBP13□□□□□ -0.33
RABGGTA-204ENST00000558376 TMCO2Q7Z6W1 182 aaPredicted RBP13□□□□□ -0.33
RABGGTA-204ENST00000558376 TBC1D5Q92609 795 aa13□□□□□ -0.33
RABGGTA-204ENST00000558376 TCEANC2Q96MN5 208 aa13□□□□□ -0.33
RABGGTA-204ENST00000558376 TOMM22Q9NS69 142 aa13□□□□□ -0.33
RABGGTA-204ENST00000558376 COG5Q9UP83 839 aa13□□□□□ -0.33
RABGGTA-204ENST00000558376 MYH7BA7E2Y1 1941 aa13□□□□□ -0.33
RABGGTA-204ENST00000558376 KIAA1217Q5T5P2 1943 aa13□□□□□ -0.33
RABGGTA-204ENST00000558376 LCHNA4D1U4 455 aa12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 HAND2P61296 217 aa12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 TCTN1Q2MV58 587 aa12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 GDF6Q6KF10 455 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 CCDC62Q6P9F0 684 aa12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 DNERQ8NFT8 737 aa12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 AFG1LQ8WV93 481 aa12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 DHX38Q92620 1227 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 IL17RAQ96F46 866 aa12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 LRFN3Q9BTN0 628 aa12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 DSCC1Q9BVC3 393 aa12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 COL4A4P53420 1690 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 WDR19Q8NEZ3 1342 aa12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 KIF28PB7ZC32 967 aa12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 K7ELQ4 463 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 PTGISQ16647 500 aa12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 KAT2BQ92831 832 aa12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 KHSRPQ92945 711 aaKnown RBP eCLIP12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 CPVLQ9H3G5 476 aa12.99□□□□□ -0.33
RABGGTA-204ENST00000558376 ST18O60284 1047 aa12.98□□□□□ -0.33
RABGGTA-204ENST00000558376 SNHG28P0DPA3 235 aa12.98□□□□□ -0.33
RABGGTA-204ENST00000558376 WDR5P61964 334 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-204ENST00000558376 STOX1Q6ZVD7 989 aa12.98□□□□□ -0.33
RABGGTA-204ENST00000558376 HLA-CQ95604 372 aa12.98□□□□□ -0.33
RABGGTA-204ENST00000558376 TAAR1Q96RJ0 339 aa12.98□□□□□ -0.33
RABGGTA-204ENST00000558376 UBA5Q9GZZ9 404 aa12.98□□□□□ -0.33
RABGGTA-204ENST00000558376 NOD1Q9Y239 953 aa12.98□□□□□ -0.33
RABGGTA-204ENST00000558376 MYH6P13533 1939 aa12.98□□□□□ -0.33
RABGGTA-204ENST00000558376 BAIAP3O94812 1187 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 GOLGA8HP0CJ92 632 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 DEFB103AP81534 67 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 ARHGAP1Q07960 439 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 LY6KQ17RY6 165 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 USH1GQ495M9 461 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 RNF20Q5VTR2 975 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 RGS22Q8NE09 1264 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 ZSWIM6Q9HCJ5 1215 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 COL20A1Q9P218 1284 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 PNMA2Q9UL42 364 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 DTNBO60941 627 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 MMP3P08254 477 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 SELPP16109 830 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 KCNJ6P48051 423 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 SEPT14Q6ZU15 432 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 SESTD1Q86VW0 696 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 AFAP1L1Q8TED9 768 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 GDPD5Q8WTR4 605 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 TTC14Q96N46 770 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 MPHOSPH6Q99547 160 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 CD320Q9NPF0 282 aa12.97□□□□□ -0.33
RABGGTA-204ENST00000558376 NBNO60934 754 aa12.96□□□□□ -0.33
RABGGTA-204ENST00000558376 GH1P01241 217 aa12.96□□□□□ -0.33
RABGGTA-204ENST00000558376 AK2P54819 239 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms