RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 FAM26EQ8N5C1 309 aa4.72□□□□□ -1.65
GPHN-216ENST00000557678 ADAMTS17Q8TE56 1095 aa4.72□□□□□ -1.65
GPHN-216ENST00000557678 SEC14L1Q92503 715 aa4.72□□□□□ -1.65
GPHN-216ENST00000557678 DPF3Q92784 378 aa4.72□□□□□ -1.65
GPHN-216ENST00000557678 DIO2Q92813 273 aa4.72□□□□□ -1.65
GPHN-216ENST00000557678 SYT3Q9BQG1 590 aa4.72□□□□□ -1.65
GPHN-216ENST00000557678 GORASP1Q9BQQ3 440 aa4.72□□□□□ -1.65
GPHN-216ENST00000557678 C11orf84Q9BUA3 381 aaPredicted RBP4.72□□□□□ -1.65
GPHN-216ENST00000557678 CYP26B1Q9NR63 512 aa4.72□□□□□ -1.65
GPHN-216ENST00000557678 SPATA6Q9NWH7 488 aaPredicted RBP4.72□□□□□ -1.65
GPHN-216ENST00000557678 ACTR10Q9NZ32 417 aa4.72□□□□□ -1.65
GPHN-216ENST00000557678 COA3Q9Y2R0 106 aaPredicted RBP4.72□□□□□ -1.65
GPHN-216ENST00000557678 TIMM13Q9Y5L4 95 aaPredicted RBP4.72□□□□□ -1.65
GPHN-216ENST00000557678 ZNF536O15090 1300 aa4.72□□□□□ -1.65
GPHN-216ENST00000557678 SMAD7O15105 426 aaKnown RBP4.71□□□□□ -1.66
GPHN-216ENST00000557678 SGSM2O43147 1006 aa4.71□□□□□ -1.66
GPHN-216ENST00000557678 DDAH1O94760 285 aa4.71□□□□□ -1.66
GPHN-216ENST00000557678 STAT5AP42229 794 aa4.71□□□□□ -1.66
GPHN-216ENST00000557678 NFKB2Q00653 900 aa4.71□□□□□ -1.66
GPHN-216ENST00000557678 EFEMP1Q12805 493 aa4.71□□□□□ -1.66
GPHN-216ENST00000557678 PUM1Q14671 1186 aaKnown RBP eCLIP4.71□□□□□ -1.66
GPHN-216ENST00000557678 RGL3Q3MIN7 710 aa4.71□□□□□ -1.66
GPHN-216ENST00000557678 MCTP2Q6DN12 878 aa4.71□□□□□ -1.66
GPHN-216ENST00000557678 IQCEQ6IPM2 695 aa4.71□□□□□ -1.66
GPHN-216ENST00000557678 HHIPL2Q6UWX4 724 aa4.71□□□□□ -1.66
GPHN-216ENST00000557678 FAM124AQ86V42 546 aa4.71□□□□□ -1.66
GPHN-216ENST00000557678 ZNF513Q8N8E2 541 aaPredicted RBP4.71□□□□□ -1.66
GPHN-216ENST00000557678 FRS2Q8WU20 508 aa4.71□□□□□ -1.66
GPHN-216ENST00000557678 TMEM169Q96HH4 297 aa4.71□□□□□ -1.66
GPHN-216ENST00000557678 LNPKQ9C0E8 428 aa4.71□□□□□ -1.66
GPHN-216ENST00000557678 NKX2-4Q9H2Z4 354 aa4.71□□□□□ -1.66
GPHN-216ENST00000557678 PCDH18Q9HCL0 1135 aa4.71□□□□□ -1.66
GPHN-216ENST00000557678 BCL6P41182 706 aa4.7□□□□□ -1.66
GPHN-216ENST00000557678 KIAA2012Q0VF49 1180 aa4.7□□□□□ -1.66
GPHN-216ENST00000557678 MROH9Q5TGP6 573 aa4.7□□□□□ -1.66
GPHN-216ENST00000557678 PRAMEF18Q5VWM3 479 aa4.7□□□□□ -1.66
GPHN-216ENST00000557678 BORAQ6PGQ7 559 aa4.7□□□□□ -1.66
GPHN-216ENST00000557678 TTLL6Q8N841 843 aa4.7□□□□□ -1.66
GPHN-216ENST00000557678 KYQ8NBH2 561 aa4.7□□□□□ -1.66
GPHN-216ENST00000557678 LOXL4Q96JB6 756 aa4.7□□□□□ -1.66
GPHN-216ENST00000557678 MRGPRX3Q96LB0 322 aa4.7□□□□□ -1.66
GPHN-216ENST00000557678 B2RBV5 119 aa4.69□□□□□ -1.66
GPHN-216ENST00000557678 DDX3XO00571 662 aaKnown RBP eCLIP4.69□□□□□ -1.66
GPHN-216ENST00000557678 TBX1O43435 398 aa4.69□□□□□ -1.66
GPHN-216ENST00000557678 ITGAVP06756 1048 aa4.69□□□□□ -1.66
GPHN-216ENST00000557678 ATF4P18848 351 aaPredicted RBP4.69□□□□□ -1.66
GPHN-216ENST00000557678 RPL13P26373 211 aaKnown RBP4.69□□□□□ -1.66
GPHN-216ENST00000557678 HOXC12P31275 282 aa4.69□□□□□ -1.66
GPHN-216ENST00000557678 THBS2P35442 1172 aa4.69□□□□□ -1.66
GPHN-216ENST00000557678 GTF2A2P52657 109 aa4.69□□□□□ -1.66
GPHN-216ENST00000557678 NKX3-2P78367 333 aa4.69□□□□□ -1.66
GPHN-216ENST00000557678 KCNAB2Q13303 367 aa4.69□□□□□ -1.66
GPHN-216ENST00000557678 PRSS53Q2L4Q9 553 aa4.69□□□□□ -1.66
GPHN-216ENST00000557678 TNNI3KQ59H18 835 aa4.69□□□□□ -1.66
GPHN-216ENST00000557678 E4F1Q66K89 784 aaPredicted RBP4.69□□□□□ -1.66
GPHN-216ENST00000557678 FAM178BQ8IXR5 827 aa4.69□□□□□ -1.66
GPHN-216ENST00000557678 PPIL6Q8IXY8 311 aa4.69□□□□□ -1.66
GPHN-216ENST00000557678 NPLOC4Q8TAT6 608 aa4.69□□□□□ -1.66
GPHN-216ENST00000557678 SMPD4Q9NXE4 827 aa4.69□□□□□ -1.66
GPHN-216ENST00000557678 KIAA1522Q9P206 1035 aaPredicted RBP4.69□□□□□ -1.66
GPHN-216ENST00000557678 TMEFF2Q9UIK5 374 aaPredicted RBP4.69□□□□□ -1.66
GPHN-216ENST00000557678 PCDHA2Q9Y5H9 948 aa4.69□□□□□ -1.66
GPHN-216ENST00000557678 MROH6A6NGR9 719 aa4.68□□□□□ -1.66
GPHN-216ENST00000557678 CYP1A1P04798 512 aaPredicted RBP4.68□□□□□ -1.66
GPHN-216ENST00000557678 ERCC5P28715 1186 aaPredicted RBP4.68□□□□□ -1.66
GPHN-216ENST00000557678 SLC6A11P48066 632 aa4.68□□□□□ -1.66
GPHN-216ENST00000557678 ITGA1P56199 1179 aa4.68□□□□□ -1.66
GPHN-216ENST00000557678 GNL2Q13823 731 aaKnown RBP4.68□□□□□ -1.66
GPHN-216ENST00000557678 CHRNA2Q15822 529 aa4.68□□□□□ -1.66
GPHN-216ENST00000557678 ZNF227Q86WZ6 799 aa4.68□□□□□ -1.66
GPHN-216ENST00000557678 FAM126BQ8IXS8 530 aa4.68□□□□□ -1.66
GPHN-216ENST00000557678 LGI4Q8N135 537 aa4.68□□□□□ -1.66
GPHN-216ENST00000557678 LINC00482Q8N8I6 264 aa4.68□□□□□ -1.66
GPHN-216ENST00000557678 CHST13Q8NET6 341 aa4.68□□□□□ -1.66
GPHN-216ENST00000557678 ZSWIM3Q96MP5 696 aa4.68□□□□□ -1.66
GPHN-216ENST00000557678 NGRNQ9NPE2 291 aaKnown RBP4.68□□□□□ -1.66
GPHN-216ENST00000557678 CNOT11Q9UKZ1 510 aaKnown RBP4.68□□□□□ -1.66
GPHN-216ENST00000557678 R3HCC1Q9Y3T6 440 aaKnown RBP4.68□□□□□ -1.66
GPHN-216ENST00000557678 AGRPO00253 132 aa4.67□□□□□ -1.66
GPHN-216ENST00000557678 SUSD5O60279 629 aa4.67□□□□□ -1.66
GPHN-216ENST00000557678 CPP00450 1065 aa4.67□□□□□ -1.66
GPHN-216ENST00000557678 ITGB3P05106 788 aa4.67□□□□□ -1.66
GPHN-216ENST00000557678 MAGEA10P43363 369 aaPredicted RBP4.67□□□□□ -1.66
GPHN-216ENST00000557678 SF1Q15637 639 aaKnown RBP4.67□□□□□ -1.66
GPHN-216ENST00000557678 FXNQ16595 210 aa4.67□□□□□ -1.66
GPHN-216ENST00000557678 GLB1LQ6UWU2 654 aa4.67□□□□□ -1.66
GPHN-216ENST00000557678 MIB1Q86YT6 1006 aa4.67□□□□□ -1.66
GPHN-216ENST00000557678 CCDC103Q8IW40 242 aa4.67□□□□□ -1.66
GPHN-216ENST00000557678 TXNDC5Q8NBS9 432 aaKnown RBP4.67□□□□□ -1.66
GPHN-216ENST00000557678 LCORQ96JN0 433 aaPredicted RBP4.67□□□□□ -1.66
GPHN-216ENST00000557678 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.67□□□□□ -1.66
GPHN-216ENST00000557678 TMPRSS5Q9H3S3 457 aa4.67□□□□□ -1.66
GPHN-216ENST00000557678 L2HGDHQ9H9P8 463 aa4.67□□□□□ -1.66
GPHN-216ENST00000557678 CLDND1Q9NY35 253 aa4.67□□□□□ -1.66
GPHN-216ENST00000557678 CROTQ9UKG9 612 aa4.67□□□□□ -1.66
GPHN-216ENST00000557678 INVSQ9Y283 1065 aa4.67□□□□□ -1.66
GPHN-216ENST00000557678 PCDHB4Q9Y5E5 795 aa4.67□□□□□ -1.66
GPHN-216ENST00000557678 UNCXA6NJT0 531 aa4.66□□□□□ -1.66
GPHN-216ENST00000557678 HGSO14964 777 aaPredicted RBP4.66□□□□□ -1.66
GPHN-216ENST00000557678 DGKIO75912 1065 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms