RNA–Protein interactions for RNA: ENST00000556074.5

NEMF-209, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 3,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-209ENST00000556074 SQORQ9Y6N5 450 aa8.12□□□□□ -1.11
NEMF-209ENST00000556074 CCDC196A0A1B0GTZ2 297 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 A6NLC8 198 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 POU2F2P09086 479 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 HSPA5P11021 654 aaKnown RBP8.11□□□□□ -1.11
NEMF-209ENST00000556074 ACTN2P35609 894 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 IFIT5Q13325 482 aaKnown RBP8.11□□□□□ -1.11
NEMF-209ENST00000556074 AHI1Q8N157 1196 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 OR6P1Q8NGX9 317 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 UTP15Q8TED0 518 aaKnown RBP8.11□□□□□ -1.11
NEMF-209ENST00000556074 USP6NLQ92738 828 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 PAPOLBQ9NRJ5 636 aaKnown RBP8.11□□□□□ -1.11
NEMF-209ENST00000556074 CPSF2Q9P2I0 782 aaKnown RBP8.11□□□□□ -1.11
NEMF-209ENST00000556074 AASSQ9UDR5 926 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 FAM184BQ9ULE4 1060 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 KNSTRNQ9Y448 316 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 PCDHB11Q9Y5F2 797 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 A0A087WV62 115 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 SLC7A4O43246 635 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 CKMT1AP12532 417 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 IL1RL1Q01638 556 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 PKDCCQ504Y2 493 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 MUM1L1Q5H9M0 696 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 DNTTIP2Q5QJE6 756 aaKnown RBP8.11□□□□□ -1.11
NEMF-209ENST00000556074 FAM117BQ6P1L5 589 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 BEND5Q7L4P6 421 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 ZBTB34Q8NCN2 500 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 ZDHHC16Q969W1 377 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 RTEL1Q9NZ71 1219 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 GOSR1O95249 250 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 PAPLNO95428 1278 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 VEGFAP15692 232 aaPredicted RBP8.11□□□□□ -1.11
NEMF-209ENST00000556074 CCNCP24863 283 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 GUCY2CP25092 1073 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 SMAD4Q13485 552 aaKnown RBP8.11□□□□□ -1.11
NEMF-209ENST00000556074 PDE3AQ14432 1141 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 FERMT2Q96AC1 680 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 KIF1BPQ96EK5 621 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 MYO19Q96H55 970 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 FAM81BQ96LP2 452 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 SLF1Q9BQI6 1058 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 MENTQ9BUN1 341 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 ACAD9Q9H845 621 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 ZNRF3Q9ULT6 936 aa8.11□□□□□ -1.11
NEMF-209ENST00000556074 A0A1W2PQH9 124 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 DOK2O60496 412 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 ZBED1O96006 694 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 TPM3P06753 285 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 THEGLP0DJG4 465 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 RPS2P15880 293 aaKnown RBP8.1□□□□□ -1.11
NEMF-209ENST00000556074 PRIM2P49643 509 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 MXI1P50539 228 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 CLCN2P51788 898 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 RBM5P52756 815 aaKnown RBP eCLIP8.1□□□□□ -1.11
NEMF-209ENST00000556074 GRM2Q14416 872 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 TTC39AQ5SRH9 613 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 LIN54Q6MZP7 749 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 SLC30A6Q6NXT4 461 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 ALKBH5Q6P6C2 394 aaKnown RBP8.1□□□□□ -1.11
NEMF-209ENST00000556074 MAML1Q92585 1016 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 ACO2Q99798 780 aaKnown RBP8.1□□□□□ -1.11
NEMF-209ENST00000556074 SIL1Q9H173 461 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 NUCKS1Q9H1E3 243 aaKnown RBP8.1□□□□□ -1.11
NEMF-209ENST00000556074 NSMCE4AQ9NXX6 385 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 POLR3DP05423 398 aaPredicted RBP8.1□□□□□ -1.11
NEMF-209ENST00000556074 DRG2P55039 364 aaKnown RBP8.1□□□□□ -1.11
NEMF-209ENST00000556074 TAF5Q15542 800 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 ANO4Q32M45 955 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 ANKDD1AQ495B1 522 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 IFIT1BQ5T764 474 aaKnown RBP8.1□□□□□ -1.11
NEMF-209ENST00000556074 ANKRD24Q8TF21 1146 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 ZWILCHQ9H900 591 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 TRIM39Q9HCM9 518 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 MARK1Q9P0L2 795 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 HECAQ9UBI9 543 aaPredicted RBP8.1□□□□□ -1.11
NEMF-209ENST00000556074 SH3BGRL2Q9UJC5 107 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 COG5Q9UP83 839 aa8.1□□□□□ -1.11
NEMF-209ENST00000556074 HMGXB3Q12766 1538 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 PCDHGA12O60330 932 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 DHRS4L1P0CG22 281 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 GSTT1P30711 240 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 FXR2P51116 673 aaKnown RBP eCLIP8.09□□□□□ -1.115e-6■□□□□ 8.9
NEMF-209ENST00000556074 PMS1P54277 932 aaKnown RBP8.09□□□□□ -1.11
NEMF-209ENST00000556074 RRP1P56182 461 aaKnown RBP8.09□□□□□ -1.11
NEMF-209ENST00000556074 CYP4A11Q02928 519 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 UBXN1Q04323 297 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 MAP7Q14244 749 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 TNIP1Q15025 636 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 SMAD1Q15797 465 aaKnown RBP8.09□□□□□ -1.11
NEMF-209ENST00000556074 POMZP3Q6PJE2 187 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 PPM1NQ8N819 430 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 ARHGAP9Q9BRR9 750 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 DUSP12Q9UNI6 340 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 PCDHGA9Q9Y5G4 932 aaKnown RBP8.09□□□□□ -1.11
NEMF-209ENST00000556074 PCDHGA8Q9Y5G5 932 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 PCDHGA7Q9Y5G6 932 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 PCDHGA6Q9Y5G7 932 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 PCDHGA3Q9Y5H0 932 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 PCDHGA2Q9Y5H1 932 aa8.09□□□□□ -1.11
NEMF-209ENST00000556074 KLHL33A6NCF5 533 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms