RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 RUFY3Q7L099 469 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 CCDC84Q86UT8 332 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-244ENST00000556898 CLEC10AQ8IUN9 316 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 TPCN2Q8NHX9 752 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 NCOA7Q8NI08 942 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 CHMP4CQ96CF2 233 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 WNK4Q96J92 1243 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 DEFB129Q9H1M3 183 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 SEMA6BQ9H3T3 888 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 PDRG1Q9NUG6 133 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 LAMB1P07942 1786 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 LAMA4Q16363 1823 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 FOCADQ5VW36 1801 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 ECM29Q5VYK3 1845 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 ATRNL1Q5VV63 1379 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 ROBO3Q96MS0 1386 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 ORC4O43929 436 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 HLA-DOAP06340 250 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 IREB2P48200 963 aaKnown RBP6.23□□□□□ -1.41
ATXN3-244ENST00000556898 TFAP4Q01664 338 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 APOBRQ0VD83 1088 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 ST3GAL1Q11201 340 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 KRT32Q14532 448 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 SLC9C1Q4G0N8 1177 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 ARSJQ5FYB0 599 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-244ENST00000556898 C16orf86Q6ZW13 317 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 DHX32Q7L7V1 743 aaKnown RBP6.23□□□□□ -1.41
ATXN3-244ENST00000556898 RASGRP2Q7LDG7 609 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 RALYLQ86SE5 291 aaKnown RBP6.23□□□□□ -1.41
ATXN3-244ENST00000556898 TTC6Q86TZ1 520 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 CERS3Q8IU89 383 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 CRACR2BQ8N4Y2 399 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-244ENST00000556898 DPF3Q92784 378 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 PLVAPQ9BX97 442 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 KRTAP9-2Q9BYQ4 174 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 TM6SF1Q9BZW5 370 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 MKNK2Q9HBH9 465 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 IL17RBQ9NRM6 502 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 ZNF358Q9NW07 568 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 ZSWIM5Q9P217 1185 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 BRPF3Q9ULD4 1205 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 PPP2R3BQ9Y5P8 575 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 CYP46A1Q9Y6A2 500 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 PAPPA2Q9BXP8 1791 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 SSC5DA1L4H1 1573 aa6.23□□□□□ -1.41
ATXN3-244ENST00000556898 MPHOSPH10O00566 681 aaKnown RBP6.22□□□□□ -1.41
ATXN3-244ENST00000556898 SH2B2O14492 632 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-244ENST00000556898 CDK2AP1O14519 115 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 IFIT3O14879 490 aaKnown RBP6.22□□□□□ -1.41
ATXN3-244ENST00000556898 USP2O75604 605 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-244ENST00000556898 RXRAP19793 462 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 PSMA5P28066 241 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 GUCY1A2P33402 732 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 MCM5P33992 734 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 TNNI2P48788 182 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 EPHA4P54764 986 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 PDE4BQ07343 736 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 TRDNQ13061 729 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 STK3Q13188 491 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 ME3Q16798 604 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 FKBP1CQ5VVH2 108 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 TATDN1Q6P1N9 297 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 FAM83AQ86UY5 434 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 ANKMY2Q8IV38 441 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 AMOTL1Q8IY63 956 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 ANKRD13AQ8IZ07 590 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 ZNF444Q8N0Y2 327 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-244ENST00000556898 NECAB1Q8N987 351 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 IGDCC4Q8TDY8 1250 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 BRF1Q92994 677 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 CLMNQ96JQ2 1002 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 PSMG3-AS1Q96PY0 264 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 PTPN18Q99952 460 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 MYL10Q9BUA6 226 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 KRT23Q9C075 422 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 EHD4Q9H223 541 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 RNF41Q9H4P4 317 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-244ENST00000556898 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.22□□□□□ -1.41
ATXN3-244ENST00000556898 ZFYVE28Q9HCC9 887 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 NOP53Q9NZM5 478 aaKnown RBP6.22□□□□□ -1.41
ATXN3-244ENST00000556898 PI4KBQ9UBF8 816 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 SERPINB13Q9UIV8 391 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 ZMIZ1Q9ULJ6 1067 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 TPCN1Q9ULQ1 816 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 PTCH2Q9Y6C5 1203 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 MYH1P12882 1939 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 TNKSO95271 1327 aa6.22□□□□□ -1.41
ATXN3-244ENST00000556898 IGKV6D-41A0A0C4DH26 115 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 KLF18A0A0U1RQI7 1052 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 A6NJY4 79 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 TSPY2A6NKD2 308 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 PIK3R2O00459 728 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 SLC3A2P08195 630 aaKnown RBP6.21□□□□□ -1.42
ATXN3-244ENST00000556898 TSPY3P0CV98 308 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 TSPY8P0CW00 308 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 INPP5BP32019 993 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 ANP32AP39687 249 aaKnown RBP6.21□□□□□ -1.42
ATXN3-244ENST00000556898 TXLNAP40222 546 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 PRMT2P55345 433 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 CCT2P78371 535 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms