RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 DDX41Q9UJV9 622 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 PCDHA11Q9Y5I1 949 aa15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 MYH6P13533 1939 aa15.79■□□□□ 0.12
SNRPA1-204ENST00000558020 MMP3P08254 477 aa15.79■□□□□ 0.12
SNRPA1-204ENST00000558020 CYP21A2P08686 494 aa15.79■□□□□ 0.12
SNRPA1-204ENST00000558020 IQCF3P0C7M6 154 aa15.79■□□□□ 0.12
SNRPA1-204ENST00000558020 TGFB3P10600 412 aa15.79■□□□□ 0.12
SNRPA1-204ENST00000558020 GHRHRQ02643 423 aa15.79■□□□□ 0.12
SNRPA1-204ENST00000558020 ARHGAP1Q07960 439 aa15.79■□□□□ 0.12
SNRPA1-204ENST00000558020 STOX1Q6ZVD7 989 aa15.79■□□□□ 0.12
SNRPA1-204ENST00000558020 SESTD1Q86VW0 696 aa15.79■□□□□ 0.12
SNRPA1-204ENST00000558020 DHX37Q8IY37 1157 aaKnown RBP15.79■□□□□ 0.12
SNRPA1-204ENST00000558020 C7orf31Q8N865 590 aa15.79■□□□□ 0.12
SNRPA1-204ENST00000558020 PRDM12Q9H4Q4 367 aa15.79■□□□□ 0.12
SNRPA1-204ENST00000558020 EYSQ5T1H1 3165 aa15.79■□□□□ 0.12
SNRPA1-204ENST00000558020 CDH23Q9H251 3354 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 PNMA6FA0A0J9YX94 578 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 KIF28PB7ZC32 967 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 E7EWF7 191 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 GCOM1H8Y6P7 765 aaPredicted RBP15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 PPFIA4O75335 1185 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 PARNO95453 639 aaKnown RBP15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 POLR2MP0CAP2 368 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 MYCLP12524 364 aaPredicted RBP15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 PTH1RQ03431 593 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 GRM4Q14833 912 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 TMEM67Q5HYA8 995 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 HOMER1Q86YM7 354 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 PPTC7Q8NI37 304 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 CAGE1Q8TC20 777 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 PHOSPHO2Q8TCD6 241 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 IL25Q9H293 177 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 NKX2-4Q9H2Z4 354 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 RIOX1Q9H6W3 641 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 PRUNE2Q8WUY3 3088 aa15.78■□□□□ 0.12
SNRPA1-204ENST00000558020 SCN10AQ9Y5Y9 1956 aa15.77■□□□□ 0.12
SNRPA1-204ENST00000558020 SGSM2O43147 1006 aa15.77■□□□□ 0.12
SNRPA1-204ENST00000558020 IGFBP4P22692 258 aa15.77■□□□□ 0.12
SNRPA1-204ENST00000558020 PPP2R2DQ66LE6 453 aa15.77■□□□□ 0.12
SNRPA1-204ENST00000558020 VSIG10LQ86VR7 867 aa15.77■□□□□ 0.12
SNRPA1-204ENST00000558020 TMTC2Q8N394 836 aa15.77■□□□□ 0.12
SNRPA1-204ENST00000558020 AFAP1L1Q8TED9 768 aa15.77■□□□□ 0.12
SNRPA1-204ENST00000558020 SLC9A7Q96T83 725 aa15.77■□□□□ 0.12
SNRPA1-204ENST00000558020 PDCD2LQ9BRP1 358 aa15.77■□□□□ 0.12
SNRPA1-204ENST00000558020 TSPYL2Q9H2G4 693 aaPredicted RBP15.77■□□□□ 0.12
SNRPA1-204ENST00000558020 BAIAP3O94812 1187 aa15.76■□□□□ 0.11
SNRPA1-204ENST00000558020 CCND2P30279 289 aa15.76■□□□□ 0.11
SNRPA1-204ENST00000558020 HOXA13P31271 388 aaPredicted RBP15.76■□□□□ 0.11
SNRPA1-204ENST00000558020 KIF5BP33176 963 aa15.76■□□□□ 0.11
SNRPA1-204ENST00000558020 RABGGTBP53611 331 aa15.76■□□□□ 0.11
SNRPA1-204ENST00000558020 TROAPQ12815 778 aa15.76■□□□□ 0.11
SNRPA1-204ENST00000558020 MAP4K1Q92918 833 aa15.76■□□□□ 0.11
SNRPA1-204ENST00000558020 PIGSQ96S52 555 aa15.76■□□□□ 0.11
SNRPA1-204ENST00000558020 MAP3K14Q99558 947 aa15.76■□□□□ 0.11
SNRPA1-204ENST00000558020 KIAA1217Q5T5P2 1943 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 OPLAHO14841 1288 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 PPP1R11O60927 126 aaPredicted RBP15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 STAM2O75886 525 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 SELPP16109 830 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 KCNJ6P48051 423 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 PSEN2P49810 448 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 PGM5Q15124 567 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 MYSM1Q5VVJ2 828 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 GDF6Q6KF10 455 aaPredicted RBP15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 CASC1Q6TDU7 716 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 FCHSD1Q86WN1 690 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 CTCFLQ8NI51 663 aaPredicted RBP15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 PPP1R13LQ8WUF5 828 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 PPM1EQ8WY54 764 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 KAT2BQ92831 832 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 SPATA33Q96N06 139 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 LZTS2Q9BRK4 669 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 MTA3Q9BTC8 594 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 MLXIPQ9HAP2 919 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 YBX2Q9Y2T7 364 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 MYO9BQ13459 2157 aa15.75■□□□□ 0.11
SNRPA1-204ENST00000558020 CHD9Q3L8U1 2897 aa15.74■□□□□ 0.11
SNRPA1-204ENST00000558020 SMARCA1P28370 1054 aa15.74■□□□□ 0.11
SNRPA1-204ENST00000558020 GNAQP50148 359 aa15.74■□□□□ 0.11
SNRPA1-204ENST00000558020 MFSD10Q14728 455 aa15.74■□□□□ 0.11
SNRPA1-204ENST00000558020 KIAA0753Q2KHM9 967 aa15.74■□□□□ 0.11
SNRPA1-204ENST00000558020 GNPTABQ3T906 1256 aa15.74■□□□□ 0.11
SNRPA1-204ENST00000558020 CELF3Q5SZQ8 465 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-204ENST00000558020 IGDCC4Q8TDY8 1250 aa15.74■□□□□ 0.11
SNRPA1-204ENST00000558020 ATXN2LQ8WWM7 1075 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-204ENST00000558020 VWCEQ96DN2 955 aa15.74■□□□□ 0.11
SNRPA1-204ENST00000558020 RRP36Q96EU6 259 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-204ENST00000558020 ALG1Q9BT22 464 aa15.74■□□□□ 0.11
SNRPA1-204ENST00000558020 HDAC6Q9UBN7 1215 aa15.74■□□□□ 0.11
SNRPA1-204ENST00000558020 GTF2IRD1Q9UHL9 959 aa15.74■□□□□ 0.11
SNRPA1-204ENST00000558020 GGPS1O95749 300 aa15.73■□□□□ 0.11
SNRPA1-204ENST00000558020 F2P00734 622 aa15.73■□□□□ 0.11
SNRPA1-204ENST00000558020 MCM5P33992 734 aa15.73■□□□□ 0.11
SNRPA1-204ENST00000558020 IRX6P78412 446 aaPredicted RBP15.73■□□□□ 0.11
SNRPA1-204ENST00000558020 PTK7Q13308 1070 aa15.73■□□□□ 0.11
SNRPA1-204ENST00000558020 TJAP1Q5JTD0 557 aa15.73■□□□□ 0.11
SNRPA1-204ENST00000558020 NFXL1Q6ZNB6 911 aa15.73■□□□□ 0.11
SNRPA1-204ENST00000558020 LRRC8DQ7L1W4 858 aa15.73■□□□□ 0.11
SNRPA1-204ENST00000558020 CUL5Q93034 780 aa15.73■□□□□ 0.11
SNRPA1-204ENST00000558020 SEC63Q9UGP8 760 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms