RNA–Protein interactions for RNA: ENST00000554444.5

TUBB3-206, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 1,978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-206ENST00000554444 TANGO6Q9C0B7 1094 aa17.8■□□□□ 0.44
TUBB3-206ENST00000554444 CCPG1Q9ULG6 757 aa17.8■□□□□ 0.44
TUBB3-206ENST00000554444 AFG3L2Q9Y4W6 797 aa17.8■□□□□ 0.44
TUBB3-206ENST00000554444 MYH7BA7E2Y1 1941 aa17.8■□□□□ 0.44
TUBB3-206ENST00000554444 DYNC1I1O14576 645 aa17.8■□□□□ 0.44
TUBB3-206ENST00000554444 NRDCO43847 1150 aa17.8■□□□□ 0.44
TUBB3-206ENST00000554444 RPN1P04843 607 aaKnown RBP17.8■□□□□ 0.44
TUBB3-206ENST00000554444 FDX1P10109 184 aa17.8■□□□□ 0.44
TUBB3-206ENST00000554444 HSD17B4P51659 736 aa17.8■□□□□ 0.44
TUBB3-206ENST00000554444 FMR1Q06787 632 aaKnown RBP eCLIP17.8■□□□□ 0.44
TUBB3-206ENST00000554444 SEMA3FQ13275 785 aa17.8■□□□□ 0.44
TUBB3-206ENST00000554444 ARID5BQ14865 1188 aa17.8■□□□□ 0.44
TUBB3-206ENST00000554444 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.8■□□□□ 0.44
TUBB3-206ENST00000554444 SULF1Q8IWU6 871 aa17.8■□□□□ 0.44
TUBB3-206ENST00000554444 PPP1R3GB7ZBB8 358 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 CD44P16070 742 aaKnown RBP17.79■□□□□ 0.44
TUBB3-206ENST00000554444 GTF2F1P35269 517 aaKnown RBP eCLIP17.79■□□□□ 0.44
TUBB3-206ENST00000554444 PRR16Q569H4 304 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 KRT79Q5XKE5 535 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 USP50Q70EL3 339 aaPredicted RBP17.79■□□□□ 0.44
TUBB3-206ENST00000554444 FAM20AQ96MK3 541 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 BLOC1S4Q9NUP1 217 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 SMCHD1A6NHR9 2005 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 IGLV3-22A0A075B6J6 115 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 KLRC4O43908 158 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 MARCH6O60337 910 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 SFPQP23246 707 aaKnown RBP eCLIP17.79■□□□□ 0.44
TUBB3-206ENST00000554444 MAP3K9P80192 1104 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 HYIQ5T013 277 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 VSTM4Q8IW00 320 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 CYP2W1Q8TAV3 490 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 ZC3H15Q8WU90 426 aaKnown RBP17.79■□□□□ 0.44
TUBB3-206ENST00000554444 C7orf25Q9BPX7 421 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 RMND1Q9NWS8 449 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 STK17AQ9UEE5 414 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 ADAMTS5Q9UNA0 930 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 NFE2L3Q9Y4A8 694 aa17.79■□□□□ 0.44
TUBB3-206ENST00000554444 DOCK1Q14185 1865 aa17.78■□□□□ 0.44
TUBB3-206ENST00000554444 ADM5C9JUS6 153 aa17.78■□□□□ 0.44
TUBB3-206ENST00000554444 VWA5AO00534 786 aa17.78■□□□□ 0.44
TUBB3-206ENST00000554444 HMGCS2P54868 508 aa17.78■□□□□ 0.44
TUBB3-206ENST00000554444 SPIRE1Q08AE8 756 aa17.78■□□□□ 0.44
TUBB3-206ENST00000554444 KCNB1Q14721 858 aa17.78■□□□□ 0.44
TUBB3-206ENST00000554444 TMEM119Q4V9L6 283 aa17.78■□□□□ 0.44
TUBB3-206ENST00000554444 RAVER2Q9HCJ3 691 aaKnown RBP17.78■□□□□ 0.44
TUBB3-206ENST00000554444 PNMA2Q9UL42 364 aa17.78■□□□□ 0.44
TUBB3-206ENST00000554444 PRKG1Q13976 671 aa17.77■□□□□ 0.44
TUBB3-206ENST00000554444 ECM1Q16610 540 aa17.77■□□□□ 0.44
TUBB3-206ENST00000554444 SH3D19Q5HYK7 790 aa17.77■□□□□ 0.44
TUBB3-206ENST00000554444 ZNF658Q5TYW1 1059 aaPredicted RBP17.77■□□□□ 0.44
TUBB3-206ENST00000554444 ARMCX5Q6P1M9 558 aa17.77■□□□□ 0.44
TUBB3-206ENST00000554444 SAMD3Q8N6K7 520 aa17.77■□□□□ 0.44
TUBB3-206ENST00000554444 SNX29Q8TEQ0 813 aa17.77■□□□□ 0.44
TUBB3-206ENST00000554444 TRIM9Q9C026 710 aa17.77■□□□□ 0.44
TUBB3-206ENST00000554444 SNCAIPQ9Y6H5 919 aa17.77■□□□□ 0.44
TUBB3-206ENST00000554444 GLTPD2A6NH11 291 aa17.77■□□□□ 0.43
TUBB3-206ENST00000554444 NFIBO00712 420 aa17.77■□□□□ 0.43
TUBB3-206ENST00000554444 MSH4O15457 936 aa17.77■□□□□ 0.43
TUBB3-206ENST00000554444 SLC26A4O43511 780 aa17.77■□□□□ 0.43
TUBB3-206ENST00000554444 ZBED4O75132 1171 aa17.77■□□□□ 0.43
TUBB3-206ENST00000554444 AMPD3Q01432 767 aa17.77■□□□□ 0.43
TUBB3-206ENST00000554444 VGLL4Q14135 290 aa17.77■□□□□ 0.43
TUBB3-206ENST00000554444 KRT26Q7Z3Y9 468 aa17.77■□□□□ 0.43
TUBB3-206ENST00000554444 MCF2L2Q86YR7 1114 aa17.77■□□□□ 0.43
TUBB3-206ENST00000554444 CPXCR1Q8N123 301 aa17.77■□□□□ 0.43
TUBB3-206ENST00000554444 CCDC112Q8NEF3 446 aa17.77■□□□□ 0.43
TUBB3-206ENST00000554444 MAP3K20Q9NYL2 800 aaKnown RBP17.77■□□□□ 0.43
TUBB3-206ENST00000554444 ZC3H4Q9UPT8 1303 aaKnown RBP17.76■□□□□ 0.43
TUBB3-206ENST00000554444 PPP1R12BO60237 982 aaPredicted RBP17.76■□□□□ 0.43
TUBB3-206ENST00000554444 RHOBTB3O94955 611 aa17.76■□□□□ 0.43
TUBB3-206ENST00000554444 EPHX2P34913 555 aa17.76■□□□□ 0.43
TUBB3-206ENST00000554444 SPATA1Q5VX52 437 aa17.76■□□□□ 0.43
TUBB3-206ENST00000554444 CATSPERGQ6ZRH7 1159 aa17.76■□□□□ 0.43
TUBB3-206ENST00000554444 SMYD4Q8IYR2 804 aaPredicted RBP17.76■□□□□ 0.43
TUBB3-206ENST00000554444 REPS2Q8NFH8 660 aa17.76■□□□□ 0.43
TUBB3-206ENST00000554444 DSG3P32926 999 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 ZNF76P36508 570 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 COG2Q14746 738 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 GPR162Q16538 588 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 TPD52L1Q16890 204 aaPredicted RBP17.75■□□□□ 0.43
TUBB3-206ENST00000554444 KMT5BQ4FZB7 885 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 SV2BQ7L1I2 683 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 RBM46Q8TBY0 533 aaKnown RBP17.75■□□□□ 0.43
TUBB3-206ENST00000554444 ATG4CQ96DT6 458 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 WNK4Q96J92 1243 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 EHMT1Q9H9B1 1298 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 COL20A1Q9P218 1284 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 POLR2AP24928 1970 aaKnown RBP17.75■□□□□ 0.43
TUBB3-206ENST00000554444 SYNRGQ9UMZ2 1314 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 ALAS1P13196 640 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 MUM1L1Q5H9M0 696 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 CNNM4Q6P4Q7 775 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 KCNK18Q7Z418 384 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 CCAR2Q8N163 923 aaKnown RBP17.75■□□□□ 0.43
TUBB3-206ENST00000554444 LARP4BQ92615 738 aaKnown RBP17.75■□□□□ 0.43
TUBB3-206ENST00000554444 RAD54LQ92698 747 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 CDK5RAP3Q96JB5 506 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 UIMC1Q96RL1 719 aa17.75■□□□□ 0.43
TUBB3-206ENST00000554444 RPTORQ8N122 1335 aa17.74■□□□□ 0.43
TUBB3-206ENST00000554444 MEIS1O00470 390 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms