RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 GLI1P08151 1106 aa12.62□□□□□ -0.39
SRP54-213ENST00000556994 PRLRP16471 622 aa12.62□□□□□ -0.39
SRP54-213ENST00000556994 CARSP49589 748 aaKnown RBP12.62□□□□□ -0.39
SRP54-213ENST00000556994 PPARDQ03181 441 aa12.62□□□□□ -0.39
SRP54-213ENST00000556994 PDCLQ13371 301 aa12.62□□□□□ -0.39
SRP54-213ENST00000556994 ENOX2Q16206 610 aaKnown RBP12.62□□□□□ -0.39
SRP54-213ENST00000556994 GRIK5Q16478 980 aa12.62□□□□□ -0.39
SRP54-213ENST00000556994 KCTD19Q17RG1 926 aaPredicted RBP12.62□□□□□ -0.39
SRP54-213ENST00000556994 GALNT17Q6IS24 598 aa12.62□□□□□ -0.39
SRP54-213ENST00000556994 ZNF572Q7Z3I7 529 aaPredicted RBP12.62□□□□□ -0.39
SRP54-213ENST00000556994 BAP1Q92560 729 aa12.62□□□□□ -0.39
SRP54-213ENST00000556994 SH3GL2Q99962 352 aa12.62□□□□□ -0.39
SRP54-213ENST00000556994 KANSL2Q9H9L4 492 aa12.62□□□□□ -0.39
SRP54-213ENST00000556994 MAGEF1Q9HAY2 307 aa12.62□□□□□ -0.39
SRP54-213ENST00000556994 NFU1Q9UMS0 254 aa12.62□□□□□ -0.39
SRP54-213ENST00000556994 KIAA1551Q9HCM1 1747 aa12.62□□□□□ -0.39
SRP54-213ENST00000556994 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 LAMB1P07942 1786 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 A0A087WUV0 522 aaPredicted RBP12.61□□□□□ -0.39
SRP54-213ENST00000556994 OPA1O60313 960 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 HSF2BPO75031 334 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 GTF2A1P52655 376 aaPredicted RBP12.61□□□□□ -0.39
SRP54-213ENST00000556994 MAN2A1Q16706 1144 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 ICE2Q659A1 982 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 KRT25Q7Z3Z0 450 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 MAPKAPK5Q8IW41 473 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 NUDT12Q9BQG2 462 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 UBA5Q9GZZ9 404 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 PACSIN2Q9UNF0 486 aaPredicted RBP12.61□□□□□ -0.39
SRP54-213ENST00000556994 CASZ1Q86V15 1759 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 POTEMA6NI47 508 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 LCA5LO95447 670 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 FTCDO95954 541 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 GUCY2FP51841 1108 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 GUCY2DQ02846 1103 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 ITIH3Q06033 890 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 KCNMA1Q12791 1236 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 SEMA3FQ13275 785 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 TRADDQ15628 312 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 TBC1D9BQ66K14 1250 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 HGSNATQ68CP4 663 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 ANKS1AQ92625 1134 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 CCDC43Q96MW1 224 aaKnown RBP12.61□□□□□ -0.39
SRP54-213ENST00000556994 PNMA5Q96PV4 448 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 UIMC1Q96RL1 719 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 PIGSQ96S52 555 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 EPB41L5Q9HCM4 733 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 C6orf50Q9HD87 102 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 ZNF335Q9H4Z2 1342 aaPredicted RBP12.61□□□□□ -0.39
SRP54-213ENST00000556994 DOT1LQ8TEK3 1739 aa12.61□□□□□ -0.39
SRP54-213ENST00000556994 KCNQ2O43526 872 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 ZEB2O60315 1214 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 ARID5AQ03989 594 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 PDXDC1Q6P996 788 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 KCNK18Q7Z418 384 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 CCDC84Q86UT8 332 aaPredicted RBP12.6□□□□□ -0.39
SRP54-213ENST00000556994 LARP4BQ92615 738 aaKnown RBP12.6□□□□□ -0.39
SRP54-213ENST00000556994 KAT2BQ92831 832 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 GJA10Q969M2 543 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 CDK5RAP3Q96JB5 506 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 NOX5Q96PH1 765 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 SHTN1A0MZ66 631 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 SLC37A4O43826 429 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 ERLIN2O94905 339 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 RASA1P20936 1047 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 NNTQ13423 1086 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 DDB1Q16531 1140 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 ASTE1Q2TB18 679 aaPredicted RBP12.6□□□□□ -0.39
SRP54-213ENST00000556994 SOGA3Q5TF21 947 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 EMBQ6PCB8 327 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 UNC13DQ70J99 1090 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 TBC1D7Q9P0N9 293 aa12.6□□□□□ -0.39
SRP54-213ENST00000556994 RREB1Q92766 1687 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 PJA2O43164 708 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 PALMO75781 387 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 HEXIM1O94992 359 aaKnown RBP12.59□□□□□ -0.39
SRP54-213ENST00000556994 TDP2O95551 362 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 GNA11P29992 359 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 PPP1R2P41236 205 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 CALCRLQ16602 461 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 CFAP221Q4G0U5 840 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 FBXW10Q5XX13 1052 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 ALS2CLQ60I27 953 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 LRRC55Q6ZSA7 311 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 DDX12PQ92771 950 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 ZNF233A6NK53 670 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 TLR2O60603 784 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 LDHBP07195 334 aaKnown RBP12.59□□□□□ -0.39
SRP54-213ENST00000556994 GBP6Q6ZN66 633 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 GUF1Q8N442 669 aaKnown RBP12.59□□□□□ -0.39
SRP54-213ENST00000556994 MARCH10Q8NA82 808 aaPredicted RBP12.59□□□□□ -0.39
SRP54-213ENST00000556994 COL22A1Q8NFW1 1626 aaPredicted RBP12.59□□□□□ -0.39
SRP54-213ENST00000556994 CAVIN3Q969G5 261 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 COA7Q96BR5 231 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 GPR101Q96P66 508 aaPredicted RBP12.59□□□□□ -0.39
SRP54-213ENST00000556994 KRT12Q99456 494 aa12.59□□□□□ -0.39
SRP54-213ENST00000556994 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.59□□□□□ -0.39
SRP54-213ENST00000556994 LAMB2P55268 1798 aa12.58□□□□□ -0.4
SRP54-213ENST00000556994 NDUFAB1O14561 156 aa12.58□□□□□ -0.4
SRP54-213ENST00000556994 CPP00450 1065 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms