RNA–Protein interactions for RNA: ENST00000555117.1

COCH-208, Transcript of cochlin, humanhuman

TSL 2

Gene COCH, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-208ENST00000555117 RIOX1Q9H6W3 641 aa25.71■■□□□ 1.71
COCH-208ENST00000555117 SCN5AQ14524 2016 aa25.71■■□□□ 1.71
COCH-208ENST00000555117 GH1P01241 217 aa25.7■■□□□ 1.7
COCH-208ENST00000555117 FGBP02675 491 aa25.7■■□□□ 1.7
COCH-208ENST00000555117 NR3C2P08235 984 aa25.7■■□□□ 1.7
COCH-208ENST00000555117 CYP2C9P11712 490 aa25.7■■□□□ 1.7
COCH-208ENST00000555117 ARHGAP1Q07960 439 aa25.7■■□□□ 1.7
COCH-208ENST00000555117 AFG1LQ8WV93 481 aa25.7■■□□□ 1.7
COCH-208ENST00000555117 HERVK_113Q902F9 699 aa25.7■■□□□ 1.7
COCH-208ENST00000555117 MTA3Q9BTC8 594 aa25.7■■□□□ 1.7
COCH-208ENST00000555117 MAP3K20Q9NYL2 800 aaKnown RBP25.7■■□□□ 1.7
COCH-208ENST00000555117 SNX14Q9Y5W7 946 aa25.7■■□□□ 1.7
COCH-208ENST00000555117 GRXCR1A8MXD5 290 aa25.69■■□□□ 1.7
COCH-208ENST00000555117 CYTH3O43739 400 aa25.69■■□□□ 1.7
COCH-208ENST00000555117 EIF3JO75822 258 aaKnown RBP25.69■■□□□ 1.7
COCH-208ENST00000555117 MMP3P08254 477 aa25.69■■□□□ 1.7
COCH-208ENST00000555117 TRAF1Q13077 416 aa25.69■■□□□ 1.7
COCH-208ENST00000555117 NFRKBQ6P4R8 1299 aa25.69■■□□□ 1.7
COCH-208ENST00000555117 CATIPQ7Z7H3 387 aa25.69■■□□□ 1.7
COCH-208ENST00000555117 SCLYQ96I15 445 aa25.69■■□□□ 1.7
COCH-208ENST00000555117 MTIF3Q9H2K0 278 aaKnown RBP25.69■■□□□ 1.7
COCH-208ENST00000555117 EYSQ5T1H1 3165 aa25.69■■□□□ 1.7
COCH-208ENST00000555117 PRC1O43663 620 aa25.68■■□□□ 1.7
COCH-208ENST00000555117 MCM5P33992 734 aa25.68■■□□□ 1.7
COCH-208ENST00000555117 KRT32Q14532 448 aa25.68■■□□□ 1.7
COCH-208ENST00000555117 C8orf34Q49A92 452 aa25.68■■□□□ 1.7
COCH-208ENST00000555117 SAMD3Q8N6K7 520 aa25.68■■□□□ 1.7
COCH-208ENST00000555117 TIFAQ96CG3 184 aa25.68■■□□□ 1.7
COCH-208ENST00000555117 NEK1Q96PY6 1258 aa25.68■■□□□ 1.7
COCH-208ENST00000555117 PDCD2LQ9BRP1 358 aa25.68■■□□□ 1.7
COCH-208ENST00000555117 CXXC1Q9P0U4 656 aaPredicted RBP25.68■■□□□ 1.7
COCH-208ENST00000555117 DDX41Q9UJV9 622 aaKnown RBP25.68■■□□□ 1.7
COCH-208ENST00000555117 UNC80Q8N2C7 3258 aa25.67■■□□□ 1.7
COCH-208ENST00000555117 HOXA13P31271 388 aaPredicted RBP25.67■■□□□ 1.7
COCH-208ENST00000555117 CHMP4BP1P59074 171 aa25.67■■□□□ 1.7
COCH-208ENST00000555117 EXOSC10Q01780 885 aaKnown RBP25.67■■□□□ 1.7
COCH-208ENST00000555117 PTPN11Q06124 597 aaPredicted RBP25.67■■□□□ 1.7
COCH-208ENST00000555117 OTOP2Q7RTS6 562 aa25.67■■□□□ 1.7
COCH-208ENST00000555117 RPUSD2Q8IZ73 545 aaKnown RBP25.67■■□□□ 1.7
COCH-208ENST00000555117 PBX4Q9BYU1 374 aa25.67■■□□□ 1.7
COCH-208ENST00000555117 MRVI1Q9Y6F6 885 aa25.67■■□□□ 1.7
COCH-208ENST00000555117 PNMA6FA0A0J9YX94 578 aa25.66■■□□□ 1.7
COCH-208ENST00000555117 SEC24BO95487 1268 aa25.66■■□□□ 1.7
COCH-208ENST00000555117 MYCLP12524 364 aaPredicted RBP25.66■■□□□ 1.7
COCH-208ENST00000555117 FOSL2P15408 326 aa25.66■■□□□ 1.7
COCH-208ENST00000555117 PBX2P40425 430 aa25.66■■□□□ 1.7
COCH-208ENST00000555117 LY9Q9HBG7 655 aa25.66■■□□□ 1.7
COCH-208ENST00000555117 GCOM1H8Y6P7 765 aaPredicted RBP25.65■■□□□ 1.7
COCH-208ENST00000555117 DLL1O00548 723 aa25.65■■□□□ 1.7
COCH-208ENST00000555117 SH2B2O14492 632 aaPredicted RBP25.65■■□□□ 1.7
COCH-208ENST00000555117 POLR2MP0CAP2 368 aa25.65■■□□□ 1.7
COCH-208ENST00000555117 GRIN2CQ14957 1233 aa25.65■■□□□ 1.7
COCH-208ENST00000555117 PGM5Q15124 567 aa25.65■■□□□ 1.7
COCH-208ENST00000555117 MAFAQ8NHW3 353 aaPredicted RBP25.65■■□□□ 1.7
COCH-208ENST00000555117 TMEM87BQ96K49 555 aa25.65■■□□□ 1.7
COCH-208ENST00000555117 ZNF576Q9H609 170 aa25.65■■□□□ 1.7
COCH-208ENST00000555117 TRIP12Q14669 1992 aaPredicted RBP25.64■■□□□ 1.7
COCH-208ENST00000555117 CASTP20810 708 aaKnown RBP25.64■■□□□ 1.7
COCH-208ENST00000555117 DHX32Q7L7V1 743 aaKnown RBP25.64■■□□□ 1.7
COCH-208ENST00000555117 ZNF654Q8IZM8 581 aa25.64■■□□□ 1.7
COCH-208ENST00000555117 PIBF1Q8WXW3 757 aa25.64■■□□□ 1.7
COCH-208ENST00000555117 EMID1Q96A84 441 aaPredicted RBP25.64■■□□□ 1.7
COCH-208ENST00000555117 VWCEQ96DN2 955 aa25.64■■□□□ 1.7
COCH-208ENST00000555117 MYL10Q9BUA6 226 aa25.64■■□□□ 1.7
COCH-208ENST00000555117 NOD1Q9Y239 953 aa25.64■■□□□ 1.7
COCH-208ENST00000555117 RGS20O76081 388 aa25.63■■□□□ 1.69
COCH-208ENST00000555117 DDAH1O94760 285 aa25.63■■□□□ 1.69
COCH-208ENST00000555117 DGKDQ16760 1214 aa25.63■■□□□ 1.69
COCH-208ENST00000555117 VSIG10LQ86VR7 867 aa25.63■■□□□ 1.69
COCH-208ENST00000555117 FCHSD1Q86WN1 690 aa25.63■■□□□ 1.69
COCH-208ENST00000555117 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.63■■□□□ 1.69
COCH-208ENST00000555117 DHX37Q8IY37 1157 aaKnown RBP25.63■■□□□ 1.69
COCH-208ENST00000555117 IL31RAQ8NI17 732 aa25.63■■□□□ 1.69
COCH-208ENST00000555117 CTCFLQ8NI51 663 aaPredicted RBP25.63■■□□□ 1.69
COCH-208ENST00000555117 KAT2BQ92831 832 aa25.63■■□□□ 1.69
COCH-208ENST00000555117 MAP3K14Q99558 947 aa25.63■■□□□ 1.69
COCH-208ENST00000555117 PFKMP08237 780 aa25.62■■□□□ 1.69
COCH-208ENST00000555117 LIFRP42702 1097 aa25.62■■□□□ 1.69
COCH-208ENST00000555117 LAMC2Q13753 1193 aa25.62■■□□□ 1.69
COCH-208ENST00000555117 DEFB128Q7Z7B8 93 aa25.62■■□□□ 1.69
COCH-208ENST00000555117 LRRC2Q9BYS8 371 aa25.62■■□□□ 1.69
COCH-208ENST00000555117 ZBBXA8MT70 800 aa25.61■■□□□ 1.69
COCH-208ENST00000555117 PITPNM1O00562 1244 aa25.61■■□□□ 1.69
COCH-208ENST00000555117 HMGB1P09429 215 aaKnown RBP25.61■■□□□ 1.69
COCH-208ENST00000555117 CCND2P30279 289 aa25.61■■□□□ 1.69
COCH-208ENST00000555117 KIF5BP33176 963 aa25.61■■□□□ 1.69
COCH-208ENST00000555117 RAB30Q15771 203 aa25.61■■□□□ 1.69
COCH-208ENST00000555117 PTGISQ16647 500 aa25.61■■□□□ 1.69
COCH-208ENST00000555117 KCNV1Q6PIU1 500 aa25.61■■□□□ 1.69
COCH-208ENST00000555117 SESTD1Q86VW0 696 aa25.61■■□□□ 1.69
COCH-208ENST00000555117 RETREG2Q8NC44 543 aa25.61■■□□□ 1.69
COCH-208ENST00000555117 PPTC7Q8NI37 304 aa25.61■■□□□ 1.69
COCH-208ENST00000555117 JAKMIP1Q96N16 626 aaKnown RBP25.61■■□□□ 1.69
COCH-208ENST00000555117 SPZ1Q9BXG8 430 aa25.61■■□□□ 1.69
COCH-208ENST00000555117 MSRAQ9UJ68 235 aa25.61■■□□□ 1.69
COCH-208ENST00000555117 EIF5BO60841 1220 aaKnown RBP25.6■■□□□ 1.69
COCH-208ENST00000555117 CPA1P15085 419 aa25.6■■□□□ 1.69
COCH-208ENST00000555117 RFC2P35250 354 aa25.6■■□□□ 1.69
COCH-208ENST00000555117 BFSP2Q13515 415 aa25.6■■□□□ 1.69
COCH-208ENST00000555117 GDF6Q6KF10 455 aaPredicted RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms