RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 NKX2-4Q9H2Z4 354 aa22.93■■□□□ 1.26
PRKCH-219ENST00000555906 YBX2Q9Y2T7 364 aaKnown RBP22.93■■□□□ 1.26
PRKCH-219ENST00000555906 ERICH2A1L162 156 aa22.92■■□□□ 1.26
PRKCH-219ENST00000555906 ZBBXA8MT70 800 aa22.92■■□□□ 1.26
PRKCH-219ENST00000555906 SGSM2O43147 1006 aa22.92■■□□□ 1.26
PRKCH-219ENST00000555906 NR3C2P08235 984 aa22.92■■□□□ 1.26
PRKCH-219ENST00000555906 TRAF1Q13077 416 aa22.92■■□□□ 1.26
PRKCH-219ENST00000555906 BFSP2Q13515 415 aa22.92■■□□□ 1.26
PRKCH-219ENST00000555906 USP38Q8NB14 1042 aa22.92■■□□□ 1.26
PRKCH-219ENST00000555906 PPP1R13LQ8WUF5 828 aa22.92■■□□□ 1.26
PRKCH-219ENST00000555906 PRDM12Q9H4Q4 367 aa22.92■■□□□ 1.26
PRKCH-219ENST00000555906 DDX41Q9UJV9 622 aaKnown RBP22.92■■□□□ 1.26
PRKCH-219ENST00000555906 NOD1Q9Y239 953 aa22.92■■□□□ 1.26
PRKCH-219ENST00000555906 PCDHA1Q9Y5I3 950 aa22.92■■□□□ 1.26
PRKCH-219ENST00000555906 MRVI1Q9Y6F6 885 aa22.92■■□□□ 1.26
PRKCH-219ENST00000555906 PTPRSQ13332 1948 aa22.92■■□□□ 1.26
PRKCH-219ENST00000555906 TTC28Q96AY4 2481 aa22.91■■□□□ 1.26
PRKCH-219ENST00000555906 IFIT3O14879 490 aaKnown RBP22.91■■□□□ 1.26
PRKCH-219ENST00000555906 ACTN1P12814 892 aa22.91■■□□□ 1.26
PRKCH-219ENST00000555906 SART3Q15020 963 aaKnown RBP22.91■■□□□ 1.26
PRKCH-219ENST00000555906 DGKDQ16760 1214 aa22.91■■□□□ 1.26
PRKCH-219ENST00000555906 SLC35G1Q2M3R5 365 aa22.91■■□□□ 1.26
PRKCH-219ENST00000555906 STOX1Q6ZVD7 989 aa22.91■■□□□ 1.26
PRKCH-219ENST00000555906 DEFB128Q7Z7B8 93 aa22.91■■□□□ 1.26
PRKCH-219ENST00000555906 CCDC155Q8N6L0 562 aa22.91■■□□□ 1.26
PRKCH-219ENST00000555906 NCOA7Q8NI08 942 aa22.91■■□□□ 1.26
PRKCH-219ENST00000555906 PDCD2LQ9BRP1 358 aa22.91■■□□□ 1.26
PRKCH-219ENST00000555906 RIOX1Q9H6W3 641 aa22.91■■□□□ 1.26
PRKCH-219ENST00000555906 SLC28A3Q9HAS3 691 aa22.91■■□□□ 1.26
PRKCH-219ENST00000555906 PCDHA11Q9Y5I1 949 aa22.91■■□□□ 1.26
PRKCH-219ENST00000555906 TRANK1O15050 2925 aa22.91■■□□□ 1.26
PRKCH-219ENST00000555906 E7EWF7 191 aa22.9■■□□□ 1.26
PRKCH-219ENST00000555906 IQCF3P0C7M6 154 aa22.9■■□□□ 1.26
PRKCH-219ENST00000555906 ATP2A2P16615 1042 aaKnown RBP22.9■■□□□ 1.26
PRKCH-219ENST00000555906 CASTP20810 708 aaKnown RBP22.9■■□□□ 1.26
PRKCH-219ENST00000555906 WTAPQ15007 396 aa22.9■■□□□ 1.26
PRKCH-219ENST00000555906 PTGISQ16647 500 aa22.9■■□□□ 1.26
PRKCH-219ENST00000555906 CHST3Q7LGC8 479 aa22.9■■□□□ 1.26
PRKCH-219ENST00000555906 HOMER1Q86YM7 354 aa22.9■■□□□ 1.26
PRKCH-219ENST00000555906 RETREG2Q8NC44 543 aa22.9■■□□□ 1.26
PRKCH-219ENST00000555906 PPTC7Q8NI37 304 aa22.9■■□□□ 1.26
PRKCH-219ENST00000555906 CAGE1Q8TC20 777 aa22.9■■□□□ 1.26
PRKCH-219ENST00000555906 KAT2BQ92831 832 aa22.9■■□□□ 1.26
PRKCH-219ENST00000555906 KATNAL1Q9BW62 490 aa22.9■■□□□ 1.26
PRKCH-219ENST00000555906 TAF6LQ9Y6J9 622 aa22.9■■□□□ 1.26
PRKCH-219ENST00000555906 F2P00734 622 aa22.89■■□□□ 1.25
PRKCH-219ENST00000555906 TROAPQ12815 778 aa22.89■■□□□ 1.25
PRKCH-219ENST00000555906 PPP2R2DQ66LE6 453 aa22.89■■□□□ 1.25
PRKCH-219ENST00000555906 CTAGE1Q96RT6 745 aa22.89■■□□□ 1.25
PRKCH-219ENST00000555906 SLC9A7Q96T83 725 aa22.89■■□□□ 1.25
PRKCH-219ENST00000555906 SENP2Q9HC62 589 aa22.89■■□□□ 1.25
PRKCH-219ENST00000555906 CYTH3O43739 400 aa22.88■■□□□ 1.25
PRKCH-219ENST00000555906 RGS20O76081 388 aa22.88■■□□□ 1.25
PRKCH-219ENST00000555906 HOXD8P13378 290 aaPredicted RBP22.88■■□□□ 1.25
PRKCH-219ENST00000555906 RABGGTBP53611 331 aa22.88■■□□□ 1.25
PRKCH-219ENST00000555906 CHMP4BP1P59074 171 aa22.88■■□□□ 1.25
PRKCH-219ENST00000555906 RBL2Q08999 1139 aa22.88■■□□□ 1.25
PRKCH-219ENST00000555906 LAMC2Q13753 1193 aa22.88■■□□□ 1.25
PRKCH-219ENST00000555906 PGM5Q15124 567 aa22.88■■□□□ 1.25
PRKCH-219ENST00000555906 GDF6Q6KF10 455 aaPredicted RBP22.88■■□□□ 1.25
PRKCH-219ENST00000555906 KCNV1Q6PIU1 500 aa22.88■■□□□ 1.25
PRKCH-219ENST00000555906 AFAP1L1Q8TED9 768 aa22.88■■□□□ 1.25
PRKCH-219ENST00000555906 PIGSQ96S52 555 aa22.88■■□□□ 1.25
PRKCH-219ENST00000555906 GTF2IRD1Q9UHL9 959 aa22.88■■□□□ 1.25
PRKCH-219ENST00000555906 HOXA13P31271 388 aaPredicted RBP22.87■■□□□ 1.25
PRKCH-219ENST00000555906 TMEM67Q5HYA8 995 aa22.87■■□□□ 1.25
PRKCH-219ENST00000555906 CATIPQ7Z7H3 387 aa22.87■■□□□ 1.25
PRKCH-219ENST00000555906 MB21D2Q8IYB1 491 aaPredicted RBP22.87■■□□□ 1.25
PRKCH-219ENST00000555906 MAP4K1Q92918 833 aa22.87■■□□□ 1.25
PRKCH-219ENST00000555906 FRMPD4Q14CM0 1322 aa22.86■■□□□ 1.25
PRKCH-219ENST00000555906 MUC3AQ02505 3323 aa22.86■■□□□ 1.25
PRKCH-219ENST00000555906 PNMA6FA0A0J9YX94 578 aa22.86■■□□□ 1.25
PRKCH-219ENST00000555906 GCOM1H8Y6P7 765 aaPredicted RBP22.86■■□□□ 1.25
PRKCH-219ENST00000555906 BAIAP3O94812 1187 aa22.86■■□□□ 1.25
PRKCH-219ENST00000555906 POLR2MP0CAP2 368 aa22.86■■□□□ 1.25
PRKCH-219ENST00000555906 MYCLP12524 364 aaPredicted RBP22.86■■□□□ 1.25
PRKCH-219ENST00000555906 PSEN2P49810 448 aa22.86■■□□□ 1.25
PRKCH-219ENST00000555906 ANTXR2P58335 489 aa22.86■■□□□ 1.25
PRKCH-219ENST00000555906 IRX6P78412 446 aaPredicted RBP22.86■■□□□ 1.25
PRKCH-219ENST00000555906 ADGRE1Q14246 886 aa22.86■■□□□ 1.25
PRKCH-219ENST00000555906 VSIG10LQ86VR7 867 aa22.86■■□□□ 1.25
PRKCH-219ENST00000555906 DHX37Q8IY37 1157 aaKnown RBP22.86■■□□□ 1.25
PRKCH-219ENST00000555906 IL31RAQ8NI17 732 aa22.86■■□□□ 1.25
PRKCH-219ENST00000555906 DOCK5Q9H7D0 1870 aa22.85■■□□□ 1.25
PRKCH-219ENST00000555906 HAS3O00219 553 aa22.85■■□□□ 1.25
PRKCH-219ENST00000555906 ZNF286BP0CG31 522 aa22.85■■□□□ 1.25
PRKCH-219ENST00000555906 MYOGP15173 224 aa22.85■■□□□ 1.25
PRKCH-219ENST00000555906 CCND2P30279 289 aa22.85■■□□□ 1.25
PRKCH-219ENST00000555906 MFSD10Q14728 455 aa22.85■■□□□ 1.25
PRKCH-219ENST00000555906 C7orf31Q8N865 590 aa22.85■■□□□ 1.25
PRKCH-219ENST00000555906 PHOSPHO2Q8TCD6 241 aa22.85■■□□□ 1.25
PRKCH-219ENST00000555906 DHX38Q92620 1227 aaKnown RBP22.85■■□□□ 1.25
PRKCH-219ENST00000555906 SYMPKQ92797 1274 aaKnown RBP22.85■■□□□ 1.25
PRKCH-219ENST00000555906 RBM8AQ9Y5S9 174 aaKnown RBP22.85■■□□□ 1.25
PRKCH-219ENST00000555906 COL4A4P53420 1690 aaPredicted RBP22.84■■□□□ 1.25
PRKCH-219ENST00000555906 PARNO95453 639 aaKnown RBP22.84■■□□□ 1.25
PRKCH-219ENST00000555906 TGFB3P10600 412 aa22.84■■□□□ 1.25
PRKCH-219ENST00000555906 SELPP16109 830 aa22.84■■□□□ 1.25
PRKCH-219ENST00000555906 UBA1P22314 1058 aaKnown RBP22.84■■□□□ 1.25
PRKCH-219ENST00000555906 CELF3Q5SZQ8 465 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms