RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 TBCKQ8TEA7 893 aa14.47□□□□□ -0.09
SYNE2-219ENST00000555323 ARMC5Q96C12 935 aa14.47□□□□□ -0.09
SYNE2-219ENST00000555323 INPP4AQ96PE3 977 aaPredicted RBP14.47□□□□□ -0.09
SYNE2-219ENST00000555323 MTMR6Q9Y217 621 aa14.47□□□□□ -0.09
SYNE2-219ENST00000555323 CNPY2Q9Y2B0 182 aa14.47□□□□□ -0.09
SYNE2-219ENST00000555323 UBIAD1Q9Y5Z9 338 aa14.47□□□□□ -0.09
SYNE2-219ENST00000555323 RBBP6Q7Z6E9 1792 aaKnown RBP14.47□□□□□ -0.09
SYNE2-219ENST00000555323 PLXNA1Q9UIW2 1896 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 CYP3A7-CYP3A51PA0A087WV96 503 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 KIF28PB7ZC32 967 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 RGS20O76081 388 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 INHAP05111 366 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 TGFB3P10600 412 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 MYCLP12524 364 aaPredicted RBP14.46□□□□□ -0.09
SYNE2-219ENST00000555323 CYP3A7P24462 503 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 ICAM3P32942 547 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 UBXN2AP68543 259 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 SLC9C1Q4G0N8 1177 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 PRAMEF19Q5SWL8 479 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 IQSEC1Q6DN90 963 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 MOXD1Q6UVY6 613 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 PIK3AP1Q6ZUJ8 805 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 NOSTRINQ8IVI9 506 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 SPRYD3Q8NCJ5 442 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 TRPV1Q8NER1 839 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 MCOLN1Q9GZU1 580 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 JADE2Q9NQC1 790 aa14.46□□□□□ -0.09
SYNE2-219ENST00000555323 DDX49Q9Y6V7 483 aaKnown RBP14.46□□□□□ -0.09
SYNE2-219ENST00000555323 MEIS1O00470 390 aa14.45□□□□□ -0.1
SYNE2-219ENST00000555323 PRKAR2AP13861 404 aaKnown RBP14.45□□□□□ -0.1
SYNE2-219ENST00000555323 ITGB5P18084 799 aa14.45□□□□□ -0.1
SYNE2-219ENST00000555323 DDIT3P35638 169 aa14.45□□□□□ -0.1
SYNE2-219ENST00000555323 INF2Q27J81 1249 aa14.45□□□□□ -0.1
SYNE2-219ENST00000555323 CEP55Q53EZ4 464 aa14.45□□□□□ -0.1
SYNE2-219ENST00000555323 PPP4R3AQ6IN85 833 aa14.45□□□□□ -0.1
SYNE2-219ENST00000555323 CCDC62Q6P9F0 684 aa14.45□□□□□ -0.1
SYNE2-219ENST00000555323 KCNV1Q6PIU1 500 aa14.45□□□□□ -0.1
SYNE2-219ENST00000555323 NIPA1Q7RTP0 329 aa14.45□□□□□ -0.1
SYNE2-219ENST00000555323 NEK8Q86SG6 692 aa14.45□□□□□ -0.1
SYNE2-219ENST00000555323 SH3TC2Q8TF17 1288 aa14.45□□□□□ -0.1
SYNE2-219ENST00000555323 ZNF333Q96JL9 665 aa14.45□□□□□ -0.1
SYNE2-219ENST00000555323 MBOAT7Q96N66 472 aa14.45□□□□□ -0.1
SYNE2-219ENST00000555323 MXRA8Q9BRK3 442 aa14.45□□□□□ -0.1
SYNE2-219ENST00000555323 HMX1Q9NP08 348 aaPredicted RBP14.45□□□□□ -0.1
SYNE2-219ENST00000555323 IGLV3-22A0A075B6J6 115 aa14.44□□□□□ -0.1
SYNE2-219ENST00000555323 SPATA31C2B4DYI2 1134 aa14.44□□□□□ -0.1
SYNE2-219ENST00000555323 FAM86B1E9PN63 330 aa14.44□□□□□ -0.1
SYNE2-219ENST00000555323 SEPT4O43236 478 aa14.44□□□□□ -0.1
SYNE2-219ENST00000555323 FAM86B2P0C5J1 330 aa14.44□□□□□ -0.1
SYNE2-219ENST00000555323 TRAPPC10P48553 1259 aa14.44□□□□□ -0.1
SYNE2-219ENST00000555323 EEPD1Q7L9B9 569 aa14.44□□□□□ -0.1
SYNE2-219ENST00000555323 NLRX1Q86UT6 975 aa14.44□□□□□ -0.1
SYNE2-219ENST00000555323 FBXO16Q8IX29 292 aaPredicted RBP14.44□□□□□ -0.1
SYNE2-219ENST00000555323 SCFD2Q8WU76 684 aa14.44□□□□□ -0.1
SYNE2-219ENST00000555323 GPRASP2Q96D09 838 aa14.44□□□□□ -0.1
SYNE2-219ENST00000555323 PDGFCQ9NRA1 345 aa14.44□□□□□ -0.1
SYNE2-219ENST00000555323 RTEL1Q9NZ71 1219 aa14.44□□□□□ -0.1
SYNE2-219ENST00000555323 HTTP42858 3142 aa14.44□□□□□ -0.1
SYNE2-219ENST00000555323 FAM205CA6NFA0 338 aa14.43□□□□□ -0.1
SYNE2-219ENST00000555323 FIBPO43427 364 aa14.43□□□□□ -0.1
SYNE2-219ENST00000555323 GCFC2P16383 781 aaKnown RBP14.43□□□□□ -0.1
SYNE2-219ENST00000555323 CCND3P30281 292 aaPredicted RBP14.43□□□□□ -0.1
SYNE2-219ENST00000555323 CCDC144BQ3MJ40 725 aa14.43□□□□□ -0.1
SYNE2-219ENST00000555323 GNPTABQ3T906 1256 aa14.43□□□□□ -0.1
SYNE2-219ENST00000555323 Q4G0T1 1027 aa14.43□□□□□ -0.1
SYNE2-219ENST00000555323 COL13A1Q5TAT6 717 aaPredicted RBP14.43□□□□□ -0.1
SYNE2-219ENST00000555323 MCTP1Q6DN14 999 aa14.43□□□□□ -0.1
SYNE2-219ENST00000555323 SEPT14Q6ZU15 432 aa14.43□□□□□ -0.1
SYNE2-219ENST00000555323 BRAPQ7Z569 592 aa14.43□□□□□ -0.1
SYNE2-219ENST00000555323 CYP2W1Q8TAV3 490 aa14.43□□□□□ -0.1
SYNE2-219ENST00000555323 LENG9Q96B70 501 aa14.43□□□□□ -0.1
SYNE2-219ENST00000555323 ZFP91Q96JP5 570 aaPredicted RBP14.43□□□□□ -0.1
SYNE2-219ENST00000555323 CDHR1Q96JP9 859 aa14.43□□□□□ -0.1
SYNE2-219ENST00000555323 NAP1L4Q99733 375 aaKnown RBP14.43□□□□□ -0.1
SYNE2-219ENST00000555323 SENP7Q9BQF6 1050 aa14.43□□□□□ -0.1
SYNE2-219ENST00000555323 WDR11Q9BZH6 1224 aa14.43□□□□□ -0.1
SYNE2-219ENST00000555323 ZSCAN16Q9H4T2 348 aaPredicted RBP14.43□□□□□ -0.1
SYNE2-219ENST00000555323 PAK6Q9NQU5 681 aaPredicted RBP14.43□□□□□ -0.1
SYNE2-219ENST00000555323 DDX41Q9UJV9 622 aaKnown RBP14.43□□□□□ -0.1
SYNE2-219ENST00000555323 FAM184BQ9ULE4 1060 aa14.43□□□□□ -0.1
SYNE2-219ENST00000555323 GNEQ9Y223 722 aaKnown RBP14.43□□□□□ -0.1
SYNE2-219ENST00000555323 Q9Y3F1 56 aa14.43□□□□□ -0.1
SYNE2-219ENST00000555323 VPS37CA5D8V6 355 aaPredicted RBP14.42□□□□□ -0.1
SYNE2-219ENST00000555323 NKRFO15226 690 aaKnown RBP eCLIP14.42□□□□□ -0.1
SYNE2-219ENST00000555323 MSCO60682 206 aa14.42□□□□□ -0.1
SYNE2-219ENST00000555323 AKR1A1P14550 325 aa14.42□□□□□ -0.1
SYNE2-219ENST00000555323 ZNF76P36508 570 aa14.42□□□□□ -0.1
SYNE2-219ENST00000555323 ADCYAP1R1P41586 468 aa14.42□□□□□ -0.1
SYNE2-219ENST00000555323 TOB1P50616 345 aaPredicted RBP14.42□□□□□ -0.1
SYNE2-219ENST00000555323 NKX3-2P78367 333 aa14.42□□□□□ -0.1
SYNE2-219ENST00000555323 SEMA3FQ13275 785 aa14.42□□□□□ -0.1
SYNE2-219ENST00000555323 ORC2Q13416 577 aaPredicted RBP14.42□□□□□ -0.1
SYNE2-219ENST00000555323 GNL2Q13823 731 aaKnown RBP14.42□□□□□ -0.1
SYNE2-219ENST00000555323 TTLL4Q14679 1199 aa14.42□□□□□ -0.1
SYNE2-219ENST00000555323 MTFR1Q15390 333 aa14.42□□□□□ -0.1
SYNE2-219ENST00000555323 DUSP28Q4G0W2 176 aa14.42□□□□□ -0.1
SYNE2-219ENST00000555323 RILPL1Q5EBL4 403 aa14.42□□□□□ -0.1
SYNE2-219ENST00000555323 KCNH7Q9NS40 1196 aa14.42□□□□□ -0.1
SYNE2-219ENST00000555323 ZHX1Q9UKY1 873 aaPredicted RBP14.42□□□□□ -0.1
SYNE2-219ENST00000555323 DUSP11O75319 330 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms