RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 MUM1L1Q5H9M0 696 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 NACAP1Q9BZK3 213 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 HCSTQ9UBK5 93 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 MTUS1Q9ULD2 1270 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 CCPG1Q9ULG6 757 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 PRR12Q9ULL5 1215 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 INSL6Q9Y581 213 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 BRWD1Q9NSI6 2320 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 GREB1LQ9C091 1923 aaPredicted RBP6.13□□□□□ -1.43
SPG11-208ENST00000558155 SCN10AQ9Y5Y9 1956 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 PTPDC1A2A3K4 754 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 LCHNA4D1U4 455 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 LINC01553A4QN01 128 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 RNF113AO15541 343 aaKnown RBP6.13□□□□□ -1.43
SPG11-208ENST00000558155 NCK2O43639 380 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 CXCL10P02778 98 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 CHGBP05060 677 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 ICAM1P05362 532 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 TXNP10599 105 aaKnown RBP6.13□□□□□ -1.43
SPG11-208ENST00000558155 MS4A1P11836 297 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 RLBP1P12271 317 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 CASTP20810 708 aaKnown RBP6.13□□□□□ -1.43
SPG11-208ENST00000558155 SNAP25P60880 206 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 DEFB103AP81534 67 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 PKN1Q16512 942 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 FAM117BQ6P1L5 589 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 ADGRD1Q6QNK2 874 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 EP400NLQ6ZTU2 488 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 KCTD1Q719H9 257 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 LRRC8DQ7L1W4 858 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 SPRED2Q7Z698 418 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 SESTD1Q86VW0 696 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 IFNL3Q8IZI9 196 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 NEK9Q8TD19 979 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 SCFD2Q8WU76 684 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 APPBP2Q92624 585 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 CHMP4CQ96CF2 233 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 MRPL38Q96DV4 380 aaKnown RBP6.13□□□□□ -1.43
SPG11-208ENST00000558155 SAMD11Q96NU1 681 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 PURBQ96QR8 312 aaKnown RBP6.13□□□□□ -1.43
SPG11-208ENST00000558155 PRRX2Q99811 253 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 DDX49Q9Y6V7 483 aaKnown RBP6.13□□□□□ -1.43
SPG11-208ENST00000558155 LAMA2P24043 3122 aaKnown RBP6.13□□□□□ -1.43
SPG11-208ENST00000558155 MYH7P12883 1935 aa6.13□□□□□ -1.43
SPG11-208ENST00000558155 H3BQ06 376 aaPredicted RBP6.12□□□□□ -1.43
SPG11-208ENST00000558155 NBNO60934 754 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 AMHP03971 560 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 ZFYP08048 801 aaPredicted RBP6.12□□□□□ -1.43
SPG11-208ENST00000558155 CKBP12277 381 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 CALML3P27482 149 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 GPM6BQ13491 265 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 GPNMBQ14956 572 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 TIGD5Q53EQ6 642 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 RNF207Q6ZRF8 634 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 TMCO2Q7Z6W1 182 aaPredicted RBP6.12□□□□□ -1.43
SPG11-208ENST00000558155 ADHFE1Q8IWW8 467 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 C7orf31Q8N865 590 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 KBTBD3Q8NAB2 608 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 BANK1Q8NDB2 785 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 DNERQ8NFT8 737 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 PPP1R13LQ8WUF5 828 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 DCAF4Q8WV16 495 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 OSBP2Q969R2 916 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 PABPC5Q96DU9 382 aaKnown RBP6.12□□□□□ -1.43
SPG11-208ENST00000558155 POP1Q99575 1024 aaKnown RBP6.12□□□□□ -1.43
SPG11-208ENST00000558155 RANBP17Q9H2T7 1088 aaKnown RBP6.12□□□□□ -1.43
SPG11-208ENST00000558155 CHMP4BQ9H444 224 aaKnown RBP6.12□□□□□ -1.43
SPG11-208ENST00000558155 STX8Q9UNK0 236 aa6.12□□□□□ -1.43
SPG11-208ENST00000558155 MUC3AQ02505 3323 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 PLIN4Q96Q06 1357 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 TSPY2A6NKD2 308 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 H3BNC9 293 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 GPAA1O43292 621 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 HRO43593 1189 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 LGR5O75473 907 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 GH1P01241 217 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 PTPN5P54829 565 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 FOXK2Q01167 660 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 ZP2Q05996 745 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 RBL2Q08999 1139 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 PTK7Q13308 1070 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 DGKDQ16760 1214 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 CCDC96Q2M329 555 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 EPC2Q52LR7 807 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 SYDE2Q5VT97 1194 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 DMRTA1Q5VZB9 504 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 GDF6Q6KF10 455 aaPredicted RBP6.11□□□□□ -1.43
SPG11-208ENST00000558155 BTNL9Q6UXG8 535 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 HFE2Q6ZVN8 426 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 AFG1LQ8WV93 481 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 COPS5Q92905 334 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 C17orf80Q9BSJ5 609 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 KATNAL1Q9BW62 490 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 LRRCC1Q9C099 1032 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 NAPBQ9H115 298 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 IRF2BPLQ9H1B7 796 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 NSUN3Q9H649 340 aaKnown RBP6.11□□□□□ -1.43
SPG11-208ENST00000558155 ECHDC1Q9NTX5 307 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 MTMR7Q9Y216 660 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 PTPRSQ13332 1948 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms