RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 SNW1Q13573 536 aaKnown RBP11.56□□□□□ -0.56
SRP54-208ENST00000555557 PGM5Q15124 567 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 RESP18Q5W5W9 173 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 MBOAT7Q96N66 472 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 PDCD2LQ9BRP1 358 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 CREBZFQ9NS37 354 aa11.56□□□□□ -0.56
SRP54-208ENST00000555557 MORC2Q9Y6X9 1032 aaPredicted RBP11.56□□□□□ -0.56
SRP54-208ENST00000555557 IGLV3-22A0A075B6J6 115 aa11.55□□□□□ -0.56
SRP54-208ENST00000555557 PP2D1A8MPX8 630 aa11.55□□□□□ -0.56
SRP54-208ENST00000555557 LAD1O00515 517 aa11.55□□□□□ -0.56
SRP54-208ENST00000555557 MARCH6O60337 910 aa11.55□□□□□ -0.56
SRP54-208ENST00000555557 ITGB5P18084 799 aa11.55□□□□□ -0.56
SRP54-208ENST00000555557 MRPS9P82933 396 aaKnown RBP11.55□□□□□ -0.56
SRP54-208ENST00000555557 ORC2Q13416 577 aaPredicted RBP11.55□□□□□ -0.56
SRP54-208ENST00000555557 Q4G0T1 1027 aa11.55□□□□□ -0.56
SRP54-208ENST00000555557 MOXD1Q6UVY6 613 aa11.55□□□□□ -0.56
SRP54-208ENST00000555557 CCDC73Q6ZRK6 1079 aa11.55□□□□□ -0.56
SRP54-208ENST00000555557 ZNF579Q8NAF0 562 aaKnown RBP11.55□□□□□ -0.56
SRP54-208ENST00000555557 ENGASEQ8NFI3 743 aa11.55□□□□□ -0.56
SRP54-208ENST00000555557 SYMPKQ92797 1274 aaKnown RBP11.55□□□□□ -0.56
SRP54-208ENST00000555557 CAPNS2Q96L46 248 aa11.55□□□□□ -0.56
SRP54-208ENST00000555557 NAP1L4Q99733 375 aaKnown RBP11.55□□□□□ -0.56
SRP54-208ENST00000555557 ASTN1O14525 1302 aa11.55□□□□□ -0.56
SRP54-208ENST00000555557 RASSF10A6NK89 507 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 POTEB2H3BUK9 544 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 MSH4O15457 936 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 NR3C2P08235 984 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 ARP10275 920 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 PRPHP41219 470 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 TM4SF4P48230 202 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 SREBF2Q12772 1141 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 CAMK4Q16566 473 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 CEP55Q53EZ4 464 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 PCNX4Q63HM2 1172 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 PLA2G4DQ86XP0 818 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 FMR1NBQ8N0W7 255 aaPredicted RBP11.54□□□□□ -0.56
SRP54-208ENST00000555557 DNAJC5GQ8N7S2 189 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 PDILTQ8N807 584 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 ETNPPLQ8TBG4 499 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 NSUN6Q8TEA1 469 aaKnown RBP11.54□□□□□ -0.56
SRP54-208ENST00000555557 MMP19Q99542 508 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 WDR11Q9BZH6 1224 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 MROH8Q9H579 483 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 TTC12Q9H892 705 aaPredicted RBP11.54□□□□□ -0.56
SRP54-208ENST00000555557 KCNMB3Q9NPA1 279 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 MORF4L1Q9UBU8 362 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 HPSEQ9Y251 543 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 PFASO15067 1338 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.54□□□□□ -0.56
SRP54-208ENST00000555557 FCER1AP12319 257 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 CCNA1P78396 465 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 FAM160A1Q05DH4 1040 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 KCTD2Q14681 263 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 FAM110CQ1W6H9 321 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 SHCBP1Q8NEM2 672 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 MXRA8Q9BRK3 442 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 KCNH3Q9ULD8 1083 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 FRMPD4Q14CM0 1322 aa11.54□□□□□ -0.56
SRP54-208ENST00000555557 A0A087X0B3 334 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 SOWAHBA6NEL2 793 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 POTEMA6NI47 508 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 MEIS1O00470 390 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 TLR2O60603 784 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 ZNF202O95125 648 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 COPB2P35606 906 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 LONP1P36776 959 aaKnown RBP11.53□□□□□ -0.56
SRP54-208ENST00000555557 SYKP43405 635 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 NOGQ13253 232 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 CRHR2Q13324 411 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 VSIG10LQ86VR7 867 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 FAM133AQ8N9E0 248 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 UBE2Q2Q8WVN8 375 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 FAM13BQ9NYF5 915 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 PKD2L1Q9P0L9 805 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 PCDHA12Q9UN75 941 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 ADGRA2Q96PE1 1338 aa11.53□□□□□ -0.56
SRP54-208ENST00000555557 POLR2DO15514 142 aaKnown RBP11.52□□□□□ -0.56
SRP54-208ENST00000555557 BCRP11274 1271 aa11.52□□□□□ -0.56
SRP54-208ENST00000555557 ALDH5A1P51649 535 aaPredicted RBP11.52□□□□□ -0.56
SRP54-208ENST00000555557 ZRSR1Q15695 479 aaKnown RBP11.52□□□□□ -0.56
SRP54-208ENST00000555557 PLIN2Q99541 437 aa11.52□□□□□ -0.56
SRP54-208ENST00000555557 ZFYVE28Q9HCC9 887 aa11.52□□□□□ -0.56
SRP54-208ENST00000555557 ZCCHC17Q9NP64 241 aaKnown RBP11.52□□□□□ -0.56
SRP54-208ENST00000555557 KCNH7Q9NS40 1196 aa11.52□□□□□ -0.56
SRP54-208ENST00000555557 UBIAD1Q9Y5Z9 338 aa11.52□□□□□ -0.56
SRP54-208ENST00000555557 DNAJC25-GNG10A0A024R161 153 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 FAM237AA0A1B0GTK4 181 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 RGS20O76081 388 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 CCND2P30279 289 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 FXR2P51116 673 aaKnown RBP eCLIP11.52□□□□□ -0.572e-6■■■□□ 15.9
SRP54-208ENST00000555557 KARSQ15046 597 aaKnown RBP11.52□□□□□ -0.57
SRP54-208ENST00000555557 TMEM266Q2M3C6 531 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 ZSCAN23Q3MJ62 389 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 LONRF3Q496Y0 759 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 C17orf99Q6UX52 265 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 GPR142Q7Z601 462 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 SLFN12Q8IYM2 578 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 IGSF22Q8N9C0 903 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 DNERQ8NFT8 737 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 ERCC4Q92889 916 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms