RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 GABRQQ9UN88 632 aa6.09□□□□□ -1.43
ATXN3-229ENST00000554672 BRCA2P51587 3418 aa6.09□□□□□ -1.44
ATXN3-229ENST00000554672 HMX2A2RU54 273 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 TNPO2O14787 897 aaKnown RBP6.08□□□□□ -1.44
ATXN3-229ENST00000554672 CYP2C8P10632 490 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 PCSK2P16519 638 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 MAGEA10P43363 369 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-229ENST00000554672 CD97P48960 835 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 ALKBH2Q6NS38 261 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 HHIPL2Q6UWX4 724 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 LMBR1LQ6UX01 489 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 G2E3Q7L622 706 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 VN1R5Q7Z5H4 357 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 VPS37DQ86XT2 251 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 TRIM42Q8IWZ5 723 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 C7orf61Q8IZ16 206 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 TSPYL6Q8N831 410 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 FAM151AQ8WW52 585 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 DNAAF4Q8WXU2 420 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 UTP4Q969X6 686 aaKnown RBP6.08□□□□□ -1.44
ATXN3-229ENST00000554672 COA7Q96BR5 231 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 MYRFLQ96LU7 910 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 OSMRQ99650 979 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 C7orf69Q9H7B7 122 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 SLC45A1Q9Y2W3 748 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 SUGT1Q9Y2Z0 365 aa6.08□□□□□ -1.44
ATXN3-229ENST00000554672 CENPFP49454 3210 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 RPTORQ8N122 1335 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 APAF1O14727 1248 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 FRAT2O75474 233 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-229ENST00000554672 TGFB1P01137 390 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 PREPP48147 710 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 NLRP12P59046 1061 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 UVSSAQ2YD98 709 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 CAVIN4Q5BKX8 364 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 NOL9Q5SY16 702 aaKnown RBP6.07□□□□□ -1.44
ATXN3-229ENST00000554672 PEAR1Q5VY43 1037 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-229ENST00000554672 KRTAP1-3Q8IUG1 177 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 ZDHHC13Q8IUH4 622 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 SLC7A3Q8WY07 619 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 PMEPA1Q969W9 287 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.07□□□□□ -1.441e-11■■■■□ 25.2
ATXN3-229ENST00000554672 C11orf49Q9H6J7 331 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 LATS2Q9NRM7 1088 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 PCMTD2Q9NV79 361 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 ZHX2Q9Y6X8 837 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 CEP290O15078 2479 aa6.07□□□□□ -1.44
ATXN3-229ENST00000554672 MYBBP1AQ9BQG0 1328 aaKnown RBP6.06□□□□□ -1.44
ATXN3-229ENST00000554672 A0A0G2JLL6 359 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-229ENST00000554672 PHACTR2O75167 634 aa6.06□□□□□ -1.44
ATXN3-229ENST00000554672 FAM13AO94988 1023 aa6.06□□□□□ -1.44
ATXN3-229ENST00000554672 SYN1P17600 705 aa6.06□□□□□ -1.44
ATXN3-229ENST00000554672 NFIAQ12857 509 aa6.06□□□□□ -1.44
ATXN3-229ENST00000554672 CHAF1AQ13111 956 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-229ENST00000554672 ECM1Q16610 540 aa6.06□□□□□ -1.44
ATXN3-229ENST00000554672 TWISTNBQ3B726 338 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-229ENST00000554672 PRRT2Q7Z6L0 340 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-229ENST00000554672 FAM20CQ8IXL6 584 aa6.06□□□□□ -1.44
ATXN3-229ENST00000554672 SMCR8Q8TEV9 937 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-229ENST00000554672 DIS3LQ8TF46 1054 aaKnown RBP6.06□□□□□ -1.44
ATXN3-229ENST00000554672 BSNDQ8WZ55 320 aa6.06□□□□□ -1.44
ATXN3-229ENST00000554672 ANO2Q9NQ90 1003 aa6.06□□□□□ -1.44
ATXN3-229ENST00000554672 PICK1Q9NRD5 415 aa6.06□□□□□ -1.44
ATXN3-229ENST00000554672 OGDHLQ9ULD0 1010 aa6.06□□□□□ -1.44
ATXN3-229ENST00000554672 A0A0C4DFX4 3053 aa6.06□□□□□ -1.44
ATXN3-229ENST00000554672 PSME4Q14997 1843 aa6.06□□□□□ -1.44
ATXN3-229ENST00000554672 RANBP2P49792 3224 aaKnown RBP6.06□□□□□ -1.44
ATXN3-229ENST00000554672 DLG5Q8TDM6 1919 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 MAST3O60307 1309 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 MROH5Q6ZUA9 1318 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 MEGF11A6BM72 1044 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 PRR19A6NJB7 356 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 DLGAP3O95886 979 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 HMGCRP04035 888 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 C19orf57Q0VDD7 668 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 TCP10Q12799 353 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 ZNF211Q13398 564 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-229ENST00000554672 AAMPQ13685 434 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 EPHA10Q5JZY3 1008 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 BEND3Q5T5X7 828 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 RNF43Q68DV7 783 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 GADL1Q6ZQY3 521 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 GJD3Q8N144 294 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 TTC16Q8NEE8 873 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 GUCD1Q96NT3 240 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 FAM83CQ9BQN1 747 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 C9orf78Q9NZ63 289 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-229ENST00000554672 GJD2Q9UKL4 321 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 AFG3L2Q9Y4W6 797 aa6.05□□□□□ -1.44
ATXN3-229ENST00000554672 RPAP1Q9BWH6 1393 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-229ENST00000554672 KIAA1324LA8MWY0 1029 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-229ENST00000554672 GRM8O00222 908 aa6.04□□□□□ -1.44
ATXN3-229ENST00000554672 GSC2O15499 205 aa6.04□□□□□ -1.44
ATXN3-229ENST00000554672 ADAMTS4O75173 837 aa6.04□□□□□ -1.44
ATXN3-229ENST00000554672 BMP3P12645 472 aa6.04□□□□□ -1.44
ATXN3-229ENST00000554672 EDN3P14138 238 aa6.04□□□□□ -1.44
ATXN3-229ENST00000554672 GCLCP48506 637 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-229ENST00000554672 FAM110CQ1W6H9 321 aa6.04□□□□□ -1.44
ATXN3-229ENST00000554672 ANKRD34AQ69YU3 496 aa6.04□□□□□ -1.44
ATXN3-229ENST00000554672 CDC42EP5Q6NZY7 148 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms