RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 ORC3Q9UBD5 711 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-230ENST00000554673 SERPINB13Q9UIV8 391 aa6.8□□□□□ -1.32
ATXN3-230ENST00000554673 HACL1Q9UJ83 578 aa6.8□□□□□ -1.32
ATXN3-230ENST00000554673 SMC3Q9UQE7 1217 aa6.8□□□□□ -1.32
ATXN3-230ENST00000554673 NOD1Q9Y239 953 aa6.8□□□□□ -1.32
ATXN3-230ENST00000554673 GJA3Q9Y6H8 435 aa6.8□□□□□ -1.32
ATXN3-230ENST00000554673 ZNFX1Q9P2E3 1918 aaKnown RBP6.8□□□□□ -1.32
ATXN3-230ENST00000554673 FRMPD2Q68DX3 1309 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-230ENST00000554673 MCM3APO60318 1980 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 ADM5C9JUS6 153 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 RBAK-RBAKDNI3L0D1 243 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 PEX10O60683 326 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 SEC13P55735 322 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 SRSF11Q05519 484 aaKnown RBP6.79□□□□□ -1.32
ATXN3-230ENST00000554673 RAD51AP2Q09MP3 1159 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 ANKRD1Q15327 319 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 DLGAP5Q15398 846 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 IL17AQ16552 155 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 RTN1Q16799 776 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 KIF4BQ2VIQ3 1234 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 SOGA3Q5TF21 947 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 ANGEL2Q5VTE6 544 aaKnown RBP6.79□□□□□ -1.32
ATXN3-230ENST00000554673 FKBP1CQ5VVH2 108 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 LARP1BQ659C4 914 aaKnown RBP6.79□□□□□ -1.32
ATXN3-230ENST00000554673 WWC2Q6AWC2 1192 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 PDXDC2PQ6P474 469 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 USP48Q86UV5 1035 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 DGKHQ86XP1 1220 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 RASGRP4Q8TDF6 673 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 GTF3C2Q8WUA4 911 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-230ENST00000554673 PIK3R5Q8WYR1 880 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 GPKOWQ92917 476 aaPredicted RBP eCLIP6.79□□□□□ -1.32
ATXN3-230ENST00000554673 MKL1Q969V6 931 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 WNK4Q96J92 1243 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 KCTD15Q96SI1 283 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-230ENST00000554673 SPOCK3Q9BQ16 436 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 ANP32EQ9BTT0 268 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 UBA5Q9GZZ9 404 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 ENAMQ9NRM1 1142 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 TOMM22Q9NS69 142 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 RNF181Q9P0P0 153 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 VPS54Q9P1Q0 977 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 TMEM63CQ9P1W3 806 aa6.79□□□□□ -1.32
ATXN3-230ENST00000554673 PLXNB2O15031 1838 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 DOCK3Q8IZD9 2030 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 TSPY2A6NKD2 308 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 BTBD18B2RXH4 712 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 STXBP3O00186 592 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 PRPF3O43395 683 aaKnown RBP6.78□□□□□ -1.32
ATXN3-230ENST00000554673 EIF5BO60841 1220 aaKnown RBP6.78□□□□□ -1.32
ATXN3-230ENST00000554673 DDAH1O94760 285 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 GH2P01242 217 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 PCP11498 1178 aaKnown RBP6.78□□□□□ -1.32
ATXN3-230ENST00000554673 LIG1P18858 919 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 SLC16A2P36021 539 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 RBM5P52756 815 aaKnown RBP eCLIP6.78□□□□□ -1.32
ATXN3-230ENST00000554673 RCAN1P53805 252 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 ZNF543Q08ER8 600 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 AXDND1Q5T1B0 1012 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-230ENST00000554673 IFIT1BQ5T764 474 aaKnown RBP6.78□□□□□ -1.32
ATXN3-230ENST00000554673 MCTP1Q6DN14 999 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 USP49Q70CQ1 688 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 FAM83AQ86UY5 434 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 RNF217Q8TC41 542 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 NUP133Q8WUM0 1156 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 SLC10A4Q96EP9 437 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 ALG1Q9BT22 464 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 PHF20Q9BVI0 1012 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 SLC26A6Q9BXS9 759 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 RNF41Q9H4P4 317 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-230ENST00000554673 RIOX1Q9H6W3 641 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 JMJD4Q9H9V9 463 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 FBXO28Q9NVF7 368 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 GGA3Q9NZ52 723 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 SEPT3Q9UH03 358 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 ZNF112Q9UJU3 913 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 ZBTB21Q9ULJ3 1066 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 PCDHB9Q9Y5E1 797 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 CLIC4Q9Y696 253 aa6.78□□□□□ -1.32
ATXN3-230ENST00000554673 A0A087WWV3 80 aa6.77□□□□□ -1.33
ATXN3-230ENST00000554673 VPS37CA5D8V6 355 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-230ENST00000554673 NDUFB10O96000 172 aa6.77□□□□□ -1.33
ATXN3-230ENST00000554673 P4HBP07237 508 aaKnown RBP6.77□□□□□ -1.33
ATXN3-230ENST00000554673 TOP1P11387 765 aaKnown RBP6.77□□□□□ -1.33
ATXN3-230ENST00000554673 RPS12P25398 132 aaKnown RBP6.77□□□□□ -1.33
ATXN3-230ENST00000554673 U2AF2P26368 475 aaKnown RBP eCLIP6.77□□□□□ -1.33
ATXN3-230ENST00000554673 RAB15P59190 212 aa6.77□□□□□ -1.33
ATXN3-230ENST00000554673 PTK2Q05397 1052 aa6.77□□□□□ -1.33
ATXN3-230ENST00000554673 MOGSQ13724 837 aa6.77□□□□□ -1.33
ATXN3-230ENST00000554673 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-230ENST00000554673 KCTD1Q719H9 257 aa6.77□□□□□ -1.33
ATXN3-230ENST00000554673 GPC2Q8N158 579 aa6.77□□□□□ -1.33
ATXN3-230ENST00000554673 C4orf32Q8N8J7 132 aa6.77□□□□□ -1.33
ATXN3-230ENST00000554673 LEO1Q8WVC0 666 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-230ENST00000554673 PIBF1Q8WXW3 757 aa6.77□□□□□ -1.33
ATXN3-230ENST00000554673 TBC1D5Q92609 795 aa6.77□□□□□ -1.33
ATXN3-230ENST00000554673 PIGSQ96S52 555 aa6.77□□□□□ -1.33
ATXN3-230ENST00000554673 CSRNP1Q96S65 589 aa6.77□□□□□ -1.33
ATXN3-230ENST00000554673 ARHGAP9Q9BRR9 750 aa6.77□□□□□ -1.33
ATXN3-230ENST00000554673 VEZTQ9HBM0 779 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms