RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 OPLAHO14841 1288 aa21.78■■□□□ 1.08
CPSF2-203ENST00000554290 SGSM2O43147 1006 aa21.78■■□□□ 1.08
CPSF2-203ENST00000554290 PPP1R11O60927 126 aaPredicted RBP21.78■■□□□ 1.08
CPSF2-203ENST00000554290 ATP2A2P16615 1042 aaKnown RBP21.78■■□□□ 1.08
CPSF2-203ENST00000554290 LAMC2Q13753 1193 aa21.78■■□□□ 1.08
CPSF2-203ENST00000554290 WTAPQ15007 396 aa21.78■■□□□ 1.08
CPSF2-203ENST00000554290 PTGISQ16647 500 aa21.78■■□□□ 1.08
CPSF2-203ENST00000554290 KCNV1Q6PIU1 500 aa21.78■■□□□ 1.08
CPSF2-203ENST00000554290 STOX1Q6ZVD7 989 aa21.78■■□□□ 1.08
CPSF2-203ENST00000554290 HOMER1Q86YM7 354 aa21.78■■□□□ 1.08
CPSF2-203ENST00000554290 VWCEQ96DN2 955 aa21.78■■□□□ 1.08
CPSF2-203ENST00000554290 PCDHA11Q9Y5I1 949 aa21.78■■□□□ 1.08
CPSF2-203ENST00000554290 SCN10AQ9Y5Y9 1956 aa21.78■■□□□ 1.08
CPSF2-203ENST00000554290 IQCF3P0C7M6 154 aa21.77■■□□□ 1.08
CPSF2-203ENST00000554290 MYCLP12524 364 aaPredicted RBP21.77■■□□□ 1.08
CPSF2-203ENST00000554290 IRX6P78412 446 aaPredicted RBP21.77■■□□□ 1.08
CPSF2-203ENST00000554290 CATIPQ7Z7H3 387 aa21.77■■□□□ 1.08
CPSF2-203ENST00000554290 SESTD1Q86VW0 696 aa21.77■■□□□ 1.08
CPSF2-203ENST00000554290 DHX37Q8IY37 1157 aaKnown RBP21.77■■□□□ 1.08
CPSF2-203ENST00000554290 EMID1Q96A84 441 aaPredicted RBP21.77■■□□□ 1.08
CPSF2-203ENST00000554290 PDCD2LQ9BRP1 358 aa21.77■■□□□ 1.08
CPSF2-203ENST00000554290 RIOX1Q9H6W3 641 aa21.77■■□□□ 1.08
CPSF2-203ENST00000554290 YBX2Q9Y2T7 364 aaKnown RBP21.77■■□□□ 1.08
CPSF2-203ENST00000554290 GCOM1H8Y6P7 765 aaPredicted RBP21.76■■□□□ 1.07
CPSF2-203ENST00000554290 POLR2MP0CAP2 368 aa21.76■■□□□ 1.07
CPSF2-203ENST00000554290 HOXA13P31271 388 aaPredicted RBP21.76■■□□□ 1.07
CPSF2-203ENST00000554290 TMEM67Q5HYA8 995 aa21.76■■□□□ 1.07
CPSF2-203ENST00000554290 KAT2BQ92831 832 aa21.76■■□□□ 1.07
CPSF2-203ENST00000554290 MAP4K1Q92918 833 aa21.76■■□□□ 1.07
CPSF2-203ENST00000554290 PIGSQ96S52 555 aa21.76■■□□□ 1.07
CPSF2-203ENST00000554290 KATNAL1Q9BW62 490 aa21.76■■□□□ 1.07
CPSF2-203ENST00000554290 FTOQ9C0B1 505 aaKnown RBP eCLIP21.76■■□□□ 1.07
CPSF2-203ENST00000554290 PNMA6FA0A0J9YX94 578 aa21.75■■□□□ 1.07
CPSF2-203ENST00000554290 RABGGTBP53611 331 aa21.75■■□□□ 1.07
CPSF2-203ENST00000554290 TROAPQ12815 778 aa21.75■■□□□ 1.07
CPSF2-203ENST00000554290 VSIG10LQ86VR7 867 aa21.75■■□□□ 1.07
CPSF2-203ENST00000554290 C7orf31Q8N865 590 aa21.75■■□□□ 1.07
CPSF2-203ENST00000554290 PPTC7Q8NI37 304 aa21.75■■□□□ 1.07
CPSF2-203ENST00000554290 CAGE1Q8TC20 777 aa21.75■■□□□ 1.07
CPSF2-203ENST00000554290 SYMPKQ92797 1274 aaKnown RBP21.75■■□□□ 1.07
CPSF2-203ENST00000554290 CUL9Q8IWT3 2517 aa21.75■■□□□ 1.07
CPSF2-203ENST00000554290 PGM5Q15124 567 aa21.74■■□□□ 1.07
CPSF2-203ENST00000554290 PPP2R2DQ66LE6 453 aa21.74■■□□□ 1.07
CPSF2-203ENST00000554290 GDF6Q6KF10 455 aaPredicted RBP21.74■■□□□ 1.07
CPSF2-203ENST00000554290 AFAP1L1Q8TED9 768 aa21.74■■□□□ 1.07
CPSF2-203ENST00000554290 SENP2Q9HC62 589 aa21.74■■□□□ 1.07
CPSF2-203ENST00000554290 TAF6LQ9Y6J9 622 aa21.74■■□□□ 1.07
CPSF2-203ENST00000554290 UNC80Q8N2C7 3258 aa21.73■■□□□ 1.07
CPSF2-203ENST00000554290 MYH6P13533 1939 aa21.73■■□□□ 1.07
CPSF2-203ENST00000554290 TGFB3P10600 412 aa21.73■■□□□ 1.07
CPSF2-203ENST00000554290 IGFBP4P22692 258 aa21.73■■□□□ 1.07
CPSF2-203ENST00000554290 CCND2P30279 289 aa21.73■■□□□ 1.07
CPSF2-203ENST00000554290 PSEN2P49810 448 aa21.73■■□□□ 1.07
CPSF2-203ENST00000554290 SLC35G1Q2M3R5 365 aa21.73■■□□□ 1.07
CPSF2-203ENST00000554290 FCHSD1Q86WN1 690 aa21.73■■□□□ 1.07
CPSF2-203ENST00000554290 USP38Q8NB14 1042 aa21.73■■□□□ 1.07
CPSF2-203ENST00000554290 PHOSPHO2Q8TCD6 241 aa21.73■■□□□ 1.07
CPSF2-203ENST00000554290 PPM1EQ8WY54 764 aa21.73■■□□□ 1.07
CPSF2-203ENST00000554290 SLC9A7Q96T83 725 aa21.73■■□□□ 1.07
CPSF2-203ENST00000554290 GTF2IRD1Q9UHL9 959 aa21.73■■□□□ 1.07
CPSF2-203ENST00000554290 CYTH3O43739 400 aa21.72■■□□□ 1.07
CPSF2-203ENST00000554290 PPFIA4O75335 1185 aa21.72■■□□□ 1.07
CPSF2-203ENST00000554290 RGS20O76081 388 aa21.72■■□□□ 1.07
CPSF2-203ENST00000554290 PARNO95453 639 aaKnown RBP21.72■■□□□ 1.07
CPSF2-203ENST00000554290 CELF3Q5SZQ8 465 aaKnown RBP21.72■■□□□ 1.07
CPSF2-203ENST00000554290 MYSM1Q5VVJ2 828 aa21.72■■□□□ 1.07
CPSF2-203ENST00000554290 IGDCC4Q8TDY8 1250 aa21.72■■□□□ 1.07
CPSF2-203ENST00000554290 ALG1Q9BT22 464 aa21.72■■□□□ 1.07
CPSF2-203ENST00000554290 RBM8AQ9Y5S9 174 aaKnown RBP21.72■■□□□ 1.07
CPSF2-203ENST00000554290 BAIAP3O94812 1187 aa21.71■■□□□ 1.07
CPSF2-203ENST00000554290 F2P00734 622 aa21.71■■□□□ 1.07
CPSF2-203ENST00000554290 MYOGP15173 224 aa21.71■■□□□ 1.07
CPSF2-203ENST00000554290 SELPP16109 830 aa21.71■■□□□ 1.07
CPSF2-203ENST00000554290 KIF5BP33176 963 aa21.71■■□□□ 1.07
CPSF2-203ENST00000554290 MFSD10Q14728 455 aa21.71■■□□□ 1.07
CPSF2-203ENST00000554290 KIAA0753Q2KHM9 967 aa21.71■■□□□ 1.07
CPSF2-203ENST00000554290 MB21D2Q8IYB1 491 aaPredicted RBP21.71■■□□□ 1.07
CPSF2-203ENST00000554290 CTCFLQ8NI51 663 aaPredicted RBP21.71■■□□□ 1.07
CPSF2-203ENST00000554290 SPATA33Q96N06 139 aa21.71■■□□□ 1.07
CPSF2-203ENST00000554290 CTAGE1Q96RT6 745 aa21.71■■□□□ 1.07
CPSF2-203ENST00000554290 MAP3K14Q99558 947 aa21.71■■□□□ 1.07
CPSF2-203ENST00000554290 HDAC6Q9UBN7 1215 aa21.71■■□□□ 1.07
CPSF2-203ENST00000554290 KIAA1217Q5T5P2 1943 aa21.7■■□□□ 1.07
CPSF2-203ENST00000554290 KIF28PB7ZC32 967 aa21.7■■□□□ 1.06
CPSF2-203ENST00000554290 HAS3O00219 553 aa21.7■■□□□ 1.06
CPSF2-203ENST00000554290 GGPS1O95749 300 aa21.7■■□□□ 1.06
CPSF2-203ENST00000554290 ZNF286BP0CG31 522 aa21.7■■□□□ 1.06
CPSF2-203ENST00000554290 ANTXR2P58335 489 aa21.7■■□□□ 1.06
CPSF2-203ENST00000554290 RBL2Q08999 1139 aa21.7■■□□□ 1.06
CPSF2-203ENST00000554290 ADGRE1Q14246 886 aa21.7■■□□□ 1.06
CPSF2-203ENST00000554290 CASC1Q6TDU7 716 aa21.7■■□□□ 1.06
CPSF2-203ENST00000554290 IL31RAQ8NI17 732 aa21.7■■□□□ 1.06
CPSF2-203ENST00000554290 MTA3Q9BTC8 594 aa21.7■■□□□ 1.06
CPSF2-203ENST00000554290 MLXIPQ9HAP2 919 aa21.7■■□□□ 1.06
CPSF2-203ENST00000554290 CHD9Q3L8U1 2897 aa21.7■■□□□ 1.06
CPSF2-203ENST00000554290 HOXD8P13378 290 aaPredicted RBP21.69■■□□□ 1.06
CPSF2-203ENST00000554290 KCNJ6P48051 423 aa21.69■■□□□ 1.06
CPSF2-203ENST00000554290 PTK7Q13308 1070 aa21.69■■□□□ 1.06
CPSF2-203ENST00000554290 HSDL1Q3SXM5 330 aa21.69■■□□□ 1.06
CPSF2-203ENST00000554290 TJAP1Q5JTD0 557 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms