RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CHD7Q9P2D1 2997 aa19.34■□□□□ 0.69
NEK9-211ENST00000557673 LCTP09848 1927 aa19.33■□□□□ 0.69
NEK9-211ENST00000557673 CA3P07451 260 aa19.33■□□□□ 0.68
NEK9-211ENST00000557673 TXNP10599 105 aaKnown RBP19.33■□□□□ 0.68
NEK9-211ENST00000557673 POU3F3P20264 500 aaPredicted RBP19.33■□□□□ 0.68
NEK9-211ENST00000557673 EDNRBP24530 442 aa19.33■□□□□ 0.68
NEK9-211ENST00000557673 TRDNQ13061 729 aa19.33■□□□□ 0.68
NEK9-211ENST00000557673 SKIV2LQ15477 1246 aaKnown RBP19.33■□□□□ 0.68
NEK9-211ENST00000557673 GPATCH4Q5T3I0 446 aaKnown RBP19.33■□□□□ 0.68
NEK9-211ENST00000557673 CYB5R4Q7L1T6 521 aa19.33■□□□□ 0.68
NEK9-211ENST00000557673 MB21D2Q8IYB1 491 aaPredicted RBP19.33■□□□□ 0.68
NEK9-211ENST00000557673 CCDC155Q8N6L0 562 aa19.33■□□□□ 0.68
NEK9-211ENST00000557673 RGS22Q8NE09 1264 aa19.33■□□□□ 0.68
NEK9-211ENST00000557673 NCOA7Q8NI08 942 aa19.33■□□□□ 0.68
NEK9-211ENST00000557673 KCNB2Q92953 911 aa19.33■□□□□ 0.68
NEK9-211ENST00000557673 UBAC1Q9BSL1 405 aa19.33■□□□□ 0.68
NEK9-211ENST00000557673 FTOQ9C0B1 505 aaKnown RBP eCLIP19.33■□□□□ 0.68
NEK9-211ENST00000557673 IQCF3P0C7M6 154 aa19.32■□□□□ 0.68
NEK9-211ENST00000557673 RASEFQ8IZ41 740 aa19.32■□□□□ 0.68
NEK9-211ENST00000557673 USP26Q9BXU7 913 aa19.32■□□□□ 0.68
NEK9-211ENST00000557673 BDP1A6H8Y1 2624 aa19.32■□□□□ 0.68
NEK9-211ENST00000557673 BAIAP3O94812 1187 aa19.31■□□□□ 0.68
NEK9-211ENST00000557673 TSGA10IPQ3SY00 556 aa19.31■□□□□ 0.68
NEK9-211ENST00000557673 UBA5Q9GZZ9 404 aa19.31■□□□□ 0.68
NEK9-211ENST00000557673 GBF1Q92538 1859 aa19.31■□□□□ 0.68
NEK9-211ENST00000557673 EIF5BO60841 1220 aaKnown RBP19.3■□□□□ 0.68
NEK9-211ENST00000557673 BMP1P13497 986 aa19.3■□□□□ 0.68
NEK9-211ENST00000557673 ANTXR2P58335 489 aa19.3■□□□□ 0.68
NEK9-211ENST00000557673 COL9A3Q14050 684 aaPredicted RBP19.3■□□□□ 0.68
NEK9-211ENST00000557673 SEC23AQ15436 765 aa19.3■□□□□ 0.68
NEK9-211ENST00000557673 IFIT1BQ5T764 474 aaKnown RBP19.3■□□□□ 0.68
NEK9-211ENST00000557673 HERC6Q8IVU3 1022 aa19.3■□□□□ 0.68
NEK9-211ENST00000557673 CAGE1Q8TC20 777 aa19.3■□□□□ 0.68
NEK9-211ENST00000557673 C1QTNF1Q9BXJ1 281 aa19.3■□□□□ 0.68
NEK9-211ENST00000557673 COG5Q9UP83 839 aa19.3■□□□□ 0.68
NEK9-211ENST00000557673 MTCH2Q9Y6C9 303 aa19.3■□□□□ 0.68
NEK9-211ENST00000557673 PARNO95453 639 aaKnown RBP19.29■□□□□ 0.68
NEK9-211ENST00000557673 KCNJ6P48051 423 aa19.29■□□□□ 0.68
NEK9-211ENST00000557673 KRT32Q14532 448 aa19.29■□□□□ 0.68
NEK9-211ENST00000557673 PTGISQ16647 500 aa19.29■□□□□ 0.68
NEK9-211ENST00000557673 ASPRV1Q53RT3 343 aa19.29■□□□□ 0.68
NEK9-211ENST00000557673 SNX14Q9Y5W7 946 aa19.29■□□□□ 0.68
NEK9-211ENST00000557673 SCN10AQ9Y5Y9 1956 aa19.29■□□□□ 0.68
NEK9-211ENST00000557673 SEC24BO95487 1268 aa19.28■□□□□ 0.68
NEK9-211ENST00000557673 PARP1P09874 1014 aaKnown RBP19.28■□□□□ 0.68
NEK9-211ENST00000557673 ADCK5Q3MIX3 580 aa19.28■□□□□ 0.68
NEK9-211ENST00000557673 USH1GQ495M9 461 aa19.28■□□□□ 0.68
NEK9-211ENST00000557673 NSUN6Q8TEA1 469 aaKnown RBP19.28■□□□□ 0.68
NEK9-211ENST00000557673 AFAP1L1Q8TED9 768 aa19.28■□□□□ 0.68
NEK9-211ENST00000557673 COPS5Q92905 334 aa19.28■□□□□ 0.68
NEK9-211ENST00000557673 TRANK1O15050 2925 aa19.27■□□□□ 0.68
NEK9-211ENST00000557673 TLL1O43897 1013 aa19.27■□□□□ 0.68
NEK9-211ENST00000557673 GH1P01241 217 aa19.27■□□□□ 0.68
NEK9-211ENST00000557673 CASTP20810 708 aaKnown RBP19.27■□□□□ 0.68
NEK9-211ENST00000557673 CHMP4BP1P59074 171 aa19.27■□□□□ 0.68
NEK9-211ENST00000557673 TFF2Q03403 129 aa19.27■□□□□ 0.68
NEK9-211ENST00000557673 TAP1Q03518 808 aa19.27■□□□□ 0.68
NEK9-211ENST00000557673 CDC37Q16543 378 aaPredicted RBP19.27■□□□□ 0.68
NEK9-211ENST00000557673 CHST3Q7LGC8 479 aa19.27■□□□□ 0.68
NEK9-211ENST00000557673 SESTD1Q86VW0 696 aa19.27■□□□□ 0.68
NEK9-211ENST00000557673 MCF2L2Q86YR7 1114 aa19.27■□□□□ 0.68
NEK9-211ENST00000557673 ADGRF4Q8IZF3 695 aa19.27■□□□□ 0.68
NEK9-211ENST00000557673 ARNTL2Q8WYA1 636 aa19.27■□□□□ 0.68
NEK9-211ENST00000557673 IWS1Q96ST2 819 aa19.27■□□□□ 0.68
NEK9-211ENST00000557673 CERS4Q9HA82 394 aa19.27■□□□□ 0.68
NEK9-211ENST00000557673 ABCB11O95342 1321 aa19.26■□□□□ 0.67
NEK9-211ENST00000557673 RFXAPO00287 272 aa19.26■□□□□ 0.67
NEK9-211ENST00000557673 IFIT3O14879 490 aaKnown RBP19.26■□□□□ 0.67
NEK9-211ENST00000557673 PRC1O43663 620 aa19.26■□□□□ 0.67
NEK9-211ENST00000557673 DHX16O60231 1041 aaKnown RBP19.26■□□□□ 0.67
NEK9-211ENST00000557673 MCM5P33992 734 aa19.26■□□□□ 0.67
NEK9-211ENST00000557673 STXBP2Q15833 593 aa19.26■□□□□ 0.67
NEK9-211ENST00000557673 CCDC62Q6P9F0 684 aa19.26■□□□□ 0.67
NEK9-211ENST00000557673 AFG1LQ8WV93 481 aa19.26■□□□□ 0.67
NEK9-211ENST00000557673 NEK1Q96PY6 1258 aa19.26■□□□□ 0.67
NEK9-211ENST00000557673 SENP2Q9HC62 589 aa19.26■□□□□ 0.67
NEK9-211ENST00000557673 MYH6P13533 1939 aa19.25■□□□□ 0.67
NEK9-211ENST00000557673 SELPP16109 830 aa19.25■□□□□ 0.67
NEK9-211ENST00000557673 SART3Q15020 963 aaKnown RBP19.25■□□□□ 0.67
NEK9-211ENST00000557673 DGKDQ16760 1214 aa19.25■□□□□ 0.67
NEK9-211ENST00000557673 SEPT14Q6ZU15 432 aa19.25■□□□□ 0.67
NEK9-211ENST00000557673 STAG2Q8N3U4 1231 aa19.25■□□□□ 0.67
NEK9-211ENST00000557673 HLA-CQ95604 372 aa19.25■□□□□ 0.67
NEK9-211ENST00000557673 JAKMIP1Q96N16 626 aaKnown RBP19.25■□□□□ 0.67
NEK9-211ENST00000557673 MTA3Q9BTC8 594 aa19.25■□□□□ 0.67
NEK9-211ENST00000557673 ZBED2Q9BTP6 218 aa19.25■□□□□ 0.67
NEK9-211ENST00000557673 VAT1LQ9HCJ6 419 aa19.25■□□□□ 0.67
NEK9-211ENST00000557673 PRRC2BQ5JSZ5 2229 aaKnown RBP19.25■□□□□ 0.67
NEK9-211ENST00000557673 ARIH2O95376 493 aa19.24■□□□□ 0.67
NEK9-211ENST00000557673 MMP3P08254 477 aa19.24■□□□□ 0.67
NEK9-211ENST00000557673 KCNQ1P51787 676 aa19.24■□□□□ 0.67
NEK9-211ENST00000557673 LY6KQ17RY6 165 aa19.24■□□□□ 0.67
NEK9-211ENST00000557673 QRICH1Q2TAL8 776 aa19.24■□□□□ 0.67
NEK9-211ENST00000557673 PPP1R13LQ8WUF5 828 aa19.24■□□□□ 0.67
NEK9-211ENST00000557673 RMDN3Q96TC7 470 aa19.24■□□□□ 0.67
NEK9-211ENST00000557673 KATNAL1Q9BW62 490 aa19.24■□□□□ 0.67
NEK9-211ENST00000557673 JMJD4Q9H9V9 463 aa19.24■□□□□ 0.67
NEK9-211ENST00000557673 MRPL11Q9Y3B7 192 aaKnown RBP19.24■□□□□ 0.67
NEK9-211ENST00000557673 SCN5AQ14524 2016 aa19.24■□□□□ 0.67
NEK9-211ENST00000557673 ERICH2A1L162 156 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms